Pomacea canaliculata (golden apple snail): 112562944
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Entry
112562944 CDS
T05881
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcan03036
]
112562944
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
112562944
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
112562944
NCBI-ProteinID:
XP_025092354
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All DBs
Position
LG4:complement(11936318..11952820)
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AA seq
1080 aa
AA seq
DB search
MFYAHFVLSKRGPLARIWLAAHWDKKLTKAHVFETNIDSSVEAILKPKVKMALRTSGHLM
LGVVRIYSRKAKYLLADCNEAFVKIKMAFRPGVVDLPEENREAAVAAITLQENFHDFETA
LADLEDIDVQAQFSVNQSRPEEITMREDLGSIPLMGDDGFDNLEEEDSLGGEVNDEEFTL
IIHGFKTDFISHPLDFAQILDTVESTLQNRCSCQGSWINIVISHKPTESPVICNQSHIVH
PHHKNIRCDSAENYTRSPSPFCDKLGSPLTDIPFKAKRTCLCCASVNDKTRSKWHFTAAN
GSSPNLNINSNKIPPSSSVHTSGISPITSRPSCSVLGVGQSPASPSINEHEPSSYLTEQT
IKAGLMVISPVSKRWSTDDPLSNAVLLRRTSAMSAASSGYGSDFQRLHSVSSDKDCSCCS
NCEMDASPTSTIALGHRDGLNVCHSTDAFRSPDSFLSRDVSFERSSSSMKSQTCQAARRL
FAASPPSTICKSRAESYKWQPETIEPHKAIVSSLDSSLGLGSDPGYNDFDAESGISEDMG
SNDETSDLDFCPPTGTGNPKGDVGFDEREILRDTSHLEDPLYKNPEVTSAVHMDDRDKTL
TNDSRTEKSMNINLEPPVEGDGYEDGVGGFIGGGADDDGDDSDGNFGDVDQDFFGQDFME
TGGLFEDTPMPEVPISHDNGEEGPAVGKSDEHAKGSSGGAADAEETVPLQAAASASSISA
EQTTLVHNEEEAFALEPLDVTAVPGGIEKKGKRKRKLIVDEQKGIPSETMKLQLSDTTDI
VTTLDLAPPTKKLMHWKETGGVEKLFALSGRPIVSKSTTWLFTKNLVTKPVLDDLELGEE
HQLDLSAPLPEITREEEKTADQTRHSEMSTIIEEPSSVVETTTTSTTRTRRSERSFADKS
FPAKSPRHSTAPEPVPHLEPEPVVSHHDLFAQIPDVIVDMPADPTTIEPSIDPNLEEGPP
SVAPFSVPPPSNAPPSVAPASVPPAFEDLEDLEAMPENEEQDEKRLNKRTQHMQHVLRSA
FNYSRNLSFKDLTRNLNRKQVASRFYTLLVLKKHQAACVQQTEPFGDIIITEGPHFGQVC
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgttttatgcacactttgtgcttagtaaaagagggcccctggcccggatatggctggct
gcacattgggacaagaaattgaccaaggctcatgtctttgagaccaacatagacagcagt
gtggaagctatattgaagccaaaggtgaagatggcacttcgcacttcaggtcatcttatg
cttggtgttgtgagaatctactcacgcaaagcaaaatacttgctagcagattgcaatgag
gcctttgtaaaaataaaaatggcttttcggccaggtgtggttgatctaccagaagaaaac
cgagaagctgcagttgctgccatcactcttcaggaaaactttcatgattttgagactgct
cttgcagaccttgaggacattgatgttcaagctcagttttctgtcaaccaaagtcgtcct
gaggagattacaatgcgagaagacctaggttccatccctcttatgggagatgatggattt
gataatctggaagaagaggacagcttaggtggtgaagtcaacgatgaagagttcacactt
ataatccatgggttcaaaactgacttcataagccacccattagattttgcccaaatatta
gacactgttgaaagcactctccagaacaggtgcagttgccaggggtcatggataaacatt
gttattagccataagcccacagaatctccagtcatatgtaaccaatcccatattgtacat
ccccaccataaaaatatacgatgtgacagtgctgagaattatacaaggtccccatcccct
ttttgtgataaactcggttctccattaacagacataccatttaaagccaaaaggacttgt
ttatgttgtgcttcagtaaatgataaaacaagaagcaaatggcattttacagcagcaaat
ggcagctcaccgaacttaaatatcaatagtaacaaaatacctccaagttcttcagtacat
acctcagggatttcacctattaccagcagacctagttgcagtgtgttgggtgttggacag
tcaccggcctcaccatccattaacgagcatgaaccttccagttatctcactgagcaaact
ataaaagctgggttaatggtcatttctcctgtctcaaaaagatggagcacagatgaccca
ttaagcaatgcagtgttgttaagaagaactagtgctatgtctgcggccagctctggttat
ggcagtgattttcaaagactacattcagtctcttcagacaaagactgcagttgttgttcg
aactgtgaaatggatgcaagtccaacttccactattgcactaggacatagagatggcttg
aatgtttgccattccacagatgcatttcgcagccctgattcgtttttatctcgagatgtt
tcttttgaaagaagtagtagtagtatgaagtctcagacatgtcaagcagcacgtagatta
ttcgcagcaagcccgccgtccacaatctgcaaatcacgagctgagagttataagtggcaa
ccagagaccattgagccacacaaggccattgtcagcagtctggacagcagtcttggcctt
ggtagtgatccaggttacaacgactttgatgctgagtcagggatctctgaggacatgggt
tccaatgatgagacaagtgaccttgacttttgtccgccgactggcactggcaacccaaag
ggagatgtagggtttgatgaacgagaaatattgcgagatacctcccatcttgaggatcct
ctctacaagaatcctgaagtgaccagtgctgttcatatggatgatcgcgacaaaacccta
acaaatgactcgcgcactgaaaagtccatgaacatcaatcttgaacctcctgtagaggga
gatggttatgaagatggtgttggtggctttattggtggtggggctgatgatgatggtgat
gacagtgatggaaattttggagatgttgatcaagatttctttgggcaagatttcatggag
acaggtggattgtttgaagatacaccaatgccagaggtaccaatatcccatgataacgga
gaggaaggtccagcagtgggaaaatctgatgagcatgcaaaaggatcatctggaggagca
gctgatgctgaggagacagtacctcttcaggcagcagccagtgcctctagcatttctgct
gagcagaccactttggtacataacgaagaagaagcttttgcacttgagccattagacgtc
acggctgttccaggtggtatagagaaaaaaggcaagcgaaagcgtaaacttattgttgat
gagcagaagggtattccaagtgaaacgatgaagcttcagctgtctgacaccacagacatt
gtcaccaccttagatcttgctccacccacaaagaaactaatgcattggaaggaaactggt
ggtgtggaaaagctgtttgctttgtcaggcagacccatagtctccaaatcaacaacctgg
ctgttcaccaagaacctagttactaagcctgtgcttgatgaccttgagcttggtgaggaa
caccagttagatttgtctgcaccacttccagagatcacacgagaagaggagaaaacagca
gaccagacccgtcattcagagatgagtacaataattgaagaaccatccagtgtggttgaa
acgacaaccacaagcaccacccgtacccgcagaagtgagagatcctttgcagataaatct
ttccccgcaaagtctccacgacattcaacggcacctgaacctgtgcctcatcttgaaccc
gaacctgtagtttcacatcacgacctgtttgcacagatccctgatgtcattgttgacatg
ccagccgatcccacaacaatagagccatcgatagatccaaacctggaggagggtcctccc
tctgtggcaccgttctccgttccaccaccgtccaatgctcccccatctgtggccccagca
tctgttccacctgcatttgaagatcttgaagacctggaagccatgccagagaatgaggag
caggatgagaagcgcctcaacaagcgcacacaacatatgcagcatgttctgagatctgca
ttcaactactccaggaacctttctttcaaggacttgacacgaaaccttaaccgcaagcaa
gtggcttctcgtttctacaccttgctggtcttaaagaaacatcaggctgcatgtgtacag
cagacagagccctttggggacattatcatcacagagggacctcactttggccaagtgtgc
taa
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