Pomacea canaliculata (golden apple snail): 112559098
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Entry
112559098 CDS
T05881
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1-like
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112559098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112559098
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112559098
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
112559098
NCBI-ProteinID:
XP_025085808
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Position
LG3:20718242..20738772
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AA seq
598 aa
AA seq
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MAAVEKDALKNNADTTVDDDDAWLYGDDNKGEREHAESAATQKSVIKEEAPIRTGQNGVK
RDDREEGEMSGEEGETQEKDDDDDSDDDDVQVTIGDIKAWNVNEQPRNLFKSGATYQKTV
AGTTTKPAVTTKGLDIEAQGTINGIPVYEFDLDSIKNEDKPWRKPGADITDYFNYGFTEE
TWQLYCEKQRRLIALNEGTAPVPKIVTVHTASSTGHTDKDTMPAARRVLAPVTKPAGQIN
VIGATAKDSRRPESEGDPIPVAGSGFPNRKFVVPPPGLPPTNLPPPHLPPLDYSLPPPGL
PPPPGVPPPSMTVPPPGFPPVPDPYETYFAIPPPDRSVPPPGFEDRQPFSYSNTHPSFTN
NSYTEASRPQPTHQWDAGSTYSDRSSERDWERERERRESIRRDRSPHRTEEDFNRETQWR
GHERERERRESVNVTAIALEIVTGSVSAVIGSVRETSCDDQGQERGNANLSAAQGRKKSI
DHEDLILVSIVMTRTVSPDHQSTKAGGEDERKMKKGEKLAAVKMLPKQNELIVLKCLHDC
NFLCLLRFSISFCDVHFSMHLSNMDSVWLFSVNDVERLLDVFFVLSRIVQLLNGVVML
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtggaaaaagatgcgctcaaaaataatgcagatactacagttgatgacgat
gatgcatggttgtatggagatgataacaaaggtgaaagagagcatgcagaatccgcagct
acacagaaatctgttataaaggaggaggcacctattcgtacagggcagaatggagtcaaa
cgagatgatagggaggagggagaaatgagtggagaagagggagagacacaagaaaaagat
gacgacgatgactctgatgatgatgatgtgcaggttaccataggtgatatcaaggcttgg
aatgttaatgaacagccaaggaacctttttaaaagtggtgctacttaccagaagacagtt
gcaggaaccacaacaaagccagcagtgacaactaaaggcctggacattgaagctcaaggc
accatcaatggcatcccagtctatgagtttgatttagacagcatcaaaaacgaggataag
ccatggagaaaacctggtgccgacatcacagattattttaactatggattcaccgaagag
acatggcaactgtattgtgagaaacagcgccggcttattgcattgaacgagggaacagca
ccagttccaaaaattgtgacagtgcatacagcgtcctctacagggcatacagacaaggat
accatgccagctgctcggcgagttctggcccctgtcacaaaacctgctggtcagatcaac
gttattggtgcaacagccaaggattcacgccggcctgagtctgaaggggatccaattcct
gtggcaggcagtggatttccaaacaggaagtttgttgtgccaccccctggactacctccc
acaaatttgccaccacctcacttacctcccttggactactctttgcccccacctggactg
cctcctcctccaggggtacctcctcccagcatgactgtcccgccaccaggtttcccacct
gtgccagacccatatgaaacatactttgcaatacctcctcctgacaggagtgtgccacca
cctggctttgaagacaggcagcccttcagctatagcaacacacacccatctttcaccaac
aatagctacaccgaggcctccagaccacaacctacccaccagtgggatgctggaagtaca
tacagtgaccgtagcagtgaaagggattgggagagagagcgagaacgacgtgaatccata
cgacgagacagaagcccacacagaactgaggaagatttcaatagggagacacaatggaga
ggtcatgaacgggagagagaacggagagagagcgtgaacgtgaccgcgatcgctctagag
atcgtgacagggagcgtgagcgcagtgataggaagcgtgagagagacgtcttgcgacgat
caaggtcaagagagagggaacgcgaacctgagcgcagctcaagggaggaagaaaagcatc
gatcacgaagatctgattctcgtaagcatcgtgatgactcggacagtgagtccagatcat
caaagcacaaaagcaggcggcgaagacgagagaaagatgaagaagggggagaaactggcg
gcagtgaagatgctcccaaaacagaatgagctgatagtcttgaagtgcttgcatgattgt
aactttctgtgcctgttaagattcagcatttcattctgtgatgtccacttcagtatgcat
ctctccaatatggattctgtttggttgttttctgtgaatgatgttgaaagattgttagat
gttttttttgtgttaagcaggatcgtgcagttgttaaatggtgtcgtgatgctttag
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