Pomacea canaliculata (golden apple snail): 112561254
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Entry
112561254 CDS
T05881
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pcan01009
]
112561254
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112561254
Protein phosphatases and associated proteins [BR:
pcan01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112561254
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
112561254
mRNA cycle factors
Stress granule specific factors
112561254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DND1_DSRM
Motif
Other DBs
NCBI-GeneID:
112561254
NCBI-ProteinID:
XP_025089401
LinkDB
All DBs
Position
LG4:11820997..11835363
Genome browser
AA seq
739 aa
AA seq
DB search
MSQIVNQPGQNQGTSFQGILTTSTGGPPPLRFPGKTAVLATKVSQYSQLSAMQQSQHLTP
HSNPSMAASTLIGSGGVIYGSSMSTEKAGTASVHSTQQAAGEMQNGTTAGGVTTGKAGGA
GVAPSKGQNQAAPVCQPLGKVGEGADKNVANTKEKTPMCLINELARYNKVAHQYTLVDEQ
GPAHKKIFYVKLKLGEEEYSAFGESIKKAQHAAAANALETTKFPHPVPKAPRYQIDANDS
SNITPTVELNALAMKRGEPAVYKLIETRSQQQMYPQQNMDYRGLYNQRYHYGRPPRPFYV
LLKVGLREFIGDGPTRQAARHSAASKALSVLKNLPMPRENKVKIEAEECADGEDAMKSEI
SLVHEIALKRNLAVNFEVIRESGPPHMKTFVTVCQVGEFVTEAEGNSKKVSKKRAAELML
DDLRKLPPLPSSTLKPKLKQPNNKKKNRNIIKVQKADPSYGVGINPISRLIQIMQAQKKK
EPIYTLLAEKGLPRKREFVVQVQVEEHVTTGAGPNKKLAKRNAAESMLQLLGFSRPSPQP
IKSAIKSSQSTEPGSSDKKVTFVDGSKPYGNGVETTGTSICQMAPGLLRINQITGLVSAS
SPALSFPGQAESKTSVLPGSGPRAEQQLNEIASRLGISIKFDEFSKINNSEHLTCVTLST
APPQMHHGTGPTVEASRDAAALAAIHTLLNASVTLNSEALQDQGLKQNLHPFPPPCPIDL
QVLETNCEHLVVASCLECH
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagatagtgaatcaaccaggtcagaaccagggtacatcttttcaaggaatctta
actactagcactggaggcccaccacccttgagattccctggaaagactgccgttcttgca
acaaaagtatctcagtatagtcagctctctgccatgcagcagtcacagcatcttacccct
cacagcaaccccagcatggctgcatctactttgatagggagtgggggagttatttatggg
tcttcaatgagcacagagaaagcaggaacagcttcagtccactccacacagcaggcagcg
ggggaaatgcagaatggaaccactgctgggggagtgaccacaggaaaggctgggggagca
ggagtggccccgtctaagggacagaatcaggctgctcctgtctgccagcccttagggaag
gttggggaaggagcagacaaaaacgtggcaaacacaaaagagaagacgcccatgtgtctt
atcaacgaactcgcacgttacaacaaggtagctcaccagtacactctagttgatgaacag
ggcccagcccacaaaaagatcttctatgtcaaattgaagctgggtgaggaagagtattca
gcctttggggagagcatcaaaaaagcccagcatgcagcagcagccaatgcactagaaacc
accaagtttccccacccagtgcccaaagctcctagataccagattgatgcaaatgactcc
agtaacataacacctactgtagaactcaatgccctggccatgaagcgtggcgagccagca
gtatacaaactgatagaaactcgtagccagcagcagatgtatccacaacaaaacatggac
tatcgtggcttatacaatcagagataccactatggtcgtcctccaagacctttttatgtc
ctactaaaagttgggctgcgtgaatttataggagatggtcccacacggcaagctgcacga
cacagtgcggcatcaaaggccctttctgttctgaaaaacttaccaatgcccagagaaaac
aaagtcaaaatagaagcagaagaatgtgctgatggagaagatgcaatgaagtctgaaatc
agtttagtgcatgaaatagctttgaaaaggaatcttgctgtcaactttgaggtgatacgg
gagtcaggtcctccacatatgaagacttttgtgacagtttgtcaggtgggagagtttgtc
acagaggctgaaggcaattctaaaaaggtgtcaaagaaacgagctgcagaactgatgtta
gatgatctcagaaaattgcctcccttgccatcttccaccttaaaacccaagctgaaacag
cccaacaacaagaagaagaatagaaatattattaaagtccagaaagcagaccctagctat
ggtgtaggcataaatcccataagtcgactcattcagatcatgcaggcacaaaagaaaaaa
gaaccaatttacaccttgttagcagaaaaaggacttccacgcaaacgagaatttgttgta
caggtgcaagtggaagagcatgttacaactggggctgggcctaataaaaagctggccaag
cgcaacgctgctgagagtatgctgcagcttctgggcttcagccgtccttcccctcagccc
attaaatctgctataaaaagttcacagtcaactgagcctggttcatctgacaagaaagtg
acatttgtagatggcagcaaaccatatggtaatggagtcgagacaacaggcaccagcata
tgtcagatggcgcctgggttgctgcgtataaaccagattacaggccttgtctcagcttct
tcacctgccctctccttcccaggtcaggcggagagcaagacatcggttctgcctggttca
ggtcctcgagcagaacaacagctgaatgaaatagcttcccgcttgggcatatctatcaaa
tttgatgagttctccaagattaataattctgaacatcttacctgcgtcacactgtcaact
gcccctccccaaatgcatcatgggacaggacccactgtggaggcttcccgagatgccgca
gctctagcagccattcacactctcttaaatgcctctgttactctcaacagtgaagctttg
caggaccagggattaaaacagaacctgcatccatttccacctccctgccccatcgactta
caagtgctggagacaaactgtgaacaccttgttgtggcgtcatgcttggagtgtcactaa
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