Pomacea canaliculata (golden apple snail): 112562803
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Entry
112562803 CDS
T05881
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112562803
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112562803
03036 Chromosome and associated proteins [BR:
pcan03036
]
112562803
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112562803
Coactivators
SAGA/TFTC/STAGA complex
112562803
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112562803
STAGA complex
112562803
TFTC complex
112562803
SAGA complex
112562803
SLIK complex
112562803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
TFIID_NTD2
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
WDR54
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_Nup120_160
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR19_1st
PEP5_VPS11_N
Cytochrom_D1
Mala_s_1-like
Motif
Other DBs
NCBI-GeneID:
112562803
NCBI-ProteinID:
XP_025092096
LinkDB
All DBs
Position
LG4:23519381..23531768
Genome browser
AA seq
603 aa
AA seq
DB search
MKRAKSEQIRSAVITYLKRRQYQESEIHVLTRKEGKKDLTTELEDMSVKKQIRLNAGTEN
SVACSSISGDFVSCDQQFARLRKHILESADNESKELSSLLYPLFVHIYVDLLSSGYKPSA
HKFHERHNEIFHSEEQKDFIRCLRKLESRAELLVAKDVMDFREHRFCVSLSQESVKCLLN
YLKAGDNMIILQIINQNIKIQVIKDGTQSLELQRSNSPASSAYECPDGRDKEKEDEADPS
AMSVEDAELLKSLRETICRVRALPPNLPSVCFYTFINAYQGLCTSNVSPDARLICGGFED
SSIQLWRLQPEPLASQSTESCNSNITLAADFIYKDEDERKVKIDLESQEAVTLRAHSGPV
YKTAFSPDSRYILSCSRDATVRLWDLTTRSNVAIYQGHSGCVWDVDFCEVTGHFATSSHD
QTVKLWSMDRIYPLRSFVGHTYDVDCVAVHPNGNYVASGSGDRSVRLWSIQDGKCVRLFS
GHRGSILGLAFSPNGQLLASAGEDRRVHIWDLGSGALLKDLRGHSDTVHSLAFSRCNAMV
ASGGMDCYIRIWDVRRGNEPTSPQLVEGHTSAELLGAFPTKSATVSFLRFARHNLLLAAG
AIQ
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgctaaaagtgaacagattcggagcgctgtgatcacttacttgaaacgccga
cagtatcaggagtcagaaatccatgtccttaccagaaaagagggaaagaaagacctgacg
acagagctggaagacatgtccgtgaaaaagcagatacgtctgaacgcaggcaccgagaac
agtgtggcatgtagcagcatatctggtgattttgtatcatgcgatcagcagtttgcaagg
ctaaggaaacacattctagagagtgctgacaatgagagtaaagaactgtcatccctactg
taccctttgtttgttcacatctacgttgacttactgtcttcaggctacaaaccttctgct
cataaattccatgagcgacataatgagatcttccacagtgaagagcagaaagatttcatt
cgttgtttaagaaagctagagtcaagagcagagcttttggttgcaaaagatgtcatggat
tttagagaacacagattttgtgtctccctatctcaagaatcagtgaaatgtcttctaaat
tatttaaaggctggtgataatatgatcatcctgcagattatcaatcaaaacatcaaaatc
caagtgataaaagatggaacccagtcactggagctacagaggtcaaattctccagcttct
tcagcctatgaatgtccagatggcagagacaaggaaaaggaagatgaagctgaccccagt
gccatgtcagttgaggatgctgaactgttaaaatcactcagagagaccatatgtagagtt
cgtgcccttcctcccaacttaccatctgtttgtttctacaccttcatcaatgcctaccaa
ggtctgtgcacttccaatgtatcaccagatgcacgccttatttgtggaggttttgaagat
tcttccatccagctctggcgcttacagcctgaacccttagcctcccaatctacagagagc
tgtaacagcaatattacacttgctgcagacttcatctataaagatgaggatgagcgcaaa
gtgaagatagacctggagtcacaggaagcagtgacattgagagcccatagtgggcctgtg
tacaaaacagcgtttagcccagactccaggtatatactgtcttgttccagggatgctaca
gtgcgactgtgggacttgactacacgcagcaacgttgctatctaccagggccatagtgga
tgtgtctgggatgtagatttctgtgaagtcacgggacactttgccacatcttctcatgat
caaacagtgaagttatggtccatggaccgcatatatcctctgcgatcatttgttggccac
acatatgatgtggattgtgtagcagtccatcccaacggaaactatgtagcttcagggtcc
ggtgatcgatctgtacggttgtggagtattcaggatggaaaatgcgtgcgcttgttctct
ggccaccggggatcaattcttggcttggcattctcacccaatggtcagcttttagcttca
gcaggggaagatagacgggtccacatttgggaccttggttctggtgccttgctgaaggat
ctgcgaggccacagtgacactgtccactcgctggcattcagcaggtgcaatgccatggta
gcctctggtgggatggactgctacattcgaatctgggatgtacgccgaggaaatgaaccc
actagcccacagctagttgagggccacacctcagcagaactgcttggtgctttcccaaca
aagtcagctactgtgtctttcttgaggtttgctcgtcacaaccttctgttagctgctggt
gctattcagtga
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integrated database retrieval system
