Pomacea canaliculata (golden apple snail): 112563960
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Entry
112563960 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: integrin alpha-4-like
KO
K06585
integrin alpha 9
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan04512
ECM-receptor interaction
pcan04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112563960
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
112563960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcan04515
]
112563960
Cell adhesion molecules [BR:
pcan04515
]
Integrins
Integrin alpha subunits
112563960
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
IBV_3B
Motif
Other DBs
NCBI-GeneID:
112563960
NCBI-ProteinID:
XP_025094224
LinkDB
All DBs
Position
LG5:complement(10167865..10182640)
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AA seq
1152 aa
AA seq
DB search
MPAINDRYTSAVSLMLCFIMCCSGFNIDIESAVVHYGPNNTLFGYRAEFLKHANGYTSLL
VSAPHFKPKKVNSSGVYFLCDPLQQICTSQTTVPSTDKKYINVSTFGEEEEMYGLTVLMV
NKSTALVCGPLWSTSLDGRVAHRFAVGRCQLIPPGKSSWSPMTKDVSKYIGSFEIEGRLD
CRDLKGLSLFGFSASHDGEENIVIGTPGYMGGKGSFGILTLGSGEFDMKETDLFDDEVDV
YLGFAVANGNFCGEVKICFAVSNKMPDGKVYIVAREQHAVFRKVQLLLGPQSYSSFGFSL
CAMDINGDGLSDLLVGAPTYSDDSTDPNRMTAVQSSSICSCGNLVKNVNLDGGRKSFARF
GSAIGNIGDINQDSIQDVAVGAPQEDEGRGAVYIYLGSSKGPETTFSQRISGRDIGKGLF
SFGSHISQPTSDISAYKYPDFIVGSPESNSLVVLRTRLIINARLNILTTASHINISSNPC
LVKTKVDSFKTSGCMKLSLCLNYSSSFTSYPYENLPFDLTFQVDSLMTYDPYRRVRLYRG
QGDSPLTMVKETVSVNVQKGYCMSFDAILMEVKKQNKTGRDHQNPFLPVKIEGNFTLNMT
TLRGIVKPILNSSLPTSTSAELRFLTKCGEDQKCRPDLVLSGNVLHVPSEESLNLNVVNI
TSEVVLNLSVTNKQETAYGIRLIVSIQGEIQFRAADGDSGSHFICESKDNSEKSDDQRSF
SNLFELATLESRGSIVRETSVRGSLSSTGGQLSRDTFNVTAEPYDMVHNPDEDMSDNRII
LNSEKAIIADLQIFGENGRLIKKINTQWQIISIVLNEEEQNPWKWCFGICLEVLRDFDLI
QNLVEMAPRPLAICMSTTPPTRIYRPPTRCLVTNNGPSFMPATHVNISLPYMDMEGRELV
TSHKVMIKQPDGTIEQCLDVSLSNSAVVMTTHSSQAPSSSPSPQTSQKSNILLPQTTGSP
GSEFVPLEIEPSRRRRRQAGNEMQDIFVNSTEDRDSTLRMDCDSYMCQIFQCSLPVLPRH
AQAEINISIVFNSKLLPFSSKILNILYLSDSKVAEPSTPFFHRWTEPRSKNVDTVLRQVM
SSHREINIWIIIGGVIGGLAALAIITVILRRLGFFRRADKLKLQRLKRESGYYDNRRRPP
LNLTEQTAVEGK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccatcaatgaccggtacacgtctgcggtgtcactgatgttgtgtttcatcatg
tgttgctccggttttaacattgacatcgagtccgcagtcgtccattatggacctaacaac
accttgtttggataccgtgctgagttcctcaaacacgccaatggttatacaagcttgctg
gtgtcggctccgcactttaaacctaagaaggtgaattcatcaggagtttactttttgtgt
gatcccctgcaacagatttgtaccagccagacgaccgtcccatctacggataaaaaatac
attaatgtgagcacatttggagaggaagaagaaatgtatggcctgacagtgttaatggtc
aacaaatccactgctttggtgtgtggaccgctgtggagcacctcattggatggaagagta
gctcatcgttttgcagtggggcggtgccagctgattccacccgggaagtcttcttggtct
cccatgacgaaggatgtctcgaagtacattggatcattcgagatagaggggaggttggat
tgcagggacttgaaaggtctgtcgctgtttggcttctccgcaagtcatgatggggaagaa
aacattgtcatcggtactccaggatatatgggcggaaaagggtcttttggaatccttaca
ctgggaagtggagaattcgatatgaaggaaactgatttgtttgacgatgaagttgatgtt
tacttaggttttgctgttgccaatggaaatttctgtggcgaagtgaaaatttgttttgca
gtttcaaacaaaatgcccgatggaaaggtctacattgtggccagagaacaacatgcagtc
ttccgtaaagttcagctattgttaggtccacagagctactcctccttcgggttcagcctg
tgcgccatggacatcaatggcgacggtctgtctgacctgctggtgggagccccgacctac
tcggatgacagcaccgacccgaatcgtatgactgcggtacagtcctcgtctatctgcagc
tgcggtaaccttgtaaagaatgttaacctggatggtggcagaaaaagcttcgctcgtttc
ggatcagctataggaaatattggcgacatcaatcaggactcgatacaagatgtggctgtc
ggcgccccacaagaagatgaaggaaggggagcagtgtacatatacctggggagttcaaaa
ggaccggaaacgaccttctcacaacggatctctgggcgagatattgggaaaggattgttc
tctttcgggtctcacatatcgcagcccacttcagacataagcgcttataaatatccagac
tttatagtcggaagtcctgaaagcaactccctggtagttctccgcacccgactgatcatc
aatgcaagactgaatatcctcacaacagctagccatataaacatctccagcaacccctgt
ctcgtcaaaaccaaagtggatagcttcaagaccagtggatgtatgaaactaagtttatgc
ctaaactactcctccagcttcacaagttatccatatgaaaatcttccctttgacctgacg
tttcaagtcgattctctgatgacctatgacccgtataggcgagtacggctgtacagaggt
caaggggactccccattgacgatggttaaggaaactgtgtccgtcaacgtgcagaaaggt
tactgcatgtcattcgatgccatactcatggaggtaaaaaaacaaaacaaaactggacga
gatcaccagaatccttttttacccgtgaaaatagaaggaaattttactctaaatatgaca
accttgcgtggaattgtgaaacccattttgaactcatctcttccaaccagcacatcggct
gagctgcgatttctgaccaagtgtggcgaggatcagaaatgcagaccggacttggttttg
tcgggaaacgtgctccacgtgccttcagaagaaagtctgaatctgaatgttgtcaacatc
acgagtgaagtggtgttaaacctctctgtcaccaacaaacaggaaacagcttacgggatc
aggctgatagtcagcatacaaggagagattcaatttcgagctgcagatggtgatagcggt
tcacattttatttgtgaaagcaaagacaactcagaaaagagtgatgatcagaggtccttt
agtaacttgtttgaactggctacgcttgaatcaagggggagcattgtccgtgaaacttct
gttcgaggcagcctcagttccactggaggccagctctcccgtgataccttcaatgttaca
gccgagccctacgacatggttcataatccagatgaagatatgagtgacaataggatcatt
ttaaactccgaaaaggctatcattgcggacctacaaatatttggtgagaatggaagacta
ataaagaagattaatactcaatggcagataatctccatagtactgaacgaggaagaacag
aatccgtggaagtggtgctttggcatctgtttggaggttctacgagactttgaccttatt
caaaatcttgtggagatggctcctcgacccctcgctatctgtatgtctacgactccgccc
acacggatctacaggccgcccacacgctgcttggtaaccaataacggcccgagtttcatg
cccgctactcacgtgaacataagccttccatatatggacatggagggcagggaacttgtg
acgtcacacaaagtgatgataaaacaaccagatggaaccatagagcagtgtcttgatgtc
agcttatcaaactcagctgtggtaatgacaacacactcgtctcaagcaccatcatcatca
ccatcaccacagacatcccagaaatcaaacattcttctgcctcagaccacaggcagcccg
gggtcggagttcgtgcccctcgaaatagagccatcacgtcgccgccgtcgtcaagctggg
aacgagatgcaggacatcttcgtgaactcgactgaagacagagacagcacactgcgaatg
gactgtgacagctacatgtgtcagatattccagtgcagccttcctgtactcccgagacat
gcacaggctgagattaatatctccattgttttcaacagcaaactcttgcctttctccagt
aagatccttaatatcttgtacctgtctgacagcaaagtggcggaaccatcaacaccattc
ttccaccgatggacagaaccgcgatcgaaaaatgttgataccgtccttcgtcaagtgatg
tcttcacacagagagatcaatatctggattattattggcggagtcatcggcggtcttgca
gcgctcgccattatcaccgtcattcttagacgactgggcttcttcagacgtgctgacaaa
ctgaagctgcagagactgaagagagaaagcggttactatgacaacagacgacggcctcca
ctcaatcttacagagcaaacggcagttgaggggaaatga
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