Pomacea canaliculata (golden apple snail): 112561640
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Entry
112561640 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: usherin-like
KO
K19636
usherin
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcan03037
]
112561640
Cilium and associated proteins [BR:
pcan03037
]
Primary cilia and associated proteins
USH complex and associated proteins
112561640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
fn3
Laminin_N
Laminin_G_3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
EGF_LMN_ATRN
F5_F8_type_C_2
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
112561640
NCBI-ProteinID:
XP_025090013
LinkDB
All DBs
Position
LG4:19761198..19779898
Genome browser
AA seq
1395 aa
AA seq
DB search
MTNLASERPIQTFPAQSTCGAGTRNAYCESTTDPVSVQVCNQKFCDQTCPGRTALPSFSN
MLNGNSDGYLMCVDPDTVNVRPGSSPGDSAMSFSSTGATCYLVPGSKPDVGANGAFTITA
WIWLDMQGQSKAFTRTLLEKRTSSGLTILRVLVGSGGVTVMFASPSGQQQMTMNYAISQQ
NWTHLAIQAYLASEVQNRSLSFFVNGLRASFMPVSTVTPADFITDSSGTFRVGQSFDGTL
QFLGKIQDFRFYSDTLSNREVQEIYSGTLPQVRIQSACRCPGSRPRVKPQDTRYCLPNGV
PDNVGTVTLRVSSAYQPVEYANDNNTSTMWVSNFQDDVILEVDLGDQFEVFYMGIVFYSP
LPEAMVVERLLKGEVTWQTWQYYAVNCISYFGLQNNGPLPNATSVNCLQLGFASLPLSYS
KGSITLNLLPTEPVPRPGSSNFFNNPLLQQFVQASKVRVRFRNHTLITNIRHEYYAVFDF
SVTGRCDCNGHASSCNTSSFPYKCFCTEESHTQGDKCNECQPLYNNKAFKRGNLQQSYNC
QPCNCYGHATSCIYNASLDAFPEVWTDGGGGVCMNCQDNTEGRFCERCKDGFFRPTGKSL
SDKDMCSTCSCNTNGTVNATSLCEKDGGNCLCKDYVDGRACDRCKIGYYSLQAVNPSGCT
ACQCDVRGTVNGDPSCNETTGICNCKDNVRGSFSWTTSSVFHATVIHLDLKSLYCDPSTG
QCLCKXECTGHKCDQCVDRFYNFDAGCIPCDCIDAGTVNGTFCNRITGNCTCKANTVGRN
CGACRQGTYNFGVSVDLGCQDCSCNTAGTISGQTQCNVSTGACICKANVQGLQCNTCKTN
TYGLSTDLVEGCRACDCDTSGTVNQQQACDQNTGQCLCVSNREGNRCDTCTTGYYKIAGT
MGCLPCNCNPDGTLPYTNCDKNTGQCECRTNLGIGGRDCSQCMEGFYNFVSGKCTPCNCN
TFGSVNATCNMITGNCTCKLFTEGRDCGSCQADSSNLMAGNPYGCSKAPSQQPTPVYTPL
SPTAMTLTWRPPDYPNGLISSYQLYRNNTKIYEGPANSYNDTGLRPYTLYAYRVEAINIQ
GSASSPIVIFRTNPGIPSSDMVLIVTEIAVTSARCMWNEPSQLNGPLLRYELVSYDLANQ
SVSKVEWSGLAREQLLTSLRPYFRYNLTVRACTQGGCSESAGVQFLTKSAPPAGMQAPLI
IALSSSVLLITWQPPLAPNGIIIFYEFILDPPATNYTATGLSPFTVYEFQVLAENSAGKA
ASPWTSGRTQEATPLLMSAPVLTGLSSTVMSIVWRVPDDSSARGNITVYRIYQQRYRDLT
LDPYGPPTYWQLILELPGSVHSYNVSGLTHTQKTHSKWRPVTIKVVSTAPLLQAAHVLQP
LMAWRNRWLMALTLQ
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatttagccagtgaaagacctattcaaacatttccagcacagagcacatgtgga
gctggaaccagaaacgcctactgcgaaagtacgacagatccagtgtccgtccaagtgtgc
aaccagaagttctgtgaccagacctgccccggcaggacagctcttccgtctttttccaac
atgttgaatggtaacagcgatggatacctgatgtgcgtggaccctgataccgtaaatgtg
cggccaggttcatcgccaggcgactctgcgatgtccttttcaagcaccggggctacctgc
tatctggtgccgggctcgaaacctgatgtaggtgccaacggtgctttcacgatcacagca
tggatttggcttgatatgcagggacaaagcaaggcgtttacaaggacactgcttgagaaa
agaacatcctctggactgacaatactgcgtgtgctagtaggaagtgggggagtgaccgtg
atgtttgccagtcccagtggtcagcagcagatgaccatgaattatgctatttctcagcag
aactggacacatttggctatacaggcatacctggcatcagaggtacagaacagaagtctg
agtttctttgtgaatggcctaagagcaagctttatgccagttagtactgtaactcctgca
gactttatcactgactcctctggaacattccgagttggacagtcatttgatggtacactc
cagtttttggggaaaattcaggattttcgattctattcagacacattatctaacagagag
gtacaagaaatttactcaggaacattaccacaagtccgcattcagtctgcctgccggtgc
ccaggatcaaggcctcgtgttaagccacaggacacacgctactgcttgcccaatggtgtg
cctgataatgtaggaactgtaactctgagggtgtcttctgcttaccagcctgtggagtat
gccaatgacaacaacaccagcaccatgtgggtctccaatttccaggatgatgtcatacta
gaagtggacttaggggaccagtttgaggttttttatatggggatagtgttctacagtcct
ctgcctgaggctatggtggtggaaagattacttaaaggggaagtcacttggcaaacatgg
cagtattatgctgtgaactgtatttcatactttggcctgcaaaacaatggtcccttgcca
aatgctacctctgtaaattgtctgcagcttggctttgccagcttaccactgtcatattcc
aaaggtagcataactttgaatctgcttcctactgagccagtcccacgacctgggtcctcc
aactttttcaacaaccctttactccaacagtttgtccaagcatcaaaagttcgtgttcga
ttccgcaaccacacactaattaccaacataagacatgaatactacgctgtttttgatttt
tctgtgactggcaggtgtgactgcaatggacatgccagttcttgtaacacatccagcttt
ccatacaagtgtttctgtactgaagagagtcacacgcagggcgacaagtgtaatgaatgt
cagcccctctacaacaataaggcatttaagaggggaaatctacaacaatcctacaactgt
cagccttgtaactgctatggtcatgccacttcttgtatctacaatgccagccttgatgct
tttcctgaagtttggacagatggaggtggcggtgtgtgtatgaattgtcaggacaataca
gagggacgattttgtgaaaggtgcaaagatggtttcttcaggcctactggcaagagcctc
tctgataaagatatgtgctcaacatgttcctgcaatactaatgggactgtgaatgctact
agtctctgtgaaaaggatgggggcaactgcttgtgtaaggactatgtagatgggagagct
tgtgatagatgcaaaattggctactacagtctacaggctgtaaatccaagtggttgtact
gcttgtcagtgtgatgtcagaggaactgttaatggtgacccctcatgtaatgaaactact
ggcatatgcaactgcaaggacaatgtcagaggtagctttagctggacaacttccagtgtc
ttccatgcaactgtaatccatttggatctaaagagtctttattgtgacccaagtactggc
cagtgcttgtgtaagncagaatgtacaggccacaagtgtgatcaatgtgtggatcgcttc
tacaactttgatgccggctgtataccctgtgactgtattgatgcaggcaccgttaatggc
accttttgtaacagaatcacaggcaactgtacatgcaaagcaaacacagtcggcagaaac
tgcggtgcttgtcgccaaggtacatataattttggtgtctctgtagacctggggtgccag
gactgctcctgcaacacagcgggaaccatcagcggacagacacagtgcaatgtcagcact
ggtgcttgtatatgtaaagctaatgtacagggccttcagtgtaacacgtgtaaaaccaac
acatatgggctgagtactgatctagtagaagggtgcagagcatgtgactgtgatacaagt
ggcactgtcaaccagcagcaggcttgtgatcagaacacaggccagtgcctctgtgttagt
aatcgagaggggaatcgctgtgacacatgcaccactgggtactacaaaatagcaggaaca
atgggctgcttaccatgtaactgcaacccagatggcacacttccttataccaactgtgac
aaaaacacaggacagtgtgaatgccgtacaaaccttggtattggtgggcgtgactgctct
cagtgtatggagggattctacaattttgtatctggaaagtgtaccccttgtaactgcaat
acctttggcagcgtgaatgcaacatgtaatatgattactggaaactgtacctgcaagctc
tttacagaaggacgagattgtggctcatgccaagcagactctagcaacctgatggctggt
aacccatatggctgcagtaaagctccatctcagcagcctactccagtatacacccctctg
tcacccacagcgatgactttgacatggagacccccagattacccaaatggactgatttca
tcttatcagttgtatcgtaataacactaaaatctatgaaggaccagctaactcatataat
gacacagggttgcgcccatacactctttatgcatatcgagtggaggcaatcaacatccaa
ggatcagcatcgagtccaattgttattttcagaacaaaccctggtataccatcttcagac
atggttcttattgtgacagaaattgcagtcaccagtgccagatgtatgtggaatgaacct
tcccagctgaacggcccattgctgaggtacgagcttgtgtcctatgatcttgccaatcag
tctgtgagcaaggtagagtggtctggcttggcaagagaacagctgttgacatccctgcgg
ccctattttaggtacaacctgacagttagagcttgtacacaaggaggctgttctgagagt
gcaggtgttcagtttctaaccaagtcagcacctcctgctggcatgcaggctccactaata
attgctttgagcagttctgttcttcttataacatggcagccgcctctggcacctaatgga
ataattatattctatgagtttatcctggatccccctgccacaaattacactgccacaggc
ctgagcccgttcactgtgtatgagtttcaggtacttgcagaaaactcagctgggaaagct
gcaagtccttggacctcagggcggacacaggaagcaacaccactgcttatgtcagcccct
gttctgacaggacttagcagcacagtgatgagcattgtatggcgtgtgccagatgacagc
agtgctcgaggcaacataactgtctacagaatctaccagcagagataccgggaccttact
cttgatccctatggcccacctacctactggcagctcatcttagagctaccaggctcagtg
cattcctacaacgttagcgggcttacacatactcagaaaacacattcaaagtggaggcct
gtaacaatcaaggttgtgtcaacagcaccacttcttcaggccgcacacgttctgcagccc
ctgatggcatggagaaaccggtggttgatggctttaactctacagtga
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