Pomacea canaliculata (golden apple snail): 112561311
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Entry
112561311 CDS
T05881
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
KO
K12857
Prp8 binding protein
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112561311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112561311
Spliceosome [BR:
pcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112561311
Complex C
U5 SnRNP specific factors
112561311
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
NBCH_WD40
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Ge1_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_HPS5
WD_LRWD1
PEP5_VPS11_N
Beta-prop_IFT140_2nd
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
112561311
NCBI-ProteinID:
XP_025089499
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Position
LG4:18087542..18093472
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AA seq
347 aa
AA seq
DB search
MDLKRKAMDGALVVAKKPRNELVAVSGDENMSLMQTGPPRTSNLLAPIMLLTGHEGEIYT
AKFSPDGHFLASAGYDRLIYFWAVYGECENFAILKGHTGAVMELQFSTDGTMCFSCSTDK
TLAVWDTEAGVRMRKLKGHQSFVNSVSPARRGPQYLCSGSDDGTIKMWDARKKGVINTFQ
STYQVTAVSFNDTAEQIFSGGIDNDIKVWDLRKNDVAYRMRGHSDTVTGLKLSPDGSYLL
SNAMDNTLRIWDVRPYAPQERCVKIMSGHQHTFEKNLLRCTWSPDGSKVASGSGDRFVYV
WDTTSRRIIYKLPGHAGSVNDVDFHPYEPVLLSCSSDKQIYLGELDQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaaacgcaaggccatggatggtgctttagtggtagcaaagaaaccacggaac
gagcttgttgctgtttcgggcgacgaaaacatgtctttgatgcagacgggaccaccaagg
acttcaaaccttttggcccctatcatgctgctaacgggtcatgagggcgagatttacaca
gccaagttctcaccagatggtcattttctagcatctgcgggctatgataggcttatatac
ttttgggcagtttatggagaatgtgaaaactttgcaatactaaaggggcatactggtgca
gtaatggaactgcaattttcaacagatggaaccatgtgcttctcgtgctcgacagacaaa
acgttggcagtatgggacacagaggcaggagtaagaatgcgaaagttgaaaggtcatcaa
tcttttgtcaactcggtgagtccggcacgcaggggaccccagtatctgtgcagtggtagt
gatgatggcactatcaagatgtgggatgctcgtaagaagggtgttatcaacacctttcag
tcaacatatcaagtgacagcagtttcttttaatgacacagcagagcagattttttctgga
ggaattgataacgatatcaaggtttgggatcttcgtaaaaatgatgtggcataccgcatg
cgaggccattcagatactgtgacaggtttgaagctaagccctgatgggtcttaccttcta
tctaatgcaatggacaacactttgagaatctgggatgtccggccatatgctccacaagag
cgatgtgtgaaaatcatgtcaggccaccaacacacatttgaaaagaatctgcttcgttgt
acctggtcaccagatggcagcaaagtggcctcggggtctggtgatcgctttgtttatgtc
tgggacacaacatctcggcgcataatttataaacttcctggtcatgcaggctctgtcaat
gatgttgattttcacccatatgaacccgttttattgtcatgttccagtgacaaacagatc
tatcttggggaactggaccagtga
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