Pomacea canaliculata (golden apple snail): 112558702
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Entry
112558702 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: low-density lipoprotein receptor-related protein 6-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan04150
mTOR signaling pathway
pcan04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112558702
04150 mTOR signaling pathway
112558702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcan04131
]
112558702
Membrane trafficking [BR:
pcan04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
112558702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
DUF5050
Ldl_recept_a
SGL
Vgb_lyase
EGF_LRP2
cEGF
ASFV_J13L
Psg1
EphA2_TM
Protocadherin
Motif
Other DBs
NCBI-GeneID:
112558702
NCBI-ProteinID:
XP_025085086
LinkDB
All DBs
Position
LG3:4897099..4927547
Genome browser
AA seq
1604 aa
AA seq
DB search
MGIVTRLFAVTWILSVCYGSPFLLFANRKDVRIIDATDPRPNSSVIISNLKDAAAVDFIH
SEGWIFWTDVSLEVIERTSINSSHTSVSVISTGIVSPDGLACDWLGKKLYWTDSETNRIE
VSNLDGTFRKVLFWRRLDQPRAIALDPQNGYVYWTDWGEMPKIERAGMDGNQDSREIIVA
DNIFWPNGLTLDYEDSKIYWVDAKLHYIHSCDFDGSNRRAVVEGNLPHPFALTLFEETIY
WTDWQTRSIHACNKRTSAEMMVLHEDIFSPMDIHSFEAKRQPSEFRNTGGVNPCGNNNGG
CSHLCLMSPRPPFYSCACPTGVRLLQDGKTCAQGAEKILFLARRRDLRKISLDTLDYTAV
VLPLTDVRHAIAVDYDPVEDYVYWTDDETRAIQRSRLDGSGQEMLVRTEVDHPDGIAIDW
IGRNLYWTDTGMDRIEVXQLNGSARKVLIADQLDEPRAICLDPQSGYMYWSDWGKQPKIE
RANLDGTDRITLVDTNLGWPNGLAVDLSVGRLYWGDAKTDHIETSDLMGGDRRILVSENL
PHIFGFTLIGDFIYWTDWQRRSIERVNKTTGLQREKIIDQLPDLMGLKAVDVHKREGTNP
CASNNNGCSHLCLYRPPPKGPVCACPMGFELVSNGSTCIVPEAFLLFSSQSNINRISLQT
SHYNQPIPIQGVKQAVAIDFHFKENRIYVTDVSSKRISRAFMNGSSLEHIIEFGLNYAEG
MAVDWVANNIYWADTNKNRIEVARLDGSSRKVLIWRQLDNPRALALDPPSGYMYWSMWGE
EPQLVRANLDGTQRRVLITGQGRIQDLTIDYVDRRLYWADIDQHNIQSSDLLGGDKRLIV
PSNLPHPMGITQYEDYIYWTDFDSKSIERANKMTGKDRSLIQEGVDYALDISVIHASRQS
GHNSCGSNNGGCSHLCLAHSVDHKDNRTHHCACPTHYHLNSDDKTCSGKSNKYSFWSAGN
LFVKALAYDPGQQQIYWIEGRQKMIKRAPDHGSTVEVLLNSANGQMQPYDIAIDPFSRTL
YWTCSNHNVINVTRLDMTPVGVVLQGPSNFKPRSLVLFPERGYMFYTNMVKSPRIESARM
DGSEKTELFIKGLVQPVSLTIDKTEGKLYWVDAGKNRIEMSDLTGGNHRVLVDGHLVAPR
GLAVHGQFLYWLDRDQQLLERCQKKTGAKRLWVRGRMQGLSDLIAVQHSLDVTSHPCAVG
NGGCSHICMVDSDIKARCSCPYNLVLKKDGLTCADPPTCPPDHFTCKSGGITCIPLVWRC
DNLSECEDSSDEQDCPICGPTQFHCQSGECVSKDNQCDGTANCKDGSDERGCCAGVPCAS
CESQGQGACAPGELRDCSEGEAKCVHQPTVDKVHHNATHYAIAIVVGVIFLIVIIVVILF
CRRKTRHVPFTDDDIQMAKKPLNPQTSGEPPPPQSHTLSSRGGKTSASGGLSLGGTSLAS
GLPPFYDRSHVTGASSSSSTGTQYPQETLNPPPSPVTERSVYTGGGHYCSSQSVGTVRSA
RRQHKPHRSRHHHHHHHSHIPPPPTTPCSTDVCDDSEPYPAKRFRYYFNNSLVELSYDSD
PYPPPPTPRRYFSDDVSCPPSPSTERSYFNPYPPPPSPVGNSDC
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atggggatagtcacgaggcttttcgcagtgacttggattttatcagtttgttatgggtca
ccattcttactctttgccaatcgaaaagatgtacgcatcattgatgctacagatccccga
ccaaactcctcagttattattagcaacttgaaggatgcagcagctgttgattttatccat
agtgaaggctggatcttctggactgatgttagtcttgaggtcattgaacgcacttctatt
aacagttctcataccagtgtcagtgtcatctccactggaattgtgtcacctgatggacta
gcttgtgattggctggggaaaaagctgtactggactgactctgagaccaatcgcattgaa
gttagtaatctggatggcacattcagaaaagttttgttctggcgacgcttggaccagcca
agggccattgcacttgatccacagaatggatatgtatattggacggactggggtgaaatg
ccaaaaattgaaagagctggtatggatggcaatcaggactctcgagagataattgtggct
gacaacatcttctggcctaatggtctaacactcgattatgaagattccaaaatttattgg
gtggatgcaaagctgcactatattcacagctgtgattttgatggatctaatcgccgtgct
gttgttgaaggaaatctcccacatccatttgcattgactttattcgaagagacaatttat
tggacagactggcagacaaggtctattcatgcatgcaataaacggacttcagcagagatg
atggttctgcatgaagatattttctcaccgatggatattcactcctttgaagccaaacgt
cagccttcagagttccggaacacaggaggtgttaatccatgtggaaacaacaatggtggc
tgctcacatctgtgtctgatgtcgcctcgcccccctttctacagctgtgcttgccccaca
ggtgttaggctcctccaggatggcaaaacttgtgcacaaggtgccgaaaaaattttgttc
ttggctagaagacgagatttgcgcaagatttctcttgatacactagactacacagccgtt
gttcttccccttactgatgttcgtcatgcaatagctgttgactatgatccagtagaagat
tatgtctattggacagacgatgaaacaagagcaatccaacgatccaggctggatggctct
ggtcaagaaatgctggtcagaacagaagtggatcatcctgatggcattgctatcgactgg
attgggcgcaacctttactggacggacacaggcatggatcgtattgaggttngtcagctg
aatggctcggcaagaaaagttctcattgcagaccagcttgatgaacctcgtgccatctgt
ctggatcctcagtcaggttacatgtactggtcagactggggaaaacagccaaaaatagag
agggccaacttggatgggacagaccgcatcacattggtggatacaaatttgggttggccc
aatggtttggctgttgatctgagtgttggtcgactctactggggagacgctaaaaccgac
catattgaaacatcagatctgatgggtggtgatcggcgtattttggtctctgaaaatctt
cctcatatttttggcttcacgctgataggtgacttcatctactggacagactggcagcgt
cgttcgattgaacgtgttaataagacaacaggactacaaagagagaagataatagaccag
ctgccagatcttatgggattgaaagctgtggatgtacacaaacgggaaggcaccaaccca
tgtgcaagcaacaacaatggctgcagtcacctgtgtctgtatcggccaccacctaagggg
ccagtgtgtgcatgcccaatgggctttgagcttgtcagcaatggcagcacatgcattgtt
ccggaggctttccttctgttctcttctcagtccaacatcaaccgcatttctttgcaaact
agccactacaaccaacccattcctatccagggtgtcaagcaggcagttgccattgacttt
cacttcaaggaaaaccgtatctatgtcactgatgtcagttccaagcgcatcagtcgagca
ttcatgaatggttcttccttggagcatatcattgagttcgggctgaattatgctgaaggt
atggcagtagattgggtggcaaacaacatctattgggccgacaccaataagaaccgcatt
gaagtggctcgactggatggatcatcacgtaaagtgcttatctggcgacaactagacaac
cctcgggcccttgcactggatccaccctccgggtacatgtactggtctatgtggggggaa
gaaccacagttggtgcgtgcaaatctggatggaactcaacgccgagtgttaatcacaggg
caagggcgcatccaggacttgactatagactatgtagacagacgtctttactgggcagat
atcgatcagcataacatacagtcatcagatttgcttgggggagacaaaaggctcatagtt
ccatcaaatttgcctcaccctatgggcatcacgcagtacgaagactatatctactggaca
gattttgattcaaagtccattgagcgtgctaacaaaatgacaggaaaggatcgcagtctt
attcaggaaggggttgattatgctttggacatttctgtcattcatgcctcaaggcagtca
ggtcacaattcctgtggaagcaataatggaggatgttcccacttgtgtctggctcactca
gtggatcacaaagacaacagaactcaccactgtgcttgtccaacacattatcatctcaat
tctgatgataagacatgctcaggtaaatctaataaatacagcttttggagtgctggaaat
ctgtttgtgaaagcccttgcatatgacccaggccagcaacaaatctactggattgaaggt
cgccagaagatgatcaagcgagctcctgatcatggcagcactgttgaggtgctactgaat
agtgcaaatggtcaaatgcagccatatgacattgccattgatccattttcacgtacactc
tactggacatgctcaaaccacaatgtgattaatgtcacccgtttggacatgactccagtg
ggtgtcgtgctgcaaggcccaagcaatttcaagccaagatccttggtgcttttcccagaa
cgcggctacatgttctacacaaacatggtaaaatcaccccgcatcgaatcggcacgtatg
gatggttcagagaaaactgaattatttatcaagggcctggtccaacctgtctcgctgacc
atcgataagacagagggaaagctgtactgggttgatgcaggaaagaatcgcattgagatg
tctgatctgaccgggggaaatcatcgagttttggtggatggtcatttggttgcaccgcgg
ggattagctgttcatggccagtttttgtattggttggatcgggatcaacagctgctggaa
cgctgccagaagaaaacaggtgccaaacgtctatgggtgcgaggtcgtatgcagggtctc
agtgatcttattgctgtccaacattcacttgatgttaccagccacccctgtgctgtgggc
aatggaggctgctcccacatttgtatggtggattccgacatcaaggcacgctgttcctgt
ccatacaacctcgtgctgaagaaggatggccttacctgtgcagatcccccaacttgccca
cctgatcacttcacgtgcaagagtgggggtatcacctgcatacctttggtctggcggtgt
gacaacttgtcagaatgtgaagatagctcagatgagcaagattgcccgatctgtggcccc
acccagttccactgccagagtggagagtgtgtttcaaaggacaaccagtgtgacggaact
gctaactgcaaggatggcagtgatgagagaggctgctgtgctggggtgccctgtgcatcg
tgtgaaagtcagggtcaaggagcatgtgcaccaggggagctgcgagactgcagtgagggt
gaagctaaatgtgtgcaccagccaacagtagacaaagtacaccacaacgccacacactac
gccattgctatagttgttggtgttatctttcttattgtcatcattgttgttatacttttc
tgtcgtcgcaagactcgacatgtgccatttactgatgacgacattcagatggccaagaag
ccgctcaacccacagactagtggggaaccacctcccccacaatctcacacactgtcctcc
cgtggaggcaagacttcagcttctggaggtttatccttgggtggcacatcgttggccagt
ggactgccaccattttatgatcgcagtcatgtgacaggagcttcctccagcagctccact
gggacccagtatcctcaggagactttgaatcctcccccaagcccagttacagaacgatca
gtttatactgggggaggccactactgctcttcacagagtgtgggcactgtacgatcagca
cgcaggcagcacaagccacacaggtctcgtcaccaccaccaccatcatcatagtcacatt
cccccgccccccaccacgccttgctccacagatgtttgtgatgacagtgagccttatcct
gctaaacgctttcgttactatttcaataattctcttgtggaactcagttatgactctgac
ccctatccacctcctcctacccctcgccgatacttttcggacgatgtgagttgtccaccc
tcaccttcaacagagcggagctatttcaatccttatcctcctcccccttccccagtgggc
aactctgactgctga
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integrated database retrieval system
