Pomacea canaliculata (golden apple snail): 112559279
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Entry
112559279 CDS
T05881
Name
(RefSeq) high mobility group-T protein-like
KO
K10802
high mobility group protein B1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03410
Base excision repair
pcan04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112559279
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112559279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcan03036
]
112559279
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112559279
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcan04147
]
112559279
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
112559279
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
112559279
MMR (mismatch excision repair)
Other MMR factors
112559279
Exosome [BR:
pcan04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
112559279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
Ccdc124
YABBY
Ribosomal_60s
NOA36
BCS1_N
ANAPC15
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
112559279
NCBI-ProteinID:
XP_025086175
LinkDB
All DBs
Position
LG3:36241108..36250688
Genome browser
AA seq
210 aa
AA seq
DB search
MGKKDEGKPRGRMSSYAFFVQTCREEHKKKHPGESVVFAEFTKKCADKWKEMTPKEKRHF
EEMAERDKARYDREMANYVPPKGVKSVKRKRTKDPNAPKRALSAFFFYCAEERPKLRASN
PGMNVAEVAKELGKRWETLPERARFEEMATKDKERYEKDMAAYRNGTFSGAKKAKPAATS
NKAPPKKDDDDDDDEEDDDDDDDDDEGDDD
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaagatgaaggaaagcccaggggtcgtatgtcatcatatgctttttttgtg
caaacatgtcgagaagagcacaaaaagaaacatcctggagaatctgtggtctttgctgaa
tttaccaagaaatgtgcagataaatggaaagaaatgactcctaaagaaaagcggcatttt
gaagaaatggctgagagggacaaagcacgctatgatcgcgaaatggccaattacgtccca
ccaaaaggtgtgaagagtgtaaaacgcaagaggaccaaggatccaaatgctcccaaaaga
gcattgtcagcattcttcttctattgtgcagaggaaaggcccaaactacgggcatctaat
cctggcatgaatgtggctgaagttgccaaggaactaggcaaacgctgggagacacttcca
gagcgtgctagatttgaggagatggccactaaagataaggagagatatgagaaggacatg
gcagcatacagaaatggaacgttttcaggggctaaaaaggccaaaccagcagcaacatcc
aacaaagcccctccaaaaaaagatgacgacgatgatgatgatgaggaggatgatgatgat
gacgatgatgatgatgagggtgatgatgattaa
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integrated database retrieval system
