Pomacea canaliculata (golden apple snail): 112562918
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Entry
112562918 CDS
T05881
Name
(RefSeq) Bloom syndrome protein homolog isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03440
Homologous recombination
pcan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112562918
03460 Fanconi anemia pathway
112562918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcan03032
]
112562918
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112562918
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
112562918
DNA replication proteins [BR:
pcan03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
112562918
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
112562918
Bloom's syndrome complex (BTR)
112562918
FA (Fanconi anemia) pathway
112562918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
112562918
NCBI-ProteinID:
XP_025092316
LinkDB
All DBs
Position
LG1:complement(8387145..8397635)
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AA seq
1159 aa
AA seq
DB search
MSRQAAGSVVPQASGPVGTMFHQSQALSPSPPDITKLPCSRFVQRSESSRVDVTKHPLLT
TDVFQMTKEHHSDLQQLLLQATDEVCEIICTASTAALMNLGVSDYTRLQALLAIRKQIKD
RQSLITLSATCGSPDNGAHSFLQNCHSNILPVKDAENVNASKVMTHTSPSVSKSVVKKIP
VTRLQPVTASPVPCGDSFFEDADKFTQSHTSYLQDTRPIALISAGDPVPTNVSKDRESFS
GSITSFSGSQFQQTKNCTVSVRQNSDSSPIVINDDSNNALRDVCVDSFRFDYDISVASHK
SNAKQNERRADWSTDSNCTSFESIVDGFEENGDDFDMADIKEWDKQAGESDADTLKSTSL
DTTNTEADPYIPMFGSSDKDDGATGEFDGENFPHSKELRKVFHTVFGLREFRHNQLQAIN
AALLGHDCFILMPTGGGKSLCYQLPGLVARGVSVIVSPLRALIQDQVQRLIAFDIPAAHL
SGEMDTGQANTVYSQLYQRDPGVKLLYVTPEKLSASDKLLSSLESLFRRQMLNRFVIDEA
HCVSQWGHDFRPDYKKLNVLRTKFPGVPVMALTATATPRVRRDIIHQLAMKEPKWFMQSF
NRPNLKYSVKPKKPSNATADVTEMIKSNFKHDCGIIYCLSRKECDTVAEQLKKSGIEAES
YHAGLSDSERNRVQDRWLNGDKCQVICATIAFGMGIDKADVRFVIHYSLPKSVEGYYQEA
GRAGRDGMLAHCILLYTYSDVRRLRSMIERDQCATYESKRVHINNLFRMVHYCENVADCR
RSQVLHYFGEHHFDREHCNVVPGALCDNCKSKDLFIVRDVTEDAKEIVKCVRELTSGRRS
DYTLLHFVEIFKGSQNTRIMDLGHNKLALHGRGTAYSRGDAERLLHRLVIEEILAEELRT
TAADTTACYIMLGSKAADLMHDKIKVQMAVQGGRKQNKMCRIGQEPQTSRQQLIDNCYKE
LVILAKTIASEHGSKNYALIFPNAMLWQLAEKTPLTVEEMKKEIDGMPETKINKYGAHRF
LDITTKFCIMVSTLPNEDLKDNDAELHKTEDWASPYFSAPSTSVTPRRGYGRGKRGRPKP
RKKNSHGGVKRKGGSSVGTRGRGQRGHSSFRGSFTSSSESRGSAKSGPSRGGGVTKSTLG
MMPDPRSRPYLASVGSYMG
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcaagcagctggtagtgttgtaccacaagcttcaggtcctgttgggactatg
tttcatcagagccaggctctttcaccatcacctcctgatataaccaagctaccttgttca
agatttgttcaacgaagtgagagtagtagagtggatgttacaaagcatccattgctgaca
acagatgtttttcagatgaccaaggagcaccatagtgacctgcaacaactgttactgcag
gctactgatgaggtgtgtgagattatctgcacggccagcactgctgcattaatgaatctt
ggtgtcagtgactacactcgtctgcaagccctgctagctatcagaaaacaaatcaaggac
aggcaaagcttgatcacattatcagctacctgtggatcacccgacaacggtgcacattcc
tttctacaaaactgccactcaaacatcttaccagtgaaagatgctgagaatgttaatgcc
agtaaggtcatgacccacacatctccttcagtctctaagtctgttgtgaaaaaaattcct
gtcaccagactccagcctgtgactgcctcaccagtcccctgtggagacagcttctttgaa
gacgctgacaagttcacccagtcacacacaagctacttacaagacactcgtcccatagct
ctcatttctgctggcgatcctgtcccaacaaatgtttccaaggacagagagtcgttttca
ggctcaatcacttcattttcaggttctcagtttcaacagacaaaaaattgcactgtgagc
gttagacagaattctgacagctcacctattgtcatcaacgatgatagcaataatgccttg
agagatgtttgtgttgatagtttcaggtttgactatgatatatcagtagcttctcataag
tccaatgcaaaacagaatgagagacgtgctgattggagcacagattctaactgtacatca
tttgaaagtattgtagatggttttgaagaaaatggcgatgattttgacatggcagatata
aaagagtgggataaacaggctggtgaaagtgatgctgatactttgaaatcaacttcattg
gacaccaccaatacagaagcagatccatacatcccgatgtttggatcatcagacaaggat
gatggagcaacaggtgagtttgatggagagaactttcctcacagcaaggagctacgaaaa
gtgtttcacactgtttttggattacgagagtttcgccacaaccagctacaagccatcaat
gcagctctgctgggtcatgactgtttcattcttatgcccacaggtggagggaagagtttg
tgttaccagcttccaggactggtcgctcgaggagtttcagtcattgtgtcacctctacga
gcactgatacaagatcaggttcagcgtcttattgcctttgatattcctgctgcccacttg
tcaggggagatggacacaggtcaagcaaacacagtgtactctcaactgtaccaaagagat
cctggtgttaagctactttatgtaacaccagaaaaactttcagctagtgacaagcttctc
agcagcctggaatcgttgttcagacgtcagatgctgaatcgatttgttatagatgaggct
cactgtgttagtcagtggggtcatgactttcgccctgactacaagaaactaaatgtcctt
cgaaccaaatttcctggtgttcctgtcatggcactgacagcaacagccacaccaagagtg
agacgtgatatcattcaccagctagccatgaaagaacctaagtggtttatgcagagtttc
aatcgtcccaacctgaagtattcggtgaaacccaagaaaccttccaatgcaactgcagat
gtcactgaaatgataaaatccaactttaaacatgactgtggcatcatctactgtctttca
aggaaagaatgtgatacagtagcagaacagttgaaaaagtcaggtattgaggcagagtcc
tatcatgcaggactgtctgactctgaaagaaatcgtgttcaagaccgttggctaaatggt
gacaagtgtcaggttatctgtgccaccattgcttttggcatgggcattgacaaggctgat
gtgcgttttgtgattcattactctctgcccaaatctgtggaaggatattaccaggaagca
gggcgtgctggaagagatggcatgctggcccactgtatactcctgtacacatacagtgat
gtcagacgcctgcgtagcatgattgaaagagatcagtgtgccacatatgaatcgaaaaga
gtgcacatcaacaacttgtttcgcatggtccactactgtgagaatgtggcagactgtcga
agatctcaagttcttcattattttggagaacaccatttcgaccgtgaacactgtaatgtg
gttcctggtgccctctgtgataactgcaagtcaaaggatcttttcattgttcgagatgtt
actgaagatgccaaagagattgtcaagtgtgttcgagagttgacctctggtcgaagaagt
gattacactcttctacattttgtggagatatttaaaggttcacaaaacacgcgcattatg
gatctgggtcacaataagctggcacttcatggccgtggcacagcctacagtcgaggtgac
gcagagcgtttgctgcaccgtcttgtgattgaagagatcctagcagaggaattgagaact
actgctgcagacacaacagcctgttatattatgcttggttcaaaggcagctgacctaatg
cacgataaaatcaaggttcagatggctgtgcagggtggccgcaagcaaaacaagatgtgt
cgcattggccaggagccccagaccagtcggcagcaactgatagacaactgctacaaggag
ctcgtgattctggcaaagaccattgcctctgagcatggaagcaagaattatgccttgatt
ttccccaacgctatgctgtggcaacttgctgagaagacccctctgactgtggaggagatg
aagaaggagattgatggaatgccagagaccaagatcaacaaatatggtgcccataggttt
ttggacattactaccaagttctgcattatggtttcaaccttgcccaatgaagatctgaaa
gacaacgatgcagaacttcacaagacagaggactgggcatccccttatttttctgcccca
agcacaagtgtcactccaagaagaggatatggaagaggaaagcgtgggcggcctaaaccc
aggaaaaagaactcacacggtggagtgaaaagaaagggtggaagcagtgttggcacaaga
ggaagaggtcagcgaggtcattcttctttcagaggaagtttcacatcgagttcagagagc
agaggatcagccaaatcaggaccatctcgaggaggcggagtaaccaaatcaaccttggga
atgatgcctgaccctcgttccagaccctatcttgcctcagttggttcttatatgggatag
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integrated database retrieval system
