Pomacea canaliculata (golden apple snail): 112559178
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Entry
112559178 CDS
T05881
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112559178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112559178
03036 Chromosome and associated proteins [BR:
pcan03036
]
112559178
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112559178
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
112559178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
112559178
NCBI-ProteinID:
XP_025085972
LinkDB
All DBs
Position
LG3:complement(35285105..35313778)
Genome browser
AA seq
1676 aa
AA seq
DB search
MFGQKLGGFGTGTSTFGTSTPFGGGQSSTGFGTTAFGAQTPAGGGLFGTGTANTTGGLFG
QQSTNTFGQQQSSGGFSFGTTSSNSTTGLFGQQSTTGGLFSTPQSTSAFGTKPQGFGGFG
TTQTASTGGLFGSTQPPAASASLFSQTGTGLFGGNAAGGTTIKFNPPSGTDTMSKGGVNT
NINTHHQCITAMKEYETKSLEELRLEDYAANRKGKQQGTATGFFGQSAPGSQPTSTGFNF
GQPAVSAGFSFGTSTATSAGAGLFGTSRPLFGTTNPTTNPTTTAQSGFAFRPPSQTSVFG
QQPGGNRPLFGSTTATTQPSLFGNTPSTGFGTSTGFGSTGFGTTTTAGGGLLGSKPLTFG
TTTSTASPFGTGTNLFNKPATTSAFSFGTSTSGTGFGTSTGAFGTSGGFGNTTGSLFGNK
TSGFGLGNTGLSTGTGFTSGLGTGTTTGLFGNTQAKPAGFNFNTGSTGAFSFGGNPTGNL
LGGNASTLGTTTSTTSTPSVDLQQQLLTMASSPYGDSPLFWNLKQNSGKKEEVLKPTNPV
AQKSVLNASTYKVSPRPAAKIKPKSLHGLLSGNKSQLFDGLDEEEDLGFGGETFVPRHNI
KKLVLKKNLESSASTSRSLSQANDPSSPQLTDHNLSLVSRQMERRQQGQGDDVRHRLLTS
NGVLASGGGETPPRNLGSMDDTITALNMRREIPASHRQGDFCEEQEEEQGNISNPNLTNS
NLADESLDPLPVERPPHPAGIVLTRPGYYTDPSMDELATMVDENGDCLVEDLTIGREGYG
SVFFPGTINVAGMNLDEIVHFRRKEIVVYPNDDNKPPLGEGLNCKAEVTLDCVWPSDKTT
RSPIKSPERLNSMNYQEKLEEMTTRMGGKFIDYRPETGSWVFEVPHFTKYGLVEEDEEEP
PSEQDRKRLKILQQQHVAVQKQKILLQQHLKAKGIAVTDLDDDAEVGAEVLRDVMMGEPA
LMSDITQEPFPSDMFTDTLEEGSGQQVPSALRFGVSAQNMQLMKASFFDDDNNADGDSEG
HYGEKSTWYKAEGHLLKSGEKAVPSLFSSSLSLKQSLTPRSLSPDLKDLQKDRKSLFQAT
FGYTSFGRSPPASFHPPLLEHKLLASGMTARDVPHKIVGLRIEHEVPHVQESLMYDKQKL
SMDSACFMGRSFRVGWGPGWTLIHSGLPCITQEEELETGTKAAYTLLPTTGTGKGYSRRK
AWTICVEKLGVADYFHPSDDIVKESHEELLQTALAHSRIDQENGVPVFMPFPTIDALHQY
ATHNAAKALQQKHPDAEMQSQMQQVWELCVSLWGSPPELKDDIEHGGYAECLARREAFSR
WLSSVTDSKIKAEVAESSYMQPDGHLQAIIAHLSGRQISEACQVAQNAGDDRLALLLAQA
AGSSVVRQMVMVQLAKWAEMKVTDFIREQRQRVYCILAGVLFWDGPSPINTCYGLDWKRA
LALHLWYVCQPNAPISEAMKKYDGAFKRSGERSAYAAPPLPAYLEDSGSLLVSKTSEFMM
EDDEEEEVYDTCYHLLKLFCEKGYPLKLILNPTTITANSLDHRLSWHLLGVLTALGFRHL
SPCQEASLHVSYAAQLESLGLWHWSLFPLLHIQDTQQREHAIQEILCRHVQLSSKSEYLE
EENFILQELQIPPQWIHRAKAIKARYLKQHSDEAHHLLQAGRWNEAHKGHRHSFSS
NT seq
5031 nt
NT seq
+upstream
nt +downstream
nt
atgtttggccaaaaacttggtggcttcgggacagggacatctacatttggaacatccaca
ccatttggaggtggacaatcttcaacagggtttggcaccacagcatttggagcacaaaca
cctgcaggcggtggtctttttggaactggtacagccaacacaacaggaggactgtttggt
cagcaatctaccaacacatttggtcaacagcagtcatcaggaggatttagttttggaact
accagcagtaacagcactacaggtctgtttggtcagcagagcacgacagggggattattt
tccacaccacagagtacttctgcctttggtaccaagccacagggctttggaggctttgga
actacacagacagcaagcacaggaggcctgtttggaagtacacagccaccagctgccagc
gcatcactgtttagccagactggcacaggattgtttgggggaaatgcagcaggaggcact
accattaagttcaatcctccctctggcaccgacaccatgtctaagggtggtgtcaacaca
aacattaacacccatcatcagtgcatcactgcaatgaaggagtatgaaaccaaaagtctg
gaggagttgcgcttagaggactatgcagcaaatcgtaaaggaaagcagcaagggacagcc
actggtttctttggtcagagtgctccaggatctcagccgacatcaactggattcaatttt
ggtcagcctgcagtgtctgctggctttagttttgggaccagtactgccactagtgcagga
gcgggactgtttggtacaagcaggcctttatttgggaccactaaccccactaccaacccc
actacgaccgctcagtcaggatttgcctttcgtcctccttcacagacatctgtctttgga
cagcagcctggaggcaacaggcccctgtttggttcaactacagccacaactcagccctca
ctatttggcaacacaccctccacaggattcggtaccagtacagggtttgggtctactggc
tttggcaccacaaccacggcaggtggtggactccttgggagcaaacctcttacttttggc
acaacaacttcaacagcgtcaccatttggcacaggcaccaatctgttcaacaagcctgct
acaacctcggcgttttcttttggtaccagcaccagcggcactggctttggcaccagcaca
ggggcctttggaaccagtggaggctttggcaacacaacaggcagtctttttggaaacaag
accagtggctttggactagggaacacaggtcttagtactgggactggctttacaagtggt
cttggaacagggacaactactggcttgtttggcaacacccaggccaaaccagctggcttc
aactttaatactggttccactggtgcattttcttttggaggaaacccaacaggaaatctt
cttgggggcaatgcatcaactcttggaacgaccactagcacaacaagcactcctagcgta
gatttgcagcagcagttgctcaccatggccagctctccttacggtgattcaccacttttt
tggaatctgaagcagaattctggaaagaaggaagaagttctgaaaccaacaaatccagtt
gcccaaaagtctgtgcttaatgccagtacttacaaggtcagcccacgtccagcagcaaag
ataaaaccaaaatctctccatggcctgctaagtggcaacaagagccaactttttgatggt
ctggatgaggaggaagatcttgggtttggtggagagacatttgtgccacggcacaacatc
aagaaactcgtgttaaagaagaatttggaaagtagtgcttccaccagccggtctttgtct
caggcaaacgacccatccagtccacagttaactgaccacaacctgtcacttgtctcaaga
caaatggagcgtcgacagcaaggtcagggagatgatgtccgacataggcttctcacttct
aatggtgttctggcttcaggtggaggtgaaacaccaccacggaatctaggctccatggat
gataccatcactgcgctcaacatgaggagagagatccctgcttcacacaggcagggagac
ttctgtgaggagcaggaagaagagcaaggaaacatctcaaatcccaatcttacaaacagt
aatctggcagatgagtcactagatccacttccagtggagagaccacctcatcctgctggc
attgtcttgaccaggcctggctattacacagacccctccatggacgagctggctaccatg
gttgatgagaatggagattgcctggtggaagatctgaccattggccgagagggctatggc
tcagtcttctttcctgggaccatcaatgtggctgggatgaatttggatgaaattgtgcat
ttccgccgtaaggagatagtggtgtatcctaatgacgacaataaacctccgctgggtgaa
ggcctgaactgcaaagcagaagttaccctggactgcgtgtggccctctgacaagacaact
cgctctcccatcaaaagtcctgagcgtttgaacagcatgaactaccaagaaaagctggaa
gaaatgacaaccaggatgggtggcaagtttattgactaccggcctgaaactggttcctgg
gtttttgaggtccctcattttaccaagtacggtttggtggaggaagatgaagaagagcca
cctagtgagcaggacaggaagcgactaaagattcttcagcagcagcatgtggctgtgcag
aagcaaaagatcctactccagcagcatttgaaggccaaaggtatagcggtcactgacttg
gatgatgatgcagaggtgggagctgaagtgttgagggatgtcatgatgggggaaccagcc
ttgatgtcagacatcacgcaggagccttttccgtccgacatgtttactgacactctggag
gagggaagtgggcagcaggtgccctcagcactgaggtttggtgtgtctgctcagaacatg
cagctgatgaaagcctctttctttgatgacgacaacaatgctgatggagatagtgaaggg
cactatggggagaagagcacatggtataaagctgagggtcatttgctgaagagcggagag
aaagcagtcccctcattattcagttcatcgctcagcctgaaacagtcgctcactcctcgc
tccttatctcctgatctgaaagatctgcagaaggatagaaagagcctgtttcaagcaacg
tttgggtatacctcctttggccgctctccacctgcatctttccatccgccactgttggaa
cacaagcttcttgccagtggtatgactgccagagatgtcccacataaaattgttggcctc
cgaattgagcacgaggtccctcatgtgcaggagtcattgatgtacgacaaacaaaagttg
tctatggactcggcttgcttcatgggtcgaagtttccgtgtgggatggggcccagggtgg
actttgatacattcaggtttgccctgcataacacaggaagaagaacttgagactgggaca
aaagcagcatacactctgctacccaccacaggcacaggaaagggatatagcagaagaaaa
gcatggaccatctgtgtggagaaacttggtgtggcagactattttcatccatcagacgac
attgtcaaggaaagccatgaagagctgctgcagacagcactggcacattccaggatagac
caggagaatggagtcccggtcttcatgccttttcccaccatagacgcgttgcaccagtat
gccacacacaatgctgccaaagcgcttcaacagaaacatcctgatgccgagatgcagagc
cagatgcagcaggtgtgggaactatgtgtatctttgtggggaagtcctcctgagttgaaa
gatgacattgagcatggaggttatgcagagtgtttagcaagacgggaagccttctcaaga
tggctttcctcagttacagattccaaaattaaggcagaagtagcagaatcatcttacatg
caaccagatggtcaccttcaagctatcattgcacacttgagtggtcgtcagattagtgag
gcatgtcaggttgctcaaaatgctggcgacgatcgactggctttgctcctggcacaggcg
gctggcagctcagtggtgcggcagatggtgatggtgcagctggccaagtgggcagagatg
aaggtgacagattttattcgagagcaacgacagcgtgtgtactgtattctagcaggtgtt
ttgttttgggatgggccttctcctatcaacacctgttatggactggactggaaaagagct
ctggcattgcatctgtggtatgtctgccagccgaatgcacctatttcagaagccatgaaa
aagtatgacggtgcctttaaaaggtcaggtgagaggagtgcctatgcagcacctcctttg
cctgcctaccttgaagactcgggcagtctattagtcagcaaaacttcagaattcatgatg
gaagatgatgaagaggaggaagtgtatgacacttgttaccaccttttgaaacttttctgt
gaaaagggttacccccttaaactcatcttgaatcccaccaccatcacagccaacagcctg
gatcatcgactgagctggcacctcttgggtgttctcacagctctgggctttagacatctg
tccccatgccaagaggcatcactgcacgtcagctatgctgcacagctggagtcacttggt
ctctggcactggagtctgtttcccttacttcacatccaggatacacagcagcgagagcat
gccattcaggaaattctgtgccgacatgtacagctctcctccaaatctgaatacctagag
gaagaaaattttatactgcaggagctgcaaatccctccccagtggattcacagagccaag
gcaataaaagcgagatacttgaagcagcacagtgatgaagctcatcacttgttgcaagca
ggccgctggaacgaagcgcataaaggtcatcgtcactcatttagcagctaa
DBGET
integrated database retrieval system
