Pomacea canaliculata (golden apple snail): 112559367
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Entry
112559367 CDS
T05881
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-like
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
112559367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112559367
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112559367
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112559367
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
112559367
U7-dependent histone pre-mRNA processing factors
112559367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
112559367
NCBI-ProteinID:
XP_025086332
LinkDB
All DBs
Position
LG3:complement(34279397..34283252)
Genome browser
AA seq
697 aa
AA seq
DB search
MRFADTSDRMTSKRKPEVQVPAEESDELLIRPLGAGQEVGRSCHLIEFKGKKILLDCGIH
PGMHGVASLPFLDMIDPEEIDLLLVSHFHLDHSGGLPYFMEKTKFRGRCFMTHATKAIYR
WLLSDYVKVSNISTDDMLYTDADIEKSMSKIETINFHQEMEVNGVRFWCYTAGHVLGAAM
FMMEIAGVKILYTGDYSRQEDRHLMAAELPNVHPDIVIIESTYGTHIHENREEREHRFTS
LVHDIVNRGGRCLIPVFALGRAQELLLILDEYWSQHPELHDIPIYYASQLAKKCMTVYQT
YINAMNEKIRRQISISNPFVFKHIINLKNMEQFEDIGPSVVLASPGMMQSGLSRELFEAW
CTDKRNGCIIAGYCVEGTLAKHILSEPSEIQTMSGQKLPLKCSVDYISFSAHADYKQTSE
FLRALKPAHVVLVHGEANEMARLKAALIREYEDDPDYQMEVHNPRNTTAVHLHFRGEKMA
KVVGELAAKPPVQGHKISGILVKRNFNFHLMAPDDLHSYTDLAMSTVTQRLSVGYTGTVQ
LLKFYLGQLAGDIWQTTNAGITTLRVFNAITVTLQPHMAIVEWVANPVTDMYADAVVTVI
LRAERDPVPPKNVPDIMAIDKAHFQECLLETLEEMFGTGCTDKLFQRDRLTVIVDDKQAI
INLDTLEVVCCDDALQQVLQSVITRLHQAITPLRANQ
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttgctgacaccagtgacagaatgacaagcaaacgcaaaccagaagtgcaggtt
cctgcagaagagagtgatgagctcctcattaggccactgggagctgggcaggaggtgggt
cggtcatgtcatttaattgagttcaagggcaaaaagatacttctggactgtgggatacat
ccaggaatgcatggtgtggcttctttgccattcctagatatgattgatccagaagaaata
gatctccttctggtgagccattttcacctggaccacagtggaggcctgccatactttatg
gagaaaacaaagttcagagggaggtgctttatgacacatgcaacaaaagctatctatcgc
tggctgttatcagattatgtgaaagtcagcaacatctctacagatgacatgttgtacaca
gatgccgacattgagaaaagcatgagcaaaatagaaaccatcaattttcatcaggaaatg
gaagtgaatggtgtacgcttttggtgctacacagcaggtcatgtgttgggagcagccatg
ttcatgatggagattgctggagtgaagattttatacaccggtgactactctcgtcaagaa
gataggcatctcatggcagcagaactgccaaatgttcatcctgacattgtgattattgag
tccacatatggaacacacattcatgaaaatcgcgaggaacgagagcaccgctttacaagc
cttgttcatgatattgtcaaccggggtggaaggtgccttattccagtctttgctcttggc
agagctcaggagttgctgctaattttagatgaatactggagccaacatcctgaactgcat
gacattccaatatattatgcatcacagcttgcaaaaaagtgtatgactgtgtaccagaca
tacatcaatgctatgaatgaaaaaattcgtcgtcagatctccatcagcaatccctttgtt
ttcaaacatataatcaaccttaagaacatggagcagtttgaagacattggtccatctgta
gtgctggctagtccaggaatgatgcagtcaggtttgtcacgtgaactctttgaagcatgg
tgcacagacaagcgcaatggctgcatcattgcaggttactgtgtggagggaacattagca
aaacacatcctgtcagagccaagtgagatacagacaatgagtggtcaaaagttgccatta
aaatgctctgtggactatatttcattctcagcacatgctgattataaacaaaccagcgaa
tttctaagagccctgaaacctgcacatgtggtccttgtgcatggtgaagccaatgaaatg
gcacggctaaaggctgctctcattagggaatatgaagatgatcctgattatcaaatggag
gtccacaatccacgcaacaccacagctgttcaccttcactttcgaggtgaaaagatggca
aaagttgttggagagcttgctgccaaacctccagtgcaaggtcacaaaatttctggcatc
cttgtgaagcggaattttaacttccacctcatggctcccgacgacttgcatagctatact
gatttggccatgagcactgtaacacagcgtcttagtgttgggtacaccggcaccgtgcag
ctcctcaaattctatcttggccagctagcaggggacatctggcagactacaaatgcaggt
atcaccacactgcgagtcttcaacgccatcactgtgactcttcagccccacatggccatt
gtagagtgggtggccaatccagtgacagacatgtatgctgatgctgtggtaacagtcata
cttcgggcagagcgagacccagtgccaccgaagaatgttccagatataatggccattgat
aaagcacacttccaggagtgcctgctagagactttggaagaaatgttcggcacagggtgc
acagacaagctgtttcagcgggatcgcttgacggttattgtggatgacaagcaagctatt
attaacttggacactttggaggttgtttgctgtgatgatgctttgcagcaagtactgcag
tctgtcatcactagactccatcaagcaatcactccattgagagcaaatcagtga
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