Pomacea canaliculata (golden apple snail): 112559594
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Entry
112559594 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-2-like
KO
K16498
protocadherin delta 1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
112559594
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcan01009
]
112559594
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcan04515
]
112559594
Protein phosphatases and associated proteins [BR:
pcan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112559594
Cell adhesion molecules [BR:
pcan04515
]
Cadherins
Protocadherins
112559594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
CEL_III_C
Protocadherin
Motif
Other DBs
NCBI-GeneID:
112559594
NCBI-ProteinID:
XP_025086711
LinkDB
All DBs
Position
LG3:27399916..27421474
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AA seq
1060 aa
AA seq
DB search
MIDREQMCNLLTTCQVEFDVTIKSTISTNFIKLVSVKVFIDDINDNAPTFPTNEVNITFP
ENAPLETKIPVSGAFDRDTGLATPIRYSLQDTGVFVLSEERQLDGLSSLKLTLKQPLDRE
NISFYSLLLLASDGDDPGSHTGTLVVNVEVGDINDNSPTFTQNGFNLTVNDTADAGTTFG
QLKAYDADAGVNAQLSFRFSILTESVVQDLFQLNEISGELSVKADLQYQSRRNFQCVVEV
WDRGVPPLYSQTILRIQVVNNGNTPPEAGTDPSDPAYDTRSTRMNENAAVGTFVGSLKVE
DLDEGSDGMIECWSTNPHVSLEAFDEKSYGVVVANELDYEDSPQVNISITCSDHGIPRLT
TSTTFIIYVLDVNDNAPQFTQSVYNGSVKESIEGGQKVVQVLALDKDGFNNNQVMYSLGE
ADERLFTMDATTGWVRLNVSVDREHTPMLTVVVFATDSGSPPLTGTATVTVSVEDINDNV
PYLNKTDYYISEAVPVGYVFNARSCFVADEDIDVTSPFIILTNGSIEVNKKLNRETQNET
RLVVFLRDKGTPALTGSGTLTLHIVAYNDEPPQFLFPSPLNKTAWIGAEAPLGSHVCRVQ
TADGGLGAPQNVLYNIAEGNADNWFGINSRSGELFVARSLLPLAGSTVQLKISSANTLNP
QMLSYGDLEVTVGPSNASLLTRAALGAQDSYVIVAGIISGVTVIIAVVIISVIVHLRTTD
LRRMQAAKSKATRPNNVNSRVPIAVSFVPEVKGEKLQKTNTTLTSSMGGKNAAFTASEKG
GSAVLKPTLCSKPQLWSQTLGIEDHNSDTSGETTCDSGRGASDEEIVAPLHEAYAGYRPQ
ARVDARYSNAPPRIPPREPLQWTQVGWRVSPPADAHRRVPDDIRHGDILSRANQFRYSPD
DRTSPPPPFYASSVPSRRMLASQEPDESLGRQFELTSGRKYPKSSRQTGPGRSNAPTASP
SPPLQREVVSRTTEGELPVNRSSSTCLPSGSKVQGTPSKGGEESGHQGRLAWHADGPPPR
ARPSSSLTSLAPSGDDDDNTTTSGSYSIDFDDIMNVSLEC
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgattgaccgcgagcagatgtgcaatcttttgaccacttgccaggtggagtttgatgta
acaattaagtctacaatttctactaacttcatcaaacttgtatcagtcaaagtctttatt
gacgacatcaacgacaatgctcctacctttccaacaaacgaagtaaacatcaccttccca
gagaatgcgcctctagagacgaagattcctgtatcaggtgcattcgatcgggacacggga
ctagccacacccatcaggtactccctacaggatactggcgtgtttgttctgtcggaggag
aggcagctggacggattgtcttccctgaagctcaccctcaaacaaccccttgaccgcgag
aacatctccttctattcgctccttctcctggcaagcgatggtgatgatccgggcagccat
actggaacccttgtggtcaacgttgaggtcggggatatcaacgacaactccccgacgttc
actcaaaacggcttcaacctgacggtcaatgatacggcagacgcgggcaccaccttcggg
caactgaaagcctacgacgctgacgccggcgtcaacgcacagctgagctttcgcttcagc
attctgacagagtcggtcgtgcaagacctgttccagctgaatgagatttccggagagctg
agtgtgaaggccgacctccagtaccagtctcgtcgcaacttccagtgcgttgtggaagtt
tgggaccgcggggttccgcctctctactcgcagaccatcctcaggattcaggtcgtgaac
aacggcaacaccccgcccgaagctggaactgacccttctgatcccgcttacgacacaaga
agtacccggatgaatgagaacgctgctgtgggtaccttcgttggcagccttaaggtggag
gaccttgacgaaggcagcgatggtatgatcgagtgctggagcacgaaccctcacgtatcg
ctggaggcttttgatgagaagagctacggcgtcgtcgtggccaatgagttggactacgag
gatagccctcaggtaaacatttccatcacttgcagcgaccacgggatcccacgtctgaca
acatcgactaccttcataatctacgtgctagatgtcaacgacaatgccccgcagttcacg
caatctgtctacaacgggtcagtgaaagaaagcattgaaggaggtcagaaggtcgtacag
gtcctggcgctagacaaggacggctttaacaacaaccaggtaatgtactcgcttggcgag
gcagacgaacgtctcttcactatggatgctaccaccggctgggttaggctgaacgtgtct
gtggaccgggaacacactcccatgctgacagttgtggtctttgcgacagattcggggagc
cctccgttgactgggacggccacagtgacggtgtcagttgaagacatcaacgacaacgtt
ccttacctcaataagaccgattattacatcagcgaagcggtgccggttggttatgtcttt
aacgcccgaagttgtttcgtcgccgacgaagatattgacgtaacctctccgttcatcatc
cttacgaacgggtctattgaagtcaacaagaaactgaaccgagagacacagaacgagacg
agactagttgtgtttctgcgagacaaagggacgcccgctctcactggttcgggaaccttg
actttgcacattgtcgcttacaatgacgagcccccgcagttcttgtttccttcccccctg
aataagacagcctggatcggtgccgaggctcctcttggatcccacgtttgccgagtgcaa
accgcggatggcgggctaggcgcgccccagaacgtcctgtacaacatcgctgaaggcaat
gcggacaattggtttggcatcaacagtcgatccggggagctgttcgtcgctcgtagcctt
cttcctctcgccggttcgaccgtccagctgaagatttcctcggcaaacacgctaaaccct
cagatgctgagttatggcgacttggaggtaacagtggggccgtccaacgccagcctgctg
acgcgggccgccttgggcgcgcaagacagctacgtcatcgtcgccggtatcatctctggc
gtcacggtcatcattgctgtggttatcatctcagtcatcgtccacctgagaacgacagac
ctgaggaggatgcaagctgccaagagcaaagccactagaccgaacaatgtcaactctcgc
gttccaatcgcagtctcctttgtgccggaggtaaagggagagaagcttcagaagaccaac
accacactgacatcatctatgggcgggaagaatgctgcattcacagcctctgaaaagggg
ggttctgcggtgctaaagcccacgctctgcagcaaaccacagctctggtcgcaaacactt
ggtatcgaagatcacaacagcgacacatcaggggaaacaacttgcgacagcgggcgcgga
gcgagtgacgaagagattgtcgcccctttacatgaggcttacgcaggttaccgaccgcag
gcacgcgtcgatgcaaggtactccaatgcgccaccacggatcccacctcgcgagcctctc
cagtggacacaagttgggtggagagtgtcgccacctgctgacgcacatcggcgtgtccct
gacgacatccgtcatggtgacatcttgtccagagctaaccagttccgatattctccagac
gacagaacctccccaccgcctcctttttatgcttccagcgtacctagtcgtcggatgtta
gcttctcaggaaccggatgaaagtctaggcagacagtttgagcttaccagtgggcgcaag
tacccgaaaagttcgcgccagacaggaccgggtaggagcaacgcccctactgcatcaccc
agtccgccactccagcgagaagttgtgtcgcggacaactgagggtgagctgccggtcaac
agaagcagttcgacctgcttgccctcaggtagcaaggtccaggggacacctagcaagggt
ggggaggaaagcggccatcaagggaggctggcttggcacgcggacggtccgccacccaga
gcgcgcccgtcctcgtcgctgacaagcctagctccgagtggtgacgacgacgacaacacc
accacctccggcagctactccatcgactttgatgacatcatgaatgtctcgctggaatgc
tga
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