KEGG   Pomacea canaliculata (golden apple snail): 112564095
Entry
112564095         CDS       T05881                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
pcan  Pomacea canaliculata (golden apple snail)
Pathway
pcan03013  Nucleocytoplasmic transport
pcan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112564095
  09122 Translation
   03013 Nucleocytoplasmic transport
    112564095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcan03019]
    112564095
   03041 Spliceosome [BR:pcan03041]
    112564095
Messenger RNA biogenesis [BR:pcan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     112564095
Spliceosome [BR:pcan03041]
 Complex C
  Other components
   EJC/TREX
    112564095
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    112564095
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR19_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_Vps41 WD40_MABP1-WDR62_2nd eIF2A Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_NOL10_N Beta-prop_EML WD40_RFWD3 Beta-prop_WDR35_TULP_N Tricorn_2nd Beta-prop_WDR36-Utp21_1st DSE1_N RMC1_N NBCH_WD40 Beta-prop_TEP1_C CFAP251_N WDR90_beta-prop_4th WD40_MABP1-WDR62_1st PAC11 PD40 B-prop_COPA_B_2nd Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_ELP1_1st TRM82_WD Beta-prop_DCAF12 Cytochrom_D1 Beta-prop_WDR75_2nd WD_LRWD1 PROPPIN CNH VID27
Other DBs
NCBI-GeneID: 112564095
NCBI-ProteinID: XP_025094481
LinkDB
Position
LG5:complement(28721571..28725890)
AA seq 320 aa
MATSYLEQMQKHFQTNGRTRDIQIHSAKVHSVAWSCDGRRLASGSFDKTVTIYTVERERL
SKEHIFRGHGDSVDQLCWHPNNPDHLATASGDKTVRIWDSRTNKAAAVINTKGENINICW
SPDGSTIAVGNKEDLVTFIDARTHRSRAEEQFKFEVNEISWNNDGDLFFLTSGHGSIHIL
SYPELKLQHVLNAHPANCICIEFDPTGHYFATGSADALVSLWDLYDLVCVRTFARLDWPV
RTLSFSYDGKMLASASEDLVIDIAEVETGEKIHEIPCDTPTFTVAWHPKRHLLAYACDDC
SDRDRDRDSGVVHVFGFNDS
NT seq 963 nt   +upstreamnt  +downstreamnt
atggcgacgtcctatcttgagcaaatgcagaaacattttcaaacaaacggcagaactcga
gacatacagatccacagtgctaaagttcactcggttgcatggagctgtgatggtagaaga
ctagcatcaggttcatttgataaaactgttaccatatacacagtggaaagggaacgattg
agcaaagaacacatatttcgtggacatggagatagtgtagatcaactctgttggcatcca
aataatccagaccacttagctacggccagcggagacaaaactgtacggatatgggattct
cgtacaaacaaagcagcagcagtcatcaacacaaaaggggagaatatcaacatttgctgg
tctccagatggcagcactattgctgtaggtaacaaagaagatcttgtaacttttattgat
gctcgtactcatcgatcacgagcagaagagcaattcaagtttgaggtaaatgagatctca
tggaataatgatggtgatttgttcttccttacatctggacatggcagtatccatattctc
agctatccagaactcaagcttcaacatgttttgaacgcacaccctgcaaactgtatttgc
attgagtttgatccaactggtcattattttgctacaggaagtgctgatgccctggtcagc
ttgtgggatttgtatgacttagtttgtgtcagaacatttgctaggttggattggccagtc
aggacactcagcttcagttatgatggtaaaatgctggcatcagcatcagaagacctggtg
attgacatagctgaagtggaaacgggagaaaaaattcacgaaattccatgcgacacaccc
acatttactgtggcatggcatcccaaacgacatctgctggcatatgcatgtgatgattgc
agtgaccgagacagagatcgtgattctggagttgttcacgtgtttggattcaacgattct
tga

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