Pomacea canaliculata (golden apple snail): 112560198
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Entry
112560198 CDS
T05881
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112560198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112560198
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112560198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Fungal_KA1
Motif
Other DBs
NCBI-GeneID:
112560198
NCBI-ProteinID:
XP_025087630
LinkDB
All DBs
Position
LG3:complement(20215635..20223750)
Genome browser
AA seq
274 aa
AA seq
DB search
MADAFRCALPKEYYRQFIERDVRPDGRELGEFRPTVLNIGSISTAEGSAIVKLGNTSVIC
GVKAELAEPKAETPQEGYLVPNVELSALCSSQFRPGPPGEQAQVLSQLMVNIIKNFHSVP
LEDLCVVAGKLVWVLYIDLICLDYGGNLIDACVLALTAALKNTALPSISVEEETQKINAD
ITKHNMLQLACTPISASFAIFDNTILLVDPTSEEEALSTGTVTVVTDGEKIFEMDKSGGS
QITSEQRQMCFRRAFQRHREGIKLIEDTMSSVDR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctttcagatgtgccctgccgaaagagtactacaggcagtttattgaaaga
gatgttaggccagatggccgagagcttggagaattcagaccaacagtactcaatattgga
agcatatcaactgctgaaggctctgctattgtcaaactcggcaacaccagtgtcatttgt
ggagtgaaggcagaactggctgagccaaaagctgaaacaccacaagaaggctacttggtt
ccaaatgtagaactatctgcattgtgctcatctcagttccgcccaggaccaccaggagag
caagctcaggtgcttagccagctgatggtcaatattatcaaaaattttcattctgtgcca
ttggaggatctgtgtgttgttgcagggaagctggtttgggtattgtatatagatctcata
tgtctggactatggaggcaacctcattgatgcctgtgttcttgccctcacagcagcattg
aaaaacactgccttgcctagcatatctgttgaggaggagacgcaaaagattaatgctgac
atcaccaaacacaacatgcttcagcttgcatgtacccctatatctgcatcatttgcaatc
tttgataacaccatattattggttgaccctacatcagaggaggaagctttaagtacagga
acagtaactgtggttactgatggggagaagatatttgaaatggacaagagtggtggaagc
caaatcactagtgaacaaaggcaaatgtgctttcgacgtgctttccagagacacagggaa
ggtattaagttgattgaggacacaatgagttctgttgatagatga
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