Pomacea canaliculata (golden apple snail): 112560909
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Entry
112560909 CDS
T05881
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
112560909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcan03009
]
112560909
Ribosome biogenesis [BR:
pcan03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
112560909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
WD40_MABP1-WDR62_2nd
EIF3I
Cytochrom_D1
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
PROPPIN
Beta-prop_IFT140_1st
DUF3085
S-Me-THD_N
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
112560909
NCBI-ProteinID:
XP_025088805
LinkDB
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Position
LG3:20780223..20792844
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AA seq
499 aa
AA seq
DB search
MLRQAAKRKQEKCASEVKELTKTDHAVNLHPEAIPLGTTPYQNEEEWRVERQVLGGEDEI
LEKLAQTVKPLSQKKKNAASINAVSRRPAWDDPDDLAVVKVKRKKKKDAKWSKAVEEISG
QEYINKLKAQFENVTSGTPSWAKLPSERQDLSDEDSDVDQLLTSTGTYLATSSALSSGAL
QIKRCRDANAEAPSKGRLSKVQFHPSAQVLMTASIDASLRFFQVDGKNNPKIQSVFLDNF
PIMSASFSAGGLEVIMGSRHCSFYWYDMMAGKVVFVPKIKGLGERNMARLKVTPDGQFIV
FLGDCGQMHLLSGRTKEWIHTFKMNGTVEDVAFSADGCHMYSTGGDGQVYIWDLKTRDCI
HHFVDDGCVHGTCLALSSDSQYLACGSNTGVVNIYNTKDCLSSASHKPLKSIMNLTTSCT
SSVFNPSTEILGLASNFTEKAIKLVHLPSLTVFSNFPEFNDTKLHIPWTMDFSVNSGYMA
VGNHKGNALLYRLQHYGSY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtcaagcagccaagaggaaacaagagaaatgtgcctcagaagtgaaagaactg
acaaaaacagaccatgctgtcaatttacatccagaagcaatacctttaggtacaacacca
tatcagaatgaggaggaatggcgtgtggagcgacaagttttgggtggagaagatgaaatc
ttggaaaaattggctcagactgtgaaaccactgtctcaaaagaagaaaaatgctgcatcc
atcaatgctgtgagcagacgtccagcttgggatgaccctgatgatctggcagtggtgaaa
gtcaagcgaaagaagaagaaagatgcaaaatggagcaaggcagtcgaagagatcagcggt
caagagtacatcaacaagcttaaggctcaatttgagaatgtgaccagtggtactccatca
tgggcaaaactgccttctgagcgtcaagacttgtcagatgaggacagtgatgtagatcag
ttgttgacaagcacaggaacctacctggcaacatcatctgcactgtcttctggtgcttta
caaatcaagcggtgccgagatgctaatgcagaggctccaagcaaggggaggttgagcaaa
gtacagtttcaccccagtgcccaagttcttatgacagccagcatagatgcatcacttcgt
ttcttccaggttgatgggaagaataacccaaagattcagtctgtgtttttggacaacttc
cccattatgtctgccagttttagtgctggaggtctagaggttatcatgggatccaggcac
tgtagcttttactggtatgacatgatggctggaaaagtggtctttgtgccaaagataaaa
ggtttaggtgagagaaacatggcaaggctgaaggtgacaccagatggtcaatttattgtc
tttctgggagactgtggccagatgcacttgttatctggaaggacaaaagagtggatccac
acattcaagatgaatggtactgtggaggacgtggcattttctgctgatggatgtcacatg
tattccacaggaggagatggccaggtctatatctgggatctcaaaacaagagactgtatt
caccattttgtggatgatggatgtgttcatggaacttgtcttgcactgtcttcagactct
cagtatttggcttgtggttcgaacactggtgtggtcaacatatacaataccaaggactgt
ctttcctctgcgtcacataaaccactgaagtccatcatgaacctcactacatcctgcact
tcatcagtcttcaacccttcaacagaaattttgggcctggcttcaaatttcacagaaaaa
gccatcaagctggttcacttgccatcactcacagttttttccaactttcctgaatttaat
gatacaaagcttcacatcccatggacaatggacttctctgtcaacagtggttacatggct
gttggtaatcacaagggaaatgcactactgtataggttgcaacactatggaagctactaa
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