Pomacea canaliculata (golden apple snail): 112559561
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Entry
112559561 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-11 X-linked-like
KO
K16498
protocadherin delta 1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
112559561
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcan01009
]
112559561
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcan04515
]
112559561
Protein phosphatases and associated proteins [BR:
pcan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112559561
Cell adhesion molecules [BR:
pcan04515
]
Cadherins
Protocadherins
112559561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
112559561
NCBI-ProteinID:
XP_025086678
LinkDB
All DBs
Position
LG3:complement(21703221..21727279)
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AA seq
1395 aa
AA seq
DB search
MSGIRRAALRYAILVLVLLLASSLASDVFYSIREELSPGTIFGYIADDSDLRRKVSXDEL
NNLRYSFLTQGNPNSRYFNIESKTGVLSVGSRIDRETVCSFRPDCQLTVSAVVQSELGPF
FHIINVHVEIVDVNDNPPTFLQDVFTVSIPENAALGVTYPLPTAFDKDTGTNNTVGDFGL
AGPLVRDYFLITGHETFSLQSSRDEVGNVQTALQLHSELDREQAAAYTILVGARDGGRPP
LTGTLTVHVTVTDVNDNYPVFESYVYYVNVSETTRTDVPLVQSWHAKLLKVCSDECDVSW
SHVSLLMVLEGLFCFSDQSWDADIGHNGNLTYSFSQLQPQDVLNLFRMETVTGTMYLARS
VENHTGKILNLWWKPRIRGHPQNLTSSRASARAGHHQQPPRDLRGHTVLHWRGAGRDLTC
PELILLLTYLSSVDSTTAVSEYAEVGKVVAYVSVRDPDSGENGVTVCRLNTQDFELQPLN
NQGQYKVILVTNLDREKTAQYDIAVGCTDFGFPPLENTAKFLVIVKDENDNAPVFSRRSY
VTTIKENRTVGAVVAQLTVTDYDEGRNADVTFRVAGAYGDDFEILDNGTMIATVALDREV
SEKLVVKVLAVDKGFPPLSGSATVFITLEDVNDQAPSFSDRRYSFSVAEDARPGTYVGIV
SADDGDVGRNAEVTFLPAPDQYSDTPATFVITRDGVVKTNVEMDREKVDVHFFAVVARDE
GDPPLSSTATVTIHVDDVNDNVPVFLFPTEANDTLSIPHTFAPGTPITRVLAEDSDSGPN
AALVYSCASANDSGLFGINSGTGDLYLHRYLSRSQTGLYVLRVAAHDEGTPQLSNQTLLF
VDIYFDNSTLLESAQAVAPSKAVITALILVGVIVVVAGVAVTTLVCIRRSEARKKKNVSV
DQQAAPGKLQGGYYIAPGVCESPAFGGVVTSSGRVGKPVPEQAGGSDNTVSGKDTSNLRT
ANPYVIMPPHSNYSDPEGPPEIIEISRNGLFHRTEEPYPEDFDGRADDSHFLPSGHKRVH
SARVSGKTLYADKKSSEAVDEAKRADDTLSLSELSYQGSTSDSGRGGSEFDINNGASKEK
GAAPVSSSPMPFKGNNSLGRPRDPDVSFTTFRGESPCSFRFDSDSDTLTRNPRHGNPRSS
PLPLSPSLHLQPHARSLNCVAGTGSPGVHRSIPFGADSTSSDEANSTGRKSSLARRAVTP
SGDILYDRGERNYSLPTERPYGGGLGGGARFPNGYGGSRSGAHGPPAFDPAFSLASAAAL
GAHPVHNHHAGPHVEFRGRNTYGNAAVPRRGVSDYVNTFADNDSDDETHVTAGKEPTEVE
YLLPPYPEVAEEEEGEDHATERSALNLPEWQEPSSPQGRFLQIQLAVGGLVNVVVTLDTR
LTEKDCSESSLPTRY
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaatcaggcgagcggccttgcgctacgccatcttggtcctcgtgctcctcctg
gcctcctccctggcgagcgacgtcttctactccatcagagaggagttatctcccggcacc
atcttcggctacatcgccgacgactcggacctccggcggaaggtgagcnccgacgagctg
aacaacctgcggtacagcttcctgacccaaggcaaccccaacagcaggtacttcaacatc
gagtccaagaccggagtcctgtcggtcggcagtcgcattgaccgcgagactgtctgcagc
ttccgaccggactgtcagctgacggtgagtgcggtggtgcagtcggagcttggtcccttc
ttccacatcatcaacgtccacgtggagatcgtggacgtcaacgacaacccgcccaccttc
ctgcaggacgtcttcacggtgtccatccccgagaacgcggcgctgggggtcacctacccc
ttgcccactgccttcgacaaagacacaggcaccaacaacacggtgggcgactttggtttg
gctggtcctctcgtgcgagactattttctcatcacggggcacgagaccttctccctgcag
tcgtcacgtgacgaggtgggcaacgtgcagacagcactacagctgcacagcgagctggac
cgcgagcaggccgcagcctacacgatcttggtgggggcaagagacggggggcgcccccca
ctgactggcaccctgactgtgcacgtgaccgtcaccgacgtcaacgacaactatcccgtg
ttcgagagctacgtgtactacgtcaacgtctccgagacgacccggacagacgtccctctt
gtgcagtcgtggcacgcaaaactgctaaaggtgtgtagcgatgagtgtgatgtgtcatgg
tcacatgtgtcattgctgatggttttagaaggattattttgtttctcagatcagagctgg
gatgccgacatcggacacaacggcaacctcacctacagcttctcgcagctgcaaccgcag
gacgtcctcaacctcttccgcatggagacggtgacaggcaccatgtacctcgcgcgcagt
gtagagaaccacactggaaaaattttgaacttgtggtggaagccaaggatcaggggtcac
ccccaaaatctcacgagctctcgtgcgagtgcgcgtgctggacaccatcaacagccgccc
agagatctacgtggacatactgtcctccactggcgaggggcgggcagagaccttacctgt
cctgaactcattttattgctgacttacctgtcctctgttgactccaccacagcagtgtcg
gagtacgcggaggtaggaaaggtggttgcttacgtgtccgtccgcgacccggactcaggt
gagaatggtgtgacagtgtgtcgcctcaacacacaggacttcgagctgcagcccttgaac
aaccagggacagtacaaggtcatcttggtgacgaacttagaccgagagaagacagcgcag
tacgacatcgccgtgggctgcacggacttcggcttcccgccgctggagaacacggccaag
ttcctcgtcatcgtcaaggacgagaacgacaacgcacccgtcttctcgcgccgcagctac
gtcaccaccatcaaagagaaccgcacggtgggcgccgtggtggcgcagctgacggtgacg
gactacgacgagggccgcaacgccgatgtgacgtttcgcgtggccggcgcctacggcgac
gactttgagattctcgacaacggcaccatgatcgccaccgtggctctggatcgggaggtg
tccgagaagctggtggtgaaggttctggcggtggacaaaggtttccctcccttgtcgggg
tcggccacagtgttcatcaccctggaggacgtcaacgaccaggcgccgtccttcagcgac
cgccgctactccttcagcgtggcggaggatgctcgccccggcacctacgtgggcatcgtc
agcgccgacgacggcgacgtggggcgaaacgctgaggtgacgttcctgccggcgcccgac
cagtacagcgacaccccggcgaccttcgtcatcaccagggacggcgtggtgaaaaccaat
gtggagatggacagagaaaaggttgatgttcatttcttcgcggtcgtggctcgggacgag
ggggacccgcccctctcctctaccgccaccgtcaccattcatgtcgatgacgtcaacgac
aacgtgcccgtctttctcttccccacagaggccaacgacaccctgtccataccccacacc
ttcgccccgggtaccccgatcacccgcgtcctggccgaggactcggactcggggccgaac
gcagcgctcgtgtactcgtgtgcctccgccaacgactcgggcctcttcggaatcaactcg
ggtacaggcgacctgtacctacaccgctacctgtctcgcagtcagacgggcttgtacgtg
ctgcgggtggcggctcacgacgaaggcaccccccagctgtccaaccagacactcctcttc
gtagacatctactttgacaacagtacgctgctggagtcggcgcaggcggtggcgccgtcc
aaggcggtgatcacggcgctcatcctggtgggggtcatcgtggtagtggcgggggtggcc
gtcaccaccctcgtctgcatccgccgctccgaagccaggaagaagaagaacgtcagcgtc
gaccaacaggcggcgccaggaaagctgcaaggagggtactacatcgccccgggggtgtgc
gagtctcctgcctttggaggcgtggtgaccagcagcggcagggtgggtaagccggtaccc
gaacaggcgggcggcagcgacaacaccgtcagcggcaaggacaccagcaacttgcggaca
gccaacccctacgtcatcatgccgcctcacagcaactacagcgaccctgagggtccgccg
gagataatcgagatctctcggaacggactgttccaccgcacggaggagccctacccggag
gactttgacgggagggcagacgacagccattttctaccttccggtcacaagagggtgcac
tcagccagggtttccggcaaaactctctacgcagacaaaaaatcgtcagaagccgtcgat
gaagcaaagagagcagacgacacactgagtctgagcgagttatcctaccagggcagcacc
agcgacagcggccgaggcggctccgagttcgacatcaacaacggagccagcaaagagaag
ggtgcggcacctgtcagctcttcgccaatgcctttcaaggggaacaactctctcggacga
cctcgtgacccggatgtgtccttcacgaccttcagaggagagtcgccgtgtagtttccgc
ttcgactcggacagcgacaccctgacccgcaatcctcgccatggcaacccacgctccagc
cccctgccgctgtcccccagcctccacctgcagccgcacgcgcgcagcctgaactgtgtg
gcgggtacggggtcaccgggtgtgcaccggagcatccccttcggtgccgactccaccagc
tccgacgaggccaacagcactggccgcaagagcagcctggccagacgtgcagtgacacct
agcggcgacattctgtacgacagaggagagaggaactattcgctgccgaccgagagaccc
tacggcggcggtctcgggggaggcgcgcgcttccccaacgggtacggggggtcacgctcg
ggtgcccacggcccacctgccttcgaccccgcgttcagtctcgccagtgccgcggcgctg
ggtgcccacccggtgcacaatcatcacgcgggcccgcacgtggagtttcgcgggcggaac
acttacggcaacgcggccgttccgcggcgaggcgtgtcggactacgtcaacacgttcgcc
gacaacgacagcgacgatgagacgcacgtgacggcgggcaaggagcccacggaggtggag
tacttgttgccgccgtacccggaagtggctgaggaggaggaaggagaggaccacgcgact
gagagaagtgccttaaacttacccgagtggcaagaaccaagctcaccgcaaggacggttc
ctacagatccaactggcagtcggaggtctagtcaatgtagttgtcacactggatacacgt
ttaacagaaaaagactgttctgagtcttcactgcctacccgatattga
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