Pomacea canaliculata (golden apple snail): 112559078
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Entry
112559078 CDS
T05881
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112559078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112559078
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112559078
mRNA degradation factors
3'-5' decay
Pan complex
112559078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
zf_CCCH_4
zf-CCCH
zf-CCCH_4
zf-CCCH_2
zf-CCCH_9
Torus
Motif
Other DBs
NCBI-GeneID:
112559078
NCBI-ProteinID:
XP_025085759
LinkDB
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Position
LG3:complement(32536159..32553571)
Genome browser
AA seq
739 aa
AA seq
DB search
MSSAGHSGKKLTPCRYYMNSGNCAYGDDCQFLHQNPLLQNMFKNGPPPLESQGLGDMPGS
GDQYFNATMTFNPAPGSGMSEFQPYSSMQSRRGHPRHLSQNAKPFVPTHNPMDQSLANDF
AALNLAATSSMVKGSGEYPGQQQSLPHSSSTPSFAALSNMFSTPPPPTTAPVSHVVNNGS
GLAFSSGMSPSHSPGISPTSSPHVFRRNPHSSPVPPHRQTTVPQKPNAGTTFHQENVGGT
TYFYSPEDFTPQQEGALLPDFTMYNSIPSHIHHMKLKTPLQTFAMADELKMEVLNRQALA
GAHVDLAAHPDIPPQVDNYDNLVPLERSLPPSAQAKSLLGYSSTCYKAVNKTDGTLYCLR
RVHNFRLNPTLNSRLMTLVEAWNKLYHPNIVQLREAFTTKAFGDSSIVFSYDYFPGAITL
MSKHFSNPQPLNGFTSQFSMEGGSSRSFGSKGMNNRSTPTLLSESLIWCYIVQLSSALRY
IHSTGLAARTIEPSKILFYDKSRLRVNCVGVMDVLSLPSMDQATIMNFLPHWQQEDLMGL
GRIVLALACNTALALQQQNMAHALEFVQRNYSPDLKNLILYLLNNQNRPRTVNDIMPMIG
ARFFTQLDTAQLRCDVLENEMSKEVENGRLARLIFKLCSILERPEFNMDPSWSETGDRYM
LKLFRDYVFHQVDENGLPWMDMAHIVQCLNKLDSGVQEKVCLMTRDEQSIFIVSYSELKR
CFAAAFSELLNAGQPSSFA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtgccggacattccggtaaaaagctgacgccatgtcgctattacatgaactct
ggaaactgtgcatacggagacgactgtcagtttcttcatcaaaatccattgcttcaaaac
atgttcaaaaatggcccgcccccattggaaagccaagggttaggagatatgcctgggagt
ggagatcagtattttaatgccaccatgacatttaaccctgctccaggttctggcatgagt
gagttccagccctattcttccatgcagtcaaggagaggacatcctcgtcatctttcacag
aatgccaagccatttgttccaacacacaatcccatggaccaatctcttgccaatgacttt
gcagctctcaatctggcagcaacttcaagcatggtcaaaggttctggggagtacccaggt
cagcagcagtctcttccgcacagctccagtactccctcttttgcagccttgagcaacatg
ttcagcacaccccctcccccaactactgcccctgttagtcatgtggtcaacaatggttca
gggctagcattctcatctggcatgagtcccagccatagcccaggaatttcacccacctcc
tcaccacatgtgtttcgacgtaatccgcactcatcacctgtgccgccacaccgtcagacc
acagttcctcagaagccaaatgctggtaccacttttcaccaggagaatgtaggagggaca
acttacttctattctcctgaagattttacacctcagcaggaaggagctttgctaccagat
ttcactatgtacaattcgataccatcccacatacatcatatgaaactgaagactccatta
cagacctttgctatggcagatgagttgaaaatggaagttttgaatcgtcaggcacttgct
ggagcacatgttgatctggcagcccatccagacattcccccacaagttgacaactatgac
aacttagtgccccttgagagaagtctgcctccctctgcccaggctaagtctttgttgggt
tattcaagcacttgctacaaggctgtcaataaaacagatgggaccttgtactgccttcgt
cgtgttcacaattttcggttaaaccctactctaaactcaaggctcatgacactagtggaa
gcatggaacaagctttaccatccaaatattgtacagctacgagaagcatttactactaaa
gcctttggggacagctccattgtgttttcctatgactatttccctggtgctattacactg
atgtctaagcacttcagcaatccccagcctctaaatggctttactagtcagttcagcatg
gagggtgggagctcccgatcctttggcagtaaaggaatgaacaatcgcagcacaccaacc
ctgctatcggagagtcttatctggtgttacattgttcagctcagctcagctctgcgctat
attcacagcactggcctagctgctcgcactattgagccatccaagatcctcttttatgac
aagtcaaggctgcgtgtgaactgtgttggggtgatggatgttttgtcactgcccagcatg
gaccaggcaacaattatgaacttcttgccacactggcagcaagaggatctcatggggctg
ggccgcattgttttagctcttgcctgcaacacagcccttgctttgcagcagcagaatatg
gcccatgctttggaatttgtacagagaaactattctcctgatcttaaaaaccttatcttg
tacctgctgaacaatcagaataggccacgtactgtcaatgatattatgcccatgatagga
gctcgtttctttacccagctggacacagctcagctcaggtgtgatgttcttgaaaatgag
atgtccaaggaggttgagaatggtcgtcttgcacgtcttatattcaagctgtgcagcatt
ttagaaagacctgagttcaacatggatccctcatggtctgagactggtgatcgctacatg
ctgaagcttttccgagattatgtgtttcaccaggttgatgaaaacgggctgccatggatg
gatatggctcacattgtgcagtgtctaaacaaactggactctggtgtccaagaaaaggta
tgcctcatgacaagagacgagcagagtattttcatcgtttcttattcagagctgaaaaga
tgttttgcagcagctttttcagaactgctcaatgctggacagccatcaagttttgcatag
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