Pomacea canaliculata (golden apple snail): 112560574
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Entry
112560574 CDS
T05881
Name
(RefSeq) gem-associated protein 5-like isoform X1
KO
K13133
gem associated protein 5
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112560574
03041 Spliceosome [BR:
pcan03041
]
112560574
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112560574
mRNA cycle factors
P-body specific factors
112560574
Spliceosome [BR:
pcan03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
112560574
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_GEMI5
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Aladin
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR41
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_EIPR1
GEMI5_RBS
WD40_Gbeta
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_Nup120_160
Beta-prop_SPT8
WD40_RFWD3
WD_LRWD1
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
112560574
NCBI-ProteinID:
XP_025088285
LinkDB
All DBs
Position
LG3:complement(32394679..32468702)
Genome browser
AA seq
1933 aa
AA seq
DB search
MSLKSLPPSPNWYMSAISDANERGLYVYGAMQKVYVFDISVPSSGLRMLGYYPGHEDRVT
SVALCPNDEVSVFSNNQLTKTTLEASSEEKYAFGLSKESLAGSLCCSAGDDMVVKIWEVN
SFTDVQSHKEHKGKITTVSWCALNTNLIASGDERGEILLWNRKSNTIARWRQEKTYIYCT
AFCPHVPALLAVGVRQGTVFLVDFSSGTGYLVHRLRGHEDEVMSLSWCPIPGEAMLKSVN
EESSNEAEKEITRTDSGCLIATGSKDRTIRVWSCSKGQQVLLKKLPVQRREQDQGTRTKT
WVAVCWLKHNPELLVSSSSNGDLLLWNLLHGKGHSHSTFYAGEFKSHARPAFNICSGGAG
GNTLCTFSQDRTLMLWDAISSNAVCSLHTLGGFVYCLRSSPLDPGRVAVGVGDNVIRVWN
MSNKMNAYDITSFWQGIKNKVTAVSWHPVKEGILAYGTDDGRVAVLDIFSRKMPVTSGTL
HVRTVYVVAWGPSSGSAGTAESETFSLYSVGDCKILEHTTASLSRTDTKTEAINFSDLLI
KNNIEEVTCLKATEISWNLNLKAFAVGADDGVVYVFDTSTLKLLAVIKIHLKLINCVRWH
PKATSTSPNGSPCQSWLASGGNDQVLHVVDLSCVFAQKNLDRQIVMLNSSLRHFTGHTSR
ITDICWSPHHDGRLISVGYDAEAYVWDVQKGVALCQFKGHHGRLLTCQFSGLDPDLVITA
GTDSNVMVWRVSEQPIPNFGEQKKKKKKLTSSTTSLSAHQPAEISGEQSMSSRSNETENG
LNSVLQDLHDLLMTKELMLKQKDEKDVVAESSLKVSLDEIVVNEPIDENSLKDASKDKES
TCFMNQRSSSTSSTVCASDNVVGVPLSELDLEEEEVDDREADDLLQSREEGKDEMKTVST
AGGRRATSGIISAAVKGTHAGDLGSKKKWRPKAYFPATAKADNRNRAIIYEDLYLLTKLH
SQGVNSEEEPVGERSSLQADKFHLGLFTDRRGAYLCLQQEEEHHLNHENMEYALQMEVWK
GNITGAIQMARERGQLSDWIVSLAPLASYETWLALCEEYAEQLEEEGLYHKAVSYLLACH
KLYPAIDLFRRHKLFREAVALARVRLSPLDPVLEDLYTDWSEQLMRDGAYEQAAKCYLAM
KQIQDAAKVIARRCDQNSLQAACHLTLLANEKQQGQLYAQQVVTRYLANHQWKQALAFLK
EHQPLKVFIPYVSVHEMMVRELSALVPEMITPLEPESFLIWDSIPAEKASIPEFILDPSD
ADPVLPWETHLVDGHAFPHHILRVWYIHLNIAMATEQLHVMYHALQQLHSGRQIHLDTQQ
VLLQVCSDVMLWLLALLTNQTSLAISHLLGALSTLHDGGHHRLLTAVCRLLLPQGPKYML
KLQHEVTALRVLISMEAHTEVEGGGRHLSLRRYLSELKEEPSVSTGNVRCRQLDCVRAYY
YIAILHHLQDIYAKKIDDAHHIDLAKVSDAAARRVTSDSLDSENRKEISVNSGHLHIKES
SAGEMPKDNSVSSGDNVNGDRVVNDGGGDVEAQMCCSKIIVGAHKNGISEKHAAQKSGNG
ADIQEVFVKEETSSGDGRGHNPVAKEQPVVGDADRQRKSPTLISFENIGSGWCLTLAKLL
QLSKGLLWDIQAKRLALTETLGYIHRAISQHLLTDQSQEAARTLSRSSHAGNSHNHVHTV
VLHSHQAHSSPNTETVAAHLPDDPFLNINDNGGVSSGKDVCASASVTQASSCNSSSRSPL
KPNTTDISLSKVSDTQPPVPNLIKFSESDFNIDLATLGQQLDGSRRVLWEDDPVTVCVHG
HEGLRKVGDGSSQKPTCLLSPAKYINVPDEWYSLPVDEKYSASYVTLAVLKDEQDFVMGE
LKRMSDSQVLFPSPFMSMEFLLDVCVASSTMTTVDKEEYLKSLHSWALHFAVTSQQRGHV
EQLFVEAEKSIGL
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaaagtctcttcccccgtctccaaactggtatatgagtgcaatcagtgatgcc
aatgaaaggggactgtatgtttatggagcaatgcagaaagtatacgtctttgatatctca
gttccctcaagcggactgcgaatgcttggctattatcctggccacgaagatcgagtaaca
tcagttgctctttgtccgaacgatgaagtttcagtcttctcaaataatcagttgacgaag
acaacactggaggccagttctgaagaaaaatatgcttttggtttgtctaaagaaagctta
gctggttctttgtgttgtagtgctggagatgatatggttgtcaaaatttgggaagtaaac
agcttcactgatgtccaatctcacaaggaacacaaaggtaaaataacaacggtcagttgg
tgtgcccttaacactaatcttattgcaagtggtgatgagaggggtgaaattttgctgtgg
aacagaaaatcaaacactattgcacgatggaggcaagaaaagacctatatctactgtaca
gcattttgtcctcatgtgccagcattgcttgcagttggtgtacgccaaggaactgtattt
cttgttgatttctcatctggtactgggtatcttgtgcatcgccttcgaggtcatgaagat
gaagtcatgtctctttcttggtgccccattccaggagaggcaatgctgaaaagtgttaac
gaggagagcagtaatgaagcagaaaaggagattactcggacagattcaggctgccttata
gccacaggttctaaggatagaaccatccgtgtgtggagttgcagcaaagggcagcaggta
cttttgaaaaagttacctgttcagcgccgtgaacaagatcaaggaacacgcaccaagaca
tgggtggctgtgtgctggctgaaacataaccctgagctccttgtgtctagttcttcaaat
ggagatctactgttgtggaacttgctgcatgggaagggtcattctcactctactttctat
gctggggaattcaaaagtcatgctcgtccagcattcaacatttgtagtggtggagcagga
ggaaatactctctgcacattctcacaggacagaacactaatgctgtgggatgccatcagt
agtaatgctgtctgttctttacacacccttgggggtttcgtttactgtctccgcagctct
cctcttgatccaggtcgtgttgcagtaggtgttggagacaatgttattcgtgtatggaac
atgtcaaacaagatgaatgcttatgacattactagtttttggcagggtataaagaacaaa
gtcacagctgtaagctggcatcctgtgaaagagggcatcctggcatatggaacagacgat
gggcgtgtggctgtgttggatatcttctctcgcaaaatgcctgtcacctcaggaacattg
catgtccgtacggtgtatgttgttgcttggggaccgtcatcaggttctgctgggacagct
gaatcagagactttctccttgtactcagtaggagattgtaaaatcctggaacacactact
gcctctctgagtaggacagacaccaagactgaagcaatcaatttctctgaccttctaatt
aaaaacaacatagaagaggtaacctgtttgaaagcgactgaaatttcatggaatttgaat
ttaaaagccttcgcagtgggagctgatgatggtgtagtttatgtttttgacacaagcact
ttgaaactgctagcagtaatcaagatccacttgaaacttattaattgtgtgcgctggcat
ccaaaagccacaagtacctccccaaatggctcaccatgtcagtcatggctggcttctgga
ggaaatgaccaagtgcttcatgtggtagatttatcctgtgtgtttgcacaaaagaacctg
gacaggcagattgtgatgcttaatagcagtcttcgacatttcactggccacactagccga
atcactgacatttgttggagcccccatcatgacggccgtcttatatctgttggatatgac
gctgaagcctatgtgtgggatgtccagaaaggagttgctctctgccagttcaagggccat
catggccgcttactgacctgccagttctcaggacttgatcctgatcttgtgattactgct
ggaacagatagtaatgtgatggtgtggcgtgtatcagagcaacccattcctaactttggg
gaacagaaaaagaagaaaaaaaagttgacatcttctacaacaagtttgtctgcacaccag
cctgctgaaatatcaggagaacaatctatgagtagcaggtcaaatgagacggagaatggt
ttgaattcagtattacaagatctgcatgatcttttgatgactaaagaactgatgttgaag
cagaaggatgaaaaagatgttgtggcagaaagcagcttgaaagtgtctttggatgaaata
gtagttaatgagcctattgatgagaattctttaaaagatgccagtaaagacaaggagtcc
acatgcttcatgaatcaaagatcatcttcaacatcttccactgtttgtgcctctgataat
gttgttggtgtgccattatctgagctggatttagaagaggaggaagtggatgacagggaa
gcagatgatctacttcaaagtagagaggagggcaaagatgaaatgaagactgtaagcaca
gctggtggtaggcgagctacatcaggaatcatttcagctgcagttaaaggtacccatgct
ggtgacctggggtcaaagaaaaagtggaggccaaaggcttacttcccagctactgccaaa
gcagataacagaaaccgagcaattatttatgaagacctgtatttgttaaccaagttacat
tcacagggagtgaactcagaagaagagcccgttggtgagcggtcctctttacaagcagac
aaatttcacctgggtctcttcacagatcgtagaggagcatacctctgtcttcagcaagaa
gaggaacatcacctgaatcatgaaaacatggagtacgcgctgcagatggaggtatggaaa
ggcaacatcactggcgccattcaaatggctcgcgaacgggggcagctctccgactggatc
gtctccttggcccctctggcgtcttacgagacgtggctggcattgtgtgaagaatacgca
gagcagctggaagaggaaggactgtaccacaaggcggtctcctatttgctggcttgccac
aaactgtacccggcaatcgacctcttccgtcggcacaaactctttagagaagcagttgct
ctggcccgtgtaagattatcacctcttgacccagttctggaagatctgtacactgattgg
tccgaacagctgatgcgtgatggggcatatgaacaggcagcaaaatgctatcttgcaatg
aagcagattcaggatgctgccaaagtgattgcacgccgctgtgatcagaattcacttcag
gcagcctgccatctgacacttttggccaatgagaagcagcaaggacagctgtatgcacag
caagtggttactcggtacttggctaatcaccagtggaaacaagctcttgcctttctgaaa
gagcatcagcctctgaaggtatttattccttatgtaagtgtacatgaaatgatggtccgt
gagctatcagccttggttccagaaatgataacgcctttggaaccagaatcatttttgatt
tgggatagtatacctgctgaaaaagccagtattcctgaattcatccttgatccatctgat
gctgatcctgtcttgccatgggaaacacacttagttgatggacatgcctttccacatcat
atacttcgtgtgtggtatatacatctgaatattgccatggcaacagaacagttgcatgtt
atgtaccatgcccttcagcaactgcactcaggtcgtcagattcacttagacactcagcag
gtactgctgcaagtgtgcagtgacgtgatgctgtggctgttagcacttctcaccaaccaa
acatcactggctatctctcatcttcttggagcattgtccaccctccatgacggaggtcac
cataggcttctcacagcagtttgtcgcctcttactgccacaaggtcctaaatacatgttg
aaactacagcacgaagtcacagcactgagagttctgatcagcatggaggcccacactgag
gtagagggtggtggcagacaccttagccttcgtcgctacttgtcggaactgaaggaagaa
cccagtgtttctactggaaatgtgcgatgccgacagctagactgtgttcgagcatattat
tatattgccattttgcaccacttacaggacatatatgccaaaaagattgatgatgcacat
catatagatttggccaaggtcagtgatgcagctgctaggagagtcacttcagattcttta
gacagtgaaaatagaaaagagatctcagtaaattctggacatttacacataaaagaaagc
agtgctggtgagatgcctaaagataatagtgtttcatcaggtgacaatgttaatggtgac
agagttgttaatgatggtggaggagatgttgaagctcaaatgtgttgcagtaaaataata
gttggtgcacataaaaatggcatcagtgaaaagcatgcagctcagaaaagtggcaacggg
gctgatattcaggaggtgtttgtaaaagaggagacctcaagtggtgatggaagaggtcat
aatcctgtagccaaagaacagcctgtggtgggtgatgcagacaggcaaagaaaatcaccc
actttgatcagttttgaaaacattggcagtggttggtgtttgactttggcaaagttactt
cagctttctaaaggtctgctttgggatattcaggccaagcgtcttgctctgactgaaact
cttggttatattcatagggcaatctctcaacatctgctgacagatcagtctcaagaagct
gctcggacactatcacgcagttctcatgccggtaacagccacaaccatgtccacactgta
gtgttgcacagccaccaagctcactcttcgcccaacactgaaactgtagctgctcacctg
cctgatgacccattcttgaacattaatgacaatggtggtgtctcatcgggtaaagatgtt
tgtgcttctgcctcagttacccaagcatcttcctgcaactcttcatctcgtagtccctta
aaaccaaacaccactgacatatcattgtcaaaagttagtgacactcagccccctgtgcca
aacctcattaagttttcagagtcagactttaacattgatcttgcaacactgggtcagcag
ttggatggatcacgacgagtattatgggaggatgatccggtaactgtctgtgtacatggc
catgagggccttcgaaaagttggcgatggaagcagccaaaaaccaacctgcttactgagc
ccagctaaatacatcaatgtccctgatgagtggtattctctgccagttgatgagaagtat
tctgcgtcatatgttactttggctgttttgaaggatgagcaggattttgtcatgggagag
ctgaagcgtatgtctgacagtcaggttctgtttccaagcccatttatgagcatggaattc
ttgttggatgtgtgtgtggccagttctaccatgacgactgtagacaaggaggaatatctg
aaaagtcttcattcatgggcattacattttgcagtaacttcacagcaaagaggtcatgtt
gaacaactgtttgtggaggctgagaaatcaattggactttga
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integrated database retrieval system
