Pomacea canaliculata (golden apple snail): 112562257
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Entry
112562257 CDS
T05881
Name
(RefSeq) Fanconi anemia group J protein homolog isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03440
Homologous recombination
pcan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112562257
03460 Fanconi anemia pathway
112562257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112562257
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
112562257
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
112562257
FA (Fanconi anemia) pathway
Downstream FA components
112562257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
ARCH_RTEL1
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
112562257
NCBI-ProteinID:
XP_025091153
LinkDB
All DBs
Position
LG4:complement(33929857..33945730)
Genome browser
AA seq
1240 aa
AA seq
DB search
MASHKEFKIAGLSVLFPCKPYPSQFSMMDKIIQSIERHQNCLLESPTGSGKTLALLCSTL
AWQAEEKKHQDICCCSCHCQKETSSHSDQVSEAIMNNSSSGKVAGNLTTLTMSEYKSGDC
TSSSVLCGTPSTSKENCIVINDDSDEEFRPLAKFRTPGKTKPFRKRDWKQISIEYEDDSP
ASTKSPVAAVKKPSVDPESTCSITRSEENAGSQSCSSCACTKGSNKVTPRRVPKIFFGTR
THKQVAQIVRELRKTAYHDVSMTILASREHTCINPQIASSVNKNEGCKDLLKDVGCRFKD
RVMKYQSQQAIKYLGLSTAWDLEDLVNLMKAKKACPYFLSRGLKDQADLIICPYNYLVDP
LIREGMEISLKGQIVLLDEAHNIEDSAREAASQSITQEQIQRALQDMDTLMDNGIRIADI
SKLRQMCFKLDSFISNNGSSLTHCDFDQSYRLWSGFDIIAQLQHVDLGPQNFQNLKSTLA
SIKAEETEERANPDGQQRALSSATAGLLEQLFLALHYLYTDNMKYAEDYRVSIVKNVRYA
AVDLDGSWLNSRKNHRGRRTQAVEVFTLNFWCMNPAVGFSDFSCCRTVILTSGTLSPVDS
FQSELGLPFPIVLEANHIIRDEQVWVGVIGQGPDGTSLQAVYRNMETFGFQDQLGQLILG
ICKAVPKGVLCFLPSYNALDKLTSRWKQTGIWEQFQHHKHVMSEPRGSDKVDFDQILRSF
YKTVSEDDTSSSCDGALFFAVCRGKVSEGMDFADNFARAVITVGIPYPNFKDVQVDLKRK
YNDRYQSSRRLLSGNLWYEIQAFRALNQALGRCIRHRCDWGALIIVDDRFVKNTQKYSSG
LSKWVRQKLKVHHSCDSMLVSLQQFTHARLEQELKDRMKDPSAVVDKSHINDSDSSLWGV
DSSATGVAQYAELGNEGPSAGGKPTSMLQVLSLNSTTVAPKSSWFVSTDGSQKQTVEAFG
VGVQTKLAQSWRSNTKVAVNDQLSAQAAAQSPKIPVIPGVKSSLSFTIPKMPEVPEGRVS
LSAVCSPMLFENSTSLTSPEKTDTSDLSLTVSLASAAAAVNQQEVVTSANTTADLKKTIA
TAATKCLTVKSAFESFEGIMTKHCRPLFLKKDTKIGLSNISNASCSSEVAVGTVCSPSET
SKQLLNTAGAVEAYVSKSSSSLAKTVNLNGVRPVSPMNTENIRVNSRSQVAKRRAGELQE
NVDSGGVVRRLKTRRRSSTIRILRNTQKDILDDITQVNVT
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcacaaagagtttaagattgcagggctgtctgtcctgtttccttgtaaacca
tacccatcccagttcagcatgatggacaagattatacaaagcattgagcgtcatcaaaac
tgtttgctggagagcccaacagggagtgggaaaacgttggctttgctgtgttccaccctt
gcctggcaagcagaggaaaaaaaacatcaagatatttgctgctgcagctgccactgtcag
aaagagaccagctcccattcagatcaagtttcagaagcaatcatgaacaatagcagctct
ggcaaagtagctggtaatctcacgactttgactatgtcagaatataaatctggggactgt
acatcatcatctgtgctttgtggcacaccttccaccagcaaagaaaactgcattgttatc
aatgatgactcagatgaagagtttcgtccccttgcaaaatttcgtaccccagggaaaacc
aagccgttcagaaagagagattggaaacagatcagcatagaatatgaagatgactcgcct
gcatccactaaaagtcctgtggctgctgtcaagaaaccatcagtagatccagaaagtaca
tgcagtataaccaggtctgaagaaaatgcaggctcacaaagctgctccagttgtgcctgt
accaaaggaagcaataaagtaacaccaagacgggttcccaaaattttttttggcactcga
acacataagcaagtggcacagattgtccgcgaactgcgaaaaacagcatatcatgatgtc
tcaatgacaattttagcaagccgagaacacacatgcatcaatccacagattgccagctct
gtcaacaaaaacgaaggttgtaaagatctactaaaggatgttggctgcaggtttaaggac
agggtgatgaagtaccagtcccagcaagccatcaaatacttagggctgtctacagcatgg
gatttggaagacttggtgaaccttatgaaagccaagaaggcttgtccttacttcttgtca
cggggactgaaggatcaagcggacctcatcatttgtccctacaattacctggtggaccct
ctcattagagaaggtatggaaattagtctgaaagggcagattgtgttgctggatgaggct
cacaacatcgaggattctgctagagaagctgccagtcagagcattacgcaagaacagatc
cagagggcgctgcaggacatggacacactcatggacaatggtatacgaatcgctgatatt
tccaaactacgccaaatgtgtttcaagcttgacagtttcatcagtaataatgggtcgtcc
ctaacacattgcgactttgaccaatcatatcgtttgtggagtgggtttgacatcattgct
cagctccagcacgtcgaccttggccctcagaatttccagaatctcaagagtacacttgca
tccattaaggccgaggaaacagaagaacgtgccaaccctgacggtcagcagcgtgctctg
agctcagccactgcaggcctcctggagcagttgtttcttgccctgcactacctgtacact
gacaacatgaaatatgcagaggactacagagtttccattgtcaaaaatgtgcgttatgct
gctgttgacttggatggctcttggctgaactccaggaagaaccacagaggaaggaggact
caagctgtggaagtcttcaccctcaacttctggtgcatgaaccctgctgtgggtttctca
gacttttcctgttgccgcactgtgatcctgactagtggcactctgtcaccagtggattcc
tttcagtcagagcttggcctgcctttccccatcgtgctggaggcaaaccacatcatccga
gatgaacaggtttgggttggagtgataggtcaaggtcctgatggcacatcactgcaggct
gtttaccgcaacatggagacctttggcttccaagaccagctgggtcagctgatattaggc
atctgtaaggctgtgccgaagggagtgctctgcttcttgccctcatacaatgcactagac
aagctgacaagccgctggaaacaaactggaatatgggaacaatttcagcatcataaacat
gtaatgagtgaacctcgtggttcagacaaagtggacttcgaccagattttgagaagtttc
tacaagactgtcagtgaagatgatacaagtagctcttgtgatggtgctctgttctttgcg
gtctgccgaggcaaagtcagtgaagggatggactttgctgacaactttgctcgagctgtg
attacggtgggaattccatatccaaactttaaagatgtccaggttgatttgaagcgcaaa
tacaatgatcggtatcagtcttcacgacgattgttgtcagggaatttgtggtatgaaatc
caggcttttcgagccctcaaccaggctttgggaagatgtatcagacacaggtgtgactgg
ggtgccctcattattgtggacgaccgttttgtgaagaacacacagaaatatagcagtggc
ttatcaaagtgggtgcggcaaaagcttaaggtacaccacagctgtgactctatgctggtg
tctttgcagcagttcacccatgctcgcttggagcaagagctaaaggacaggatgaaagat
ccatctgcagtagtggacaaatctcacatcaatgattcagattccagcttgtggggagtt
gacagttctgccactggagttgctcagtatgctgagttaggcaatgaaggcccttctgca
ggtggaaagcccacgtcgatgctacaagtcctgtcactgaattctactactgtcgcacca
aaaagttcatggtttgtatctacagatggtagccagaaacagacggtggaagcctttggc
gtgggcgtgcaaaccaaactggcccagtcttggaggagtaatactaaggttgcagtaaat
gaccaactctcagcacaagctgctgctcagtctcccaagataccagttattccaggagtg
aagtcttctttgagtttcaccatacccaagatgccagaagtgcctgaagggagagtttct
ttgagtgcggtgtgttctccaatgttatttgaaaattcaacatcattaacatcgcctgaa
aagacagacacgagtgatctttccttgactgtgtcactagcctctgcagcagcagcagtg
aaccagcaggaagtggtcacatctgcaaacaccactgctgatttgaagaaaactattgca
acagctgcgaccaagtgcttgactgtaaaatcagcttttgaatcatttgaaggcataatg
acaaaacattgccgtcctctatttcttaaaaaagacacaaaaatcgggctttctaatata
tctaatgccagttgttccagtgaagtagcagtaggcaccgtgtgcagtccatcagaaact
tcaaaacagttgctaaatacagctggagctgtagaagcctatgtgtcaaagtcgtcatct
tcgcttgcaaaaactgtaaatttgaatggtgtacgaccagtgtctcccatgaacactgag
aacatcagggtgaacagcagatcacaggttgctaaaaggagagctggagagcttcaggag
aacgttgacagtggtggggtggtacgcagactaaagacgcgcagacgcagttccaccata
agaatattgcgaaacactcaaaaagacattctagatgacattacacaagtaaatgttaca
tag
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integrated database retrieval system
