Pomacea canaliculata (golden apple snail): 112561296
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Entry
112561296 CDS
T05881
Name
(RefSeq) THO complex subunit 5 homolog B-like isoform X1
KO
K13174
THO complex subunit 5
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112561296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112561296
03041 Spliceosome [BR:
pcan03041
]
112561296
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112561296
Spliceosome [BR:
pcan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112561296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
112561296
NCBI-ProteinID:
XP_025089479
LinkDB
All DBs
Position
LG4:complement(34271154..34286466)
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AA seq
695 aa
AA seq
DB search
MSRDANADKKKKRILKPDSVIETKKTKIQDGASSKDHESLLFHAEEEEAEARDAEQDVQL
FKSACSSIRDNMKFIQGMKKQKAGAEDLEAKKIDVSLQFVMLKKLNRLAHFRCRRAREAT
NEAKQQIEKYHLQLQNLLYETMHLQKEITKCLEFKSKDEEVELVTVDEFYRDAPERISRP
KITKEDPHQLTLARLEWELEQRKELAGKLQEAQLCKEKISQEIRSKEDYLDTLQPKLISI
LEATKPVQNYLKMPYDEVREQHQTARHLPLPLYVLYMQGSAYQQACDKYLRVNVEGDVNA
AKSLSLEIPEPDDDSDSDQDDQDQEKRNSKRRRKTVEARLCDKKQKVICKHPLSVTMEIS
GKEGSTLHLTLSYLPALNIITVGVNVLPSKDVVTSCITGGDLLSPQSILDELYPGDHGET
TPNPASQYELGRYGMGDFSQYVAQLGRPYIWAQWLGGLQFLESCELEGACCSAQVRPNTS
VSATYMQQTIKRLRQRLKSRLGLLQQLASLERGIVSISGPVLKTFPVKVTSQLMSWKRVT
HSDFAVLPHAKAILDAGFANKNDLYFLAILERGSARLSAHVVVSVDYPEVAPVFVTSVAW
QTQRTAINDIHIKEMEEEVNVHYAELTVDKSQEQLLSCQLQRLLVCFDVYLETEVVDVSA
PVEIPKEKVIPRVCRGPGRNKPYRYVPELAIFTQR
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggacgccaacgccgacaagaaaaagaagcgaattttgaaacctgactcggtg
atagaaaccaaaaaaactaaaatacaagatggtgcatcttcgaaggaccatgagagcctg
ctgtttcatgctgaggaggaagaggcagaggcgagagatgcagagcaagatgtacaactg
tttaaatcagcctgcagttccattcgtgacaacatgaagtttatccaaggcatgaagaag
caaaaagcaggtgctgaagatttggaggcaaagaaaatagatgtgtcactgcagtttgtg
atgttgaaaaaactgaaccgtcttgcccatttccgatgccgaagagctagagaagcaact
aatgaggctaaacaacagattgagaagtatcaccttcagctgcagaacttgctgtatgag
acgatgcacttacagaaggaaatcacaaagtgtctagagttcaaatctaaagatgaagaa
gtggaacttgtgactgttgatgagttctaccgtgatgcacctgaacgcatttcacggccg
aagatcaccaaggaagaccctcatcagctgacactggcacgcctggaatgggagcttgag
cagagaaaggaacttgctggcaagctgcaggaggctcagttgtgcaaagagaagataagc
caagaaatccgcagcaaggaagactatcttgacactcttcagcctaagcttatttccatc
ttggaggccacaaagccagtacagaattacctcaagatgccatatgatgaagtacgggaa
cagcaccagacggctcgacacttgcctctgcctctatatgtcctctacatgcagggaagt
gcataccagcaggcatgtgataaatacctgagggttaatgtggagggggatgtcaatgct
gccaaatctctgtccctagagatacctgaaccagatgatgacagtgacagtgaccaggat
gaccaagatcaggagaaaagaaactctaaacgtaggcgtaaaacagtagaggctcgtttg
tgtgacaagaaacagaaagtcatttgcaagcacccactgtctgttaccatggaaatctct
ggcaaagagggcagcactttacatctgacattgagctacctcccagcactcaacatcatt
acagttggggtcaacgtccttcccagcaaagatgttgtgacaagctgtatcactggagga
gaccttttgtcaccacaatcaatacttgatgaactttaccctggagaccatggggagaca
actcctaaccctgccagccagtatgagctggggcgctatggcatgggagactttagtcag
tatgtggcacagctggggcgaccctatatatgggcacaatggcttggtgggctgcagttt
ttggagagctgtgaacttgagggagcatgctgtagtgcccaggtccgtccaaacacatct
gtcagtgccacctacatgcagcagaccatcaagcggctgcgtcagcgactgaagtcacga
cttggcctgctgcagcaactggcctccctagaacggggcattgtgtcaatctccggacct
gtgctgaaaacgttccccgtcaaggtcacttcacagctcatgtcgtggaagagagtaact
cacagtgattttgctgttcttcctcatgcaaaggccatcctggatgctgggtttgccaat
aaaaatgacctgtactttcttgccatcttggagagaggatcagccagattatcagctcat
gtagtggtcagtgttgactatcctgaggtagcgcctgtgtttgttaccagtgtggcatgg
caaacacagagaacagcaataaatgacatccacatcaaggagatggaggaggaggtaaac
gtccactacgctgagctcactgtggacaagtctcaggaacagctcttatcctgtcagttg
cagcgcttgctggtttgctttgatgtttatttggagacagaagttgtggatgtgtcagca
cccgtggagattccaaaagaaaaggtcatccctcgtgtgtgcagaggacctgggcgaaac
aaaccctacagatacgtgcctgagctggcaatcttcacccagagataa
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integrated database retrieval system
