Pomacea canaliculata (golden apple snail): 112562843
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Entry
112562843 CDS
T05881
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112562843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112562843
Spliceosome [BR:
pcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
112562843
Complex C
U5 SnRNP specific factors
112562843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
PRP1_N
TPR_19
HAT_PRP39_N
HAT_PRP39_C
TPR_16
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_17
TPR_2
FAT
NatA_aux_su
ARM_TT21_2nd
TPR_1
TPR_11
TPR_9
TPR_21
ARM_TT21
ARM_TT21_5th
TPR_15
ChAPs
LPD22
Motif
Other DBs
NCBI-GeneID:
112562843
NCBI-ProteinID:
XP_025092174
LinkDB
All DBs
Position
LG4:complement(12766924..12780090)
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AA seq
931 aa
AA seq
DB search
MSVQSLVSRRKKTFIGLPAPLGYVPGLGRGATGFTTRSDIGPARDADDIPEDRHAPPNKK
AKQKEEEDDEDLNDANYDEFSGYGGSLCSKDPYDKDDEEADAIYEAIDKRMDEKRKERRE
EKLKRDIEKFRQERPKIQQQFSDLKRDLASVSVDDWNNLPEVGDARNRKQRVGRAEKFTP
VPDSVLARAAASGSVNSAVSEQEQKFGGLTTPFGSITPIGSATPMGDIDMKKIGQARNTL
MDIKLTQVSDSVSGQTVVDPKGYLTDLQSMLPSHGGDINDVKKARLLLKSVRETNPKHPP
AWIASARLEEVTGKLQAARNLIMKGCEECPKSEDMWLEAARLMPGDQAKAVVAQAVRHLP
QSVRIWIKAANLETEIKAQKRVFHKALEQIPNSVRLWKAAVELEDEEDALIMLSRAVECC
PTSVELWLALARLENYENARKVLNRARENIPTDRQIWITAAKLEEAHGNIPMVDKIIDRA
LTSLRMNMVEINREQWIKDAEDCERSGSLHTCQAIIRAVISIGVEEEDKKHTWMADADAC
AAHGAYECARAVYAYALTVFPSKKSIWLRAAHFEKNHGTRESLESLLQRAVAHCPKAEVL
WLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEFERARRLLHKARN
SAPTARVFMKSVKLEWCLGEVDNALMLLDEAVKHYPDFPKLSMMRGQIEEQRGNLDTARN
AYNQGLKKCPTSWPLWLLLSRLEERAGQLTRARSILEKARLKNPKTPELWMEAVRVENRA
GLKNIAMTLMAKALQECPNSGILWAEAIFMEPRPQRKTKSVDALRKCEHDPHVLLAASKL
FWSERKLSKARDWFNRTVKIDPDLGDAWAAFYKFETLHGDQKSADDIATRCVAAEPHHGE
HWCRVSKAIPNWRLKTQEILPLVAAAMSVPT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcagtctttggtcagcaggagaaagaagaccttcataggtcttccagctcca
ctaggttatgttcctggtcttggaagaggagccacaggcttcaccacacggtcagatatt
ggacctgccagagatgctgatgatataccggaagatcgtcatgcaccaccaaacaagaaa
gcaaaacagaaagaagaggaagatgatgaagatttgaatgatgcaaactatgacgagttt
tctggctacggtggcagcctttgcagcaaggatccctatgacaaagatgatgaggaagca
gatgctatctatgaggccattgataaacgaatggatgagaaacgcaaggaacgacgtgaa
gaaaagctgaaaagggatatcgaaaagttccgtcaggaacgccccaaaatccaacagcag
ttctcagatttaaagcgagacctggccagcgtcagtgttgatgattggaacaatctccca
gaagttggagatgctcgtaatcgcaaacaacgtgttggccgtgcagaaaagttcactcca
gtcccagatagtgtgctagcacgtgctgctgcatctggcagtgtcaattctgctgtgtca
gaacaagagcagaaatttggagggttaactacgccatttgggtcaatcactcctattggt
tcagctacacctatgggagatatcgatatgaagaaaattggacaggctagaaacacgctg
atggacatcaaacttacacaggtgtcagattcagtcagtggccagaccgtggttgaccct
aagggctacctcactgacttgcaatctatgctgccctcacatgggggagatatcaatgat
gttaaaaaagcacgtctactactgaaatctgttcgtgagacaaaccctaaacatcctcca
gcctggattgcctcagcacgattagaagaggtgacaggaaagctgcaggcagctcgtaat
ctgatcatgaaagggtgtgaggagtgtcccaagtccgaggacatgtggctggaggctgct
cgacttatgccaggggaccaggctaaagcagtggttgcacaggctgtcaggcatttgcca
caatctgttcgtatctggatcaaagctgcaaacctagaaacagaaatcaaagcacagaag
cgagtttttcacaaagctctggagcagataccaaactctgtcagactttggaaggctgct
gtagaactggaggatgaggaggatgctcttattatgctgagtcgtgctgtggagtgttgt
cccactagcgttgagctgtggcttgccttggctaggcttgagaattatgagaacgcccgc
aaagttcttaacagggcacgagagaacattcctactgataggcaaatttggattactgca
gcaaaactggaagaggcacatggtaacattcccatggtggacaaaattattgacagagct
ctaacgtcactgagaatgaacatggtggaaatcaatcgtgagcagtggatcaaggatgcg
gaggactgtgagcgcagtggcagccttcatacttgtcaggcaatcatccgagctgtcatc
agcattggggtggaagaggaagacaaaaagcacacatggatggcagatgcagatgcttgc
gcagcacatggggcatatgagtgtgcccgtgctgtctacgcctatgccctcactgttttc
cccagcaagaagagcatctggttacgagcagcacactttgaaaagaaccacggtacaagg
gagtctcttgagtccttactgcagcgagcagttgctcattgtcctaaagctgaggtgctg
tggctgatgggtgcaaagtccaaatggttggctggtgatgttcctgcagcccgaagcatc
cttgcacttgcattccaggctaatccaaacagtgaggagatctggctggctgccgtcaag
ctggaaagtgagaacaatgagtttgagcgtgcgcgaagactattgcacaaagctcgtaat
tctgcacccactgcaagggttttcatgaagtcagtaaagctggaatggtgcctaggcgag
gtggacaatgccctgatgttgctagatgaagccgtcaaacattacccagacttcccgaag
ttgtctatgatgcgtggtcagattgaggaacagcgtggaaacctggatacagcacggaat
gcttacaatcaggggctgaagaagtgtcctacatcgtggcctttgtggctacttttgagt
cgtcttgaggagcgtgctggacagctgacacgagcacgatcaatccttgagaaagctcgt
ctaaaaaacccaaagacaccagagttgtggatggaagctgtgcgtgtggagaatcgagct
ggtttgaaaaacatagctatgacactcatggcaaaagcattacaggagtgcccaaattca
ggtatactgtgggctgaagctatcttcatggaacctagaccacagcgtaagacaaagtca
gtcgatgctcttcgcaagtgtgagcatgatccacatgttctcttggcggcatccaaactc
ttctggtcagaacgaaagcttagcaaagcacgagactggttcaaccgcacagtcaagatt
gaccctgaccttggtgatgcctgggcagcattttacaagtttgaaacactccatggtgac
caaaaaagtgctgatgacattgctacacgatgtgtggcagcagagcctcaccatggggag
cattggtgccgagtgtccaaggccatccccaactggcgcctcaaaacccaggagattcta
cctcttgtagctgctgccatgtctgtgcccacatag
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