Pomacea canaliculata (golden apple snail): 112562354
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Entry
112562354 CDS
T05881
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan00100
Steroid biosynthesis
pcan01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
112562354
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pcan01006
]
112562354
Enzymes [BR:
pcan01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
112562354
Prenyltransferases [BR:
pcan01006
]
Terpene biosynthesis
Squalene/phytoene synthase
112562354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
112562354
NCBI-ProteinID:
XP_025091368
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Position
LG4:20364292..20372218
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AA seq
415 aa
AA seq
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MDFLKALTHPDEVYALIRFKFGGCEAVMPKNDQVSMSATLKRCYNYLTETSRSFSAVIQA
LDGELRDAICIFYLVLRALDTVEDDMTIDNKLKIPMLKNFYKNLQDPQWHFTESKEKDRI
VLEDFPAITREFHELAGVYHEVISDICCKMGHGMTVFLDRDIDTIEEWNEYCHYVAGLVG
IGLSRLFSASGLEDPCVGKDTALANNMGLFLQKTNIIRDYLEDILQGRKFWPKAVWSKYV
EQLTDLALEKNRTQAVHCLNELITNALELVPDCITYMSRIHNQSVFNFCAIPQVMAIATL
ERCYNNPAVFTGVVKIRKGEAVKMMMGSTSLEKVKAIMYHFTSEIYRRIPENDPNAERTR
QVCMKALASSQTTQEYTTSSIYPPLYVSCAMMLWAIAYNYWSQISAFYNDFFGED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggattttcttaaagcattgacacatccagacgaagtatatgcactcattcgattcaaa
tttggaggctgtgaggctgttatgcccaagaatgatcaggtatctatgagtgccacgttg
aagaggtgctacaattacctcacggaaaccagccggagtttttcagcagtcattcaggca
ctagatggagaacttcgggatgccatatgcattttttatctggtattgcgtgcccttgac
actgtggaagatgatatgacaattgacaacaaattgaagataccaatgctgaagaatttc
tacaaaaatctgcaggaccctcagtggcattttactgaaagcaaggaaaaggatcgcatt
gtcttggaagactttccagccatcacaagagaattccatgaactggctggtgtttaccat
gaagtcatttcagatatatgctgtaaaatgggacatggcatgactgtctttcttgacaga
gatattgacacaatagaagaatggaatgagtattgccactatgtagcaggtctggtggga
attggattgtctcgcttgttttcggcatctggactagaggatccatgtgtgggaaaagac
acagcgctggccaacaacatgggattatttcttcagaaaacaaatatcattcgggattat
ttggaggacatcttgcaaggacggaaattctggcccaaagctgtgtggagtaaatatgtt
gagcagctgacagacttagctttggaaaagaacagaacccaagctgtgcattgtctgaat
gaactgatcacaaatgcattggaacttgtaccagattgcatcacatacatgtctcgcatc
cataaccagtctgtctttaacttctgtgccataccacaggtaatggcaatagctacatta
gaaagatgctacaacaacccagcagtcttcactggtgttgtgaagatccgtaagggagag
gcagttaagatgatgatgggttccaccagcctagagaaagtcaaagcaattatgtatcat
tttacttcagagatatacagaagaatacctgaaaatgatccaaatgctgagcggacaagg
caggtgtgcatgaaggcattggccagctcacagacaacgcaggagtacacaacctcaagc
atttatcctcctctctatgtctcttgtgctatgatgctgtgggccattgcctacaattac
tggtcacagatttctgcattttacaatgatttctttggagaagactaa
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