Pomacea canaliculata (golden apple snail): 112561999
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Entry
112561999 CDS
T05881
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112561999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112561999
Spliceosome [BR:
pcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112561999
Complex C
U5 SnRNP specific factors
112561999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
DUF536
Motif
Other DBs
NCBI-GeneID:
112561999
NCBI-ProteinID:
XP_025090712
LinkDB
All DBs
Position
LG4:complement(29703769..29729402)
Genome browser
AA seq
2379 aa
AA seq
DB search
MAFPYTVIGPGGQQFIVGQIPLIQQTLAPQIVTTSVQVQVAAPQPMPPPPQPQPQPLPPP
QTQPKVPDYMSEEKLQEKARKWQQLQSKRYAEKRKFGFIDAQKEDMPPEHIRKIIRDHGD
MTNRKFRHDKRVYLGALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWV
IEPIYISQWGTMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNVMDVEPLEAIQMEH
DPEENKAVVEWYYDHKPLIDTKFVNGPTYRKWQLTLPIMSILYHLANPLLTDLVDDNYFY
LFDLKSFFTAKALNLAIPGGPKFEPLVKDRELQDEDWNEFNDINKIIIRQPVRTEYRIAF
PYLYNNMPFQVHLPWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRTAVKSSDPIIDDDE
DFELPEYVQPFLSDTPLYSDNTANGIALLWAPRPFNLRSGRTRRAIDVPLVKTWYREHCP
ANMPVKVRVSYQKLLKYYVLNALKHKPPKAQKKRYLFRSFKATKFFQTTQLDWVEVGLQV
CRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKL
IVDSHVQYRLGNIDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRF
NTGPVTKGPGCGFWAPGWRVWMFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQR
VESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIE
NMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLK
DGPYITAEEAVAIYTTMVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRL
NQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEK
ITDAYLDQYLWYEADKRRLFPPWIKPSDAEPPPLLTYKWCQGINNLQDVWDTSEGECNVM
MESTFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQF
ASFIVQFYGLVLDLLVLGLHRASEMAGPPQMPNDFLTFQDTVTEIAHPIRLYSRYIDRIH
IFFRFSAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDSRMRLMKHDVNLGRAVFWD
IKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTTHEEFTHKDGVWNL
QNEVTKERTAQCFLRVDEESMNRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFRE
AVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIP
QSDLRWSKQTDVGITHFRSGMSHDEDQLIPNLYRYVLPWESEFIDSQRVWAEYALKRQEA
NAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWT
HQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYK
KLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQI
FRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAYK
WSVSRASLLADSKDTMDGSTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYSTDNMSIYP
SPTGVLIAIDLAYNLHSAFGYWFPGAKPLIQQSMAKIMKANPALYVLRERIRKGLQLYSS
EPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQ
LFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHL
LDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRL
ILILRALHVNNDKTKILLKPDKTTVTEAHHIWPTLTDEEWMKIEVQLKDLILADYGKKNN
VNVASLTQSEIRDIILGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTKTVNKHGDEIIT
STTSNYETQTFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFII
ISDLRAQIAGYMYGVSPPDNPQVKEIRCIVMPPQWGTHQTVHLPSILPEHEYLKEMEPLG
WIHTQPNELPQLSPQDISTHARVMADNPSWDGEKTVVITCSFTPGSCSLTAYKLTPSGYE
WGRQNKDTGNNPKGYLPSHYERVQMLLSDRFLGFFMVPSQGSWNYNFMGVRHDPSMRYEL
VLSNPKEFYHEVHRPSHFLHFSATEEAQQMGADREDLYA
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atggcttttccatatacagtgattggtcctggtggacagcaatttatcgtgggtcaaatt
ccgctgatacaacagacactggcaccacagattgtaaccacatcagttcaggtgcaggta
gctgccccgcagccaatgccaccaccaccacagccgcagccgcagccattacctccacca
caaactcaaccaaaggttccagactacatgtctgaggaaaaactacaagaaaaagctcgc
aaatggcaacaacttcagtccaagcgttatgcagaaaaacggaagtttggttttattgat
gcacagaaagaagatatgccaccagagcacatacgaaagataattagagatcatggtgac
atgactaatcgaaaatttcggcatgataagcgtgtctaccttggtgctctgaagtacatg
ccccatgcagtgatgaagctgctggaaaacatgcccatgccttgggaacagattcgtgat
gttaaggttctctaccatatcactggggccatcacatttgtcaatgaaattccatgggtc
attgaacccatctacatatcacagtggggaacaatgtggataatgatgcgtcgagagaaa
agagatcgtcgccacttcaagcgtatgcgttttccaccttttgatgatgaagaacctccc
ttggattatgctgacaacgtcatggatgtggagccattggaggccattcagatggagcat
gaccctgaagaaaacaaggctgtagtggagtggtactatgaccacaagccactcattgac
acaaagtttgtcaacgggccaacatatcgcaagtggcagttgaccctgcctattatgtct
atcctataccatctggccaatccactgctcaccgatttggtggatgacaactacttttac
ctttttgacttgaagtccttcttcacagccaaagctcttaatctggccatcccaggaggc
cccaaatttgaacctttggttaaagacagggagctgcaggatgaggactggaacgagttc
aatgatataaacaagataatcatcaggcagccagtgcggacagagtaccgcattgctttt
ccctacctgtacaacaacatgcctttccaggtccacttaccatggtaccatactcccaat
gttgtcttcatcaagacagaagatcctgacttgcctgctttctactttgatcctctcatt
aaccctatctctcatcgaacagcagtgaagtcttcagatcccatcattgatgatgatgag
gacttcgagctgcctgagtatgtccaaccattcttaagtgacacacccctgtacagtgac
aacacagccaatggcatagcattgctctgggctccacggcccttcaaccttcggtctggg
cggacccgacgtgccattgatgtaccacttgtaaagacatggtatcgtgaacactgtccg
gccaacatgcctgtgaaagtgcgagtgtcttatcagaagcttctcaagtactatgtactg
aatgccctgaagcacaaacctcccaaagcgcaaaagaaaaggtacttgtttcgatccttc
aaggctacaaagttcttccaaacaacacagttggactgggtggaggtaggtctgcaggtg
tgccgacaaggttacaacatgctcaaccttctcatccatcgcaagaacctcaattatctt
catctggactacaatttcaatctcaagcctgtgaagacattgaccactaaagaacgcaaa
aagtcccggtttgggaatgcctttcacttatgccgtgaaattctgcgtttaacaaaactc
attgtggacagccacgttcagtaccgccttggcaacattgatgcctttcagttggcagac
ggactgcagtacatttttgcccatgttgggcagttgactggcatgtaccgctacaagtac
aagctaatgaggcaaatccgcatgtgcaaagacctcaagcacctgatctattaccgcttc
aacactggtccagttaccaaggggccggggtgtggattctgggcaccaggatggcgtgtc
tggatgttcttcatgcgaggcatcacaccgctcctggaacgctggcttggaaatcttctg
tcacgccagtttgagggccgtcattcaaagggcgtggccaaaactgttacaaagcagcgt
gttgaaagtcattttgatttggagctgcgagctgcagtcatgcatgacatactggacatg
atgccggagggtatcaagcagaacaaggccaggactattctgcagcatctctcagaagcc
tggaggtgctggaaagccaacattccctggaaggtaccaggtttgcccactcccattgag
aacatgatcctgcgttatgtgaaggccaaagctgactggtggaccaacactgctcactac
aaccgtgagcgaatccgcagaggtgctacggtggacaaaacagtctgcaagaaaaacttg
gggcgcctgacacgtctatacctgaaagctgaacaggagagacaacacaactacctgaag
gatggtccctacattacagcagaagaagctgtggccatttacacaacaatggtgcactgg
ctggaaagtcggcgcttctcccctattcccttcccaccgctgtcttacaagcatgacacc
aagctgctcattcttgctctggagcgactaaaagaggcttacagtgtgaaaagccgattg
aaccagtctcaacgagaagagctgggtctgattgaacaggcgtacgacaatcctcacgag
gcattgtccaggatcaagcgtcaccttttaacacaaagagcttttaaagaggtgggcatc
gagtttatggacctgtacagtcacttgatcccagtctatgatgtagagcccttggagaag
attacagatgcctacctggatcagtacctgtggtatgaggcagacaagcgccgtctcttc
ccaccatggatcaaaccatctgatgcagaacctcctccactacttacctacaaatggtgc
cagggcatcaacaacctgcaggatgtctgggacacttctgaaggagagtgcaatgtcatg
atggaatccacttttgaaaagatgtacgagaagattgacttgacgttgttaaacagactg
ttgcgtctgattgtggaccacaacattgctgactacatgacagctaagaataacgtagtc
attaattacaaggacatgaaccataccaactcctatggtatcatccgtggtctgcagttt
gcatcttttatagtgcagttctatggtctggttctggatcttttggtccttggcttgcat
cgtgctagtgaaatggcaggtccaccacaaatgcctaatgatttcttgactttccaggac
acagtcactgaaatagcccaccccatcagattgtattcacgctacatcgaccgtattcac
atattctttaggttcagtgcagaggaggcgcgtgacctgattcagcgataccttacagag
catcctgatcccaacaatgaaaacattgttggctacaacaacaagaagtgttggccccgt
gactcccgcatgcgtctcatgaagcatgacgtcaatcttggtcgagctgtgttctgggac
ataaagaatcgcctgccaagatctgtcaccaccattcagtgggagaacagctttgtctca
gtgtacagtaaggacaatcccaacctcttgttcaacatgtgtggctttgagtgccgcata
ctgcccaagtgtcgtactacacatgaagagttcacacacaaagatggagtctggaatctt
cagaatgaggtgactaaagaacgaactgcacagtgcttcttgcgagtggatgaagaatcg
atgaatcgtttccacaaccgtgtgcgccagatcctcatggcctcaggatcaacaaccttc
accaagattgtcaataagtggaacactgctctcattggactgatgacttacttccgagag
gctgttgtgaacacccaggaattactggacctccttgtcaagtgtgagaacaagattcag
acacgtatcaaaattggtctgaattccaaaatgccatccagatttcctcctgtggtcttc
tacactcccaaggagcttggcggactgggtatgttgtccatgggccatgtgctcatcccc
cagtcagacttgcggtggtctaagcaaacagatgttggtatcacccatttccgctctggt
atgagtcatgatgaagaccagctgatccccaacttgtacaggtacgtgctgccatgggaa
agtgagttcatcgattctcagagagtctgggctgagtatgctctcaagaggcaagaggca
aatgcacagaatagacgcttgacacttgaagatctcgaggacagttgggatcgtggaatt
cctcgtatcaacaccttgttccagaaagatcggcataccttggcatatgacaaaggctgg
cgtgtgcgaacagatttcaagcagtaccaggtcttgaagcagaatccattctggtggaca
caccagcgtcatgacggcaaactgtggaatctcaacaactaccgtacagacatgatccaa
gctcttggaggtgttgagggcattctggagcacactctgttcaagggcacatactttccc
acgtgggagggtctcttttgggagaaagccagtggttttgaggagtccatgaagtacaag
aagctgaccaacgcacagcggtcaggtctgaaccagattccaaaccgtcgctttaccctc
tggtggtcacccaccatcaacagagccaatgtgtacgttggtttccaagtgcagctggac
ctgacaggcattttcatgcatggcaagatccccacacttaagatctccctcattcaaatc
ttccgagcccatctgtggcagaagatccatgagagcgtcgtcatggatttgtgtcaggtg
tttgaccaggaactggatgcacttgagattgagacagtgcagaaagagaccattcaccct
cgcaagtcatacaaaatgaacagctcatgtgcagatattctcctctttgctgcctacaag
tggagcgtctcacgggcatcactcctggcagattccaaggatacaatggatggttcaact
acacagaaatactggattgatgtgcagctgcgatggggtgattatgattcacatgatgta
gagcggtatgctcgtgcaaagttcctggactacagtacagacaacatgagtatctatcca
tcccctacaggggttctgattgcaattgaccttgcatacaacttgcacagtgcatttggc
tattggttccctggtgccaagccccttatccagcagtccatggcaaaaatcatgaaggca
aatccagccttgtatgtgcttcgtgaacgcatccgcaagggtctgcagctgtactcgtct
gaacccactgagccttacctcagctctcagaactatggagagcttttctccaaccagatc
atctggtttgtggatgacaccaatgtgtaccgtgtgactattcacaagacctttgagggc
aatctgactactaaacctatcaatggtgccatcttcattttcaatccacgcactggtcaa
cttttcttaaagatcattcatacctctgtgtgggctggtcaaaagcgtcttggtcagctg
gccaagtggaagacagctgaagaagtggctgccctcatccgttcactgccagttgaagaa
cagcccaagcagatcattgttacacgcaaaggcatgcttgacccccttgaggtgcatctc
ttggactttccaaacatcgtcattaaaggcagtgaactgcagctgcctttccaggcatgt
ctgaaggtagagaagtttggagatcttatcctcaaggccactgaaccccagatggtcctt
ttcaacctctacgatgactggctgaaaaccatctcctcttacacagcgttctcgcgtctc
atcttgattcttcgagcactgcatgtaaacaatgacaagaccaaaatcttgctgaagcca
gacaagacaactgtcacagaggctcaccacatctggcccactctgactgatgaagagtgg
atgaagattgaagtgcagttgaaggacctcattttagctgattatggcaagaagaacaat
gttaacgtggcttccctgacacagtctgaaattagggacatcattctaggcatggaaatc
tcggcaccttcagcccagcgtcaacaaattgcagaaattgagaagcagacaaaagagcag
tcacagctgacagccacaaccacaaaaactgtcaacaaacatggtgatgagattatcaca
tcaactacaagcaattatgagacacagaccttctcctctaagacagagtggcgagtgcgt
gccatctctgccaccaacctgcacctgcgcaccaaccacatatatgtgtcatcagatgac
attaaagagacaggctacacctacattctacccaagaatgtcctgaaaaaattcatcatt
atctcagatttgagagcacagattgcagggtacatgtatggagtgagcccccctgacaac
cctcaagtgaaggagatcaggtgtattgtcatgccacctcagtggggcactcaccagact
gtgcatctgcccagcatcttgcctgagcacgagtatttgaaggagatggagcctcttggc
tggatccacacccaacccaatgagttgccacagttatctccccaggatatcagcactcat
gcgcgtgtcatggctgacaacccttcttgggatggagagaaaacagttgttatcacttgc
agcttcaccccaggttcttgctcactgactgcatataagttgacccccagtggttatgag
tggggccgtcagaacaaggacactggcaacaaccccaaaggttacctgccatctcattat
gagcgtgtacagatgctgctgtcagacagattcttgggctttttcatggtgccaagccaa
ggttcctggaactacaactttatgggtgtgcggcatgaccccagcatgaggtatgagctg
gtactgtctaatcccaaggagttctaccatgaagtacaccgcccatctcacttcttgcac
ttttctgctacagaagaagcacagcagatgggggctgaccgagaagatctttatgcgtag
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integrated database retrieval system
