Pomacea canaliculata (golden apple snail): 112560831
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Entry
112560831 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112560831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcan03009
]
112560831
Ribosome biogenesis [BR:
pcan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112560831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_Nup120_160
WD_LRWD1
Utp12
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
112560831
NCBI-ProteinID:
XP_025088686
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Position
LG1:complement(27638850..27651671)
Genome browser
AA seq
783 aa
AA seq
DB search
MGSTKTNLTIADKYDAFYTGGIIQFSKDGNFMFCCCGQNVKAVELNTGKIRSSFGQEAED
ITSFCLSPDDEFLVITTQNLLLRQWRWKDEILVRSWRAIHTTPVMSMTFDPTSTLVATGG
SDMLIKLWDVLHQYCTHNLRGHTGVVRLVQFHPDISKLQLISAGDDYTVRVWNLKTSTCM
VVNRDHHSLVTGLCFTKDGDVMYSCSRDSVVCIWDMIKLCVVKILPVFESVESVMAIAQL
PMLQGADPQDHFVTAGTGGTLKIWNKNTGACLHTNRSLCEEKTEEGKTIITQALYSEVLG
KVVIAMYDHNILFLNADFSYYKQYSGHLEEVLDVAFLGENSSHIIVLSNSSKIKVFCLSN
MACQILGGHLDTVLAVSSQPKNNLFATASKDNSVRVWRFHPDAGNITCIAVGQGHTQAVH
SVAFSKLSSNFLVSGSEDSTLKLWSLPPVAKLDSDHITTLHTISTECAHEKDINFVTVAP
NDKFIASASQDKTAKLWSLPDLSLKGVVRGHRRGVWCVQFSPVDRCFATSSADGTIKLWN
LTDFSCLQTFEGHDSSVLRVIFISNGRQLISSDSEGLLKLWTIKTKVCEKSFDAHDSKAW
ALAVHPNEDIIITGGGDSTLLTWKDTTKEEMQQAQEQRENLVLQEQKLSNYIQEKKLLKA
IGLAISLGQPFRVLTIMKDILETPTGLEDLENVLAQLQVDQMGTLVSYAAQWNTNSRHCY
CAQVVVNILLKTLTSDQILALPNFQSSLEALIPYTERHLHRINRLQQQVTFVDYTWTCMK
SGM
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgggctctactaaaacaaacttgaccattgctgataaatacgatgcattttacactgga
ggaataattcagttcagcaaagatggcaatttcatgttctgctgctgtggtcagaatgtc
aaagctgtggaacttaatacaggaaagattcgaagttcatttggtcaggaagctgaagat
atcacatctttttgtctgagccctgatgatgagtttctggtgatcactacacaaaacttg
ttgctgcggcaatggcgttggaaagatgaaatactggttaggtcctggagagcaatccat
acaacacctgtcatgtccatgacttttgaccctacatcaaccttggttgcaacaggagga
agtgacatgctgattaaattatgggatgtcttacatcagtattgcacacacaatctccga
ggacatacaggtgtcgtcagattagttcagtttcatccagacatctccaaactgcagctg
atatcagctggtgatgattacacagtccgagtctggaaccttaagacaagcacatgcatg
gtagtcaacagagaccaccacagtcttgtcacaggactgtgttttaccaaggatggtgac
gtaatgtacagctgcagtagagactcggttgtttgcatctgggacatgatcaagctatgc
gttgtcaaaatattacctgtttttgagagtgttgagtccgttatggccattgctcagtta
cctatgcttcaaggagctgaccctcaagatcattttgtgacagcaggcactggcggtaca
cttaagatttggaacaagaacacaggtgcatgtttacacaccaacagatccctctgtgag
gagaagacagaggaagggaagaccattatcacacaagcactgtacagtgaagtcctaggc
aaagtggttatcgccatgtatgaccataacatcctgttcttaaatgcagatttttcatat
tataaacagtattcagggcatctggaggaagtccttgatgttgctttcttgggtgaaaat
tcttcacacattatagtccttagcaacagcagcaaaatcaaggtcttctgtctcagcaac
atggcttgtcagattttgggaggtcacttagatactgttttagctgtcagctcacagcct
aaaaataacctctttgcgacagcttccaaggacaattctgtgcgagtctggagatttcat
ccagatgcaggcaacattacctgcattgctgtgggacaaggacatacacaggctgtgcat
tcagttgcattttctaagttatcatcaaatttcctagtctcaggcagtgaggattcaact
ttgaagctgtggtcacttccacctgttgcaaaattggactctgatcacataactactctt
cacacaatatctacagagtgtgcacatgaaaaagacatcaattttgttacagttgctcct
aatgataaatttattgcatcggcatcacaggataaaacagctaagctttggagccttcct
gatctcagtttaaagggtgttgttcggggccacagacggggtgtctggtgtgtccagttt
tctcctgtggatcgttgctttgcaacgtcttcagctgatggaacaatcaaactatggaat
ctgaccgatttctcctgtttgcagacatttgaaggtcatgacagttcagtactgagagtt
atatttatcagcaatggcaggcagctgatctcaagtgattctgagggccttctgaagctg
tggactataaaaacaaaagtatgcgaaaaatcttttgatgctcatgacagcaaagcatgg
gctttggctgtccatccaaatgaggatatcattataactggtggtggggattctaccctg
ctcacctggaaggacacaaccaaagaagagatgcagcaggcacaagagcaacgagaaaac
ttggtgctgcaggaacagaaactgtccaactacattcaggaaaagaaacttctgaaggcc
atagggctagcaatctctctagggcagcctttccgtgttctgaccattatgaaagatatt
cttgagacaccaacggggctggaggacctagagaatgtattggcacagctacaagtggat
caaatggggacacttgtgagctatgcagcccagtggaacacaaacagtcgacactgttat
tgtgcacaggtggttgtcaacatacttctcaagactcttacttcagatcagattctagct
ttgcctaatttccagtcatctttagaagctcttattccatatacagaaagacatctgcat
aggattaacagattgcagcaacaagtcacatttgtggattacacttggacttgcatgaaa
agtggaatgtga
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