Pomacea canaliculata (golden apple snail): 112564076
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Entry
112564076 CDS
T05881
Name
(RefSeq) exosome complex component CSL4-like
KO
K07573
exosome complex component CSL4
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112564076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112564076
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112564076
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
112564076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
112564076
NCBI-ProteinID:
XP_025094441
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All DBs
Position
LG5:complement(15380184..15383126)
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AA seq
196 aa
AA seq
DB search
MSASSICIPGQRIARQSEDTVGGHGTYTRHGFLYSTLAGYLKETRLSDGKKQISVVSDIH
HTVVPSESAIVTAKVTSVTPRFCKCVIMSVGKTPLKEYFRGMIRKEDVRATEKDKVEMYK
CFRPGDLVVARVLSIGDAQSYLLSTAENELGVVSATSEAGAIMVPVSWCKMQCPKTLAEE
FRKVAKVQPQYIEYNV
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtccagcatttgtattccaggccagagaattgcaagacagagcgaagataca
gtgggagggcatggcacatataccaggcatggttttctgtattcaactctggctggatat
cttaaggagacacgcttatctgatggaaagaagcagatttcagtcgtttcagacattcac
catacagttgtcccttcagaaagtgccattgtcacagccaaagtgacaagtgttacacca
cgcttttgtaaatgtgtcatcatgtctgtaggaaaaactcctcttaaagaatacttcaga
ggaatgataagaaaggaagatgtcagggctacagaaaaagacaaggtagagatgtataaa
tgtttcaggccaggtgatcttgttgtggctagagttctttccattggagatgcgcagtct
taccttttatcaacagcagagaatgaactgggtgttgtctcagcaacaagtgaagcagga
gctataatggttccagtcagctggtgcaagatgcagtgcccaaaaacattggcagaggag
tttcgcaaggtggctaaagtccaaccacagtacattgaatacaatgtctag
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