Pomacea canaliculata (golden apple snail): 112564109
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Entry
112564109 CDS
T05881
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1-like
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pcan04054
]
112564109
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112564109
Pattern recognition receptors [BR:
pcan04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
112564109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RIG-I_C-RD
ResIII
RIG-I_C
CARD_2
AAA_19
AAA_22
Yippee-Mis18
Motif
Other DBs
NCBI-GeneID:
112564109
NCBI-ProteinID:
XP_025094498
LinkDB
All DBs
Position
LG5:23256178..23266439
Genome browser
AA seq
964 aa
AA seq
DB search
MENELLSNLQACRRFLVPSDIISDLLTMFQESERQLIREKVLQTEESNRVEAVNRLIGEV
LVHGEDGFNLLLNALRGDEDELPEWWNRALEPSESSQLEVTKEGQWTVLMDAFEGQVIRK
LSEGELKAVMLKLNTKKVLKRTDVQQVRLRLSRDGKEKATQFMITCLRRSGDNWAWKLFL
VLVQVKPDLVRKMDPAGGHSEEDENENTTGDEPDEDGGRGPGDSNDDDDDDAGDSGSSAS
SSTADLSEDDSCHFSDDDDEKKDRDTEKNKRMKRNGEGESGHPKDLCLRHYQLELAAYAL
QGHNTIICAPTGSGKTRVAVYIVRQHLQRVVSDGRQPKIAFLARTVPLVTQQHKNFEKYL
PNCKTICITGESDHSMHLHNLLPSYDIVVMTPKVLENHLKPEKIESLAAFSLLIFDECHH
TRKGEPYNSLMKSYLKSKKEEQKNLPQIIGLTASIGVEKATTASEAVESILNIMGNMDVT
CISTVKENKKELEDTVPKPEGREDDEISNKIKDIMEVLQNMLVDRGADLEKKEVDDLLMK
APYNKASQQYGQWAVAIRNEVRLLNMSTRDHNTKKGREEDMKRQLARDVQVLADALVAYN
EALEVHDLTRPQDVLQHLQHKIEKKMSKDETTECEKQVYDLYKGALGETLIKHLSNTDEE
SDEMSDEKSRIIIFVRTRATCKALCEWLNSNPEHVLRRLKAMPFTGTAAHQDRGGMTQSD
QEAAIEKFRSGAVRVLVTTSVGEEGIDIPECNLVIKYNHVGNEVTTIQTRGRSRKRGGRA
ILMAQPRILMQEALNQRKAVMMYQAIERVDAMSAEDVVESVQRVQRKILEKDEIQSIVKK
SIAQTLRRETFSLQCCHCHDLTVAGENLRTINGSHHIILDKAIMKQVKIRPKQPKKFDDM
VFSGQVSCKKCKNHLGQILNYEGIDFIIVGIRSWTLLDKDNTAMIYRRWRDVPYYIPELT
TQGN
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgaactcctgagcaacttgcaggcatgtcgccgttttctggtgcctagcgac
atcatctccgatcttctgaccatgtttcaagaaagcgagagacagttaattcgagaaaag
gttttgcagacggaagaaagtaatagagtggaggcagtgaacagactcataggagaagtt
ctggttcatggtgaggatggcttcaatttgctgctgaatgcactcagaggggacgaggac
gagcttcctgagtggtggaacagagctctcgaaccgtctgaaagctcccagttggaagtt
accaaggaagggcaatggactgtactcatggacgcctttgaagggcaggtgatccgcaag
ctttccgagggcgaactcaaagctgttatgctgaagcttaataccaaaaaggtgctcaaa
cgaaccgacgtgcaacaagttcgtctaaggctaagtcgtgatggcaaggagaaggcgact
cagtttatgatcacgtgtttaagacgtagtggcgacaactgggcctggaagctttttctt
gtcttggtgcaagtgaaaccagatctcgtccggaaaatggaccccgccggcggacattct
gaagaggatgaaaacgaaaacacgactggtgacgagccggacgaggacggaggccgggga
cctggagacagtaatgatgatgatgatgatgatgcaggagattctggctcatccgcgtcc
tcttctacagctgatctaagtgaagacgactcctgccatttttcggacgatgacgatgaa
aaaaaggatagagatacagagaaaaataaacggatgaagcgaaacggagagggtgagtcc
ggccaccccaaggacctttgtctgagacattatcagttagaactggctgcttacgccctg
caaggacacaacaccatcatctgcgcgcccaccggctccggcaagacacgtgtggccgtg
tacattgtgcgccagcacctgcaacgtgttgtgtcagatggaagacagccaaagattgct
ttcttggccaggactgtgccactggttacccagcaacacaaaaactttgaaaagtatctt
cctaattgtaagacgatttgcattacgggggagagcgaccacagcatgcacctgcacaac
ctcctgcccagctacgacatcgtggtgatgacgcccaaggtcctggagaatcatctgaag
ccagaaaaaatcgagtctctggcggctttcagcctcctgatctttgacgagtgccaccac
acacggaaaggtgaaccatacaactccctcatgaagagttacctcaagtctaagaaggaa
gagcagaaaaacttaccacagatcattggcctcaccgcttcaattggcgtggaaaaggca
acgactgcatccgaggcggtggagagtatcctaaacatcatgggtaatatggacgtcact
tgtatctccaccgtcaaggaaaacaagaaggagttggaggatacggttcctaagccagaa
ggaagagaagatgacgagatcagcaacaaaattaaggacatcatggaggtcctgcaaaac
atgctcgtagatcgtggagctgatctggaaaagaaagaggtcgatgatctcttgatgaag
gctccttacaacaaagcaagtcagcagtatggccagtgggcagtcgcaattcgaaacgag
gttcgcctactgaacatgtccacccgcgaccacaacaccaaaaagggcagggaggaagac
atgaagagacaactcgcaagagacgttcaggtgctggccgatgctctggtggcttataac
gaagccctggaggttcatgacctcacgagaccacaggacgttcttcaacatcttcagcat
aaaattgagaagaagatgtccaaagacgagacaactgagtgtgaaaaacaagtatacgac
ctttacaaaggagcactgggagaaacactgatcaagcatctcagcaataccgacgaggaa
agcgatgaaatgagcgacgaaaagtctcgcatcatcatctttgtgcgtacgcgcgccacg
tgcaaagcgctgtgtgaatggctgaactctaaccccgagcacgtgctgcgacggctcaaa
gccatgcccttcacgggaacggcggctcaccaggacagaggaggtatgacgcagagcgac
caggaggcggccatcgagaagttccgcagcggtgccgttcgagtgctcgtcacgacctct
gttggcgaggagggcatcgacatcccagagtgtaacctggttatcaagtacaaccacgtg
ggcaacgaggtcaccactattcagaccagagggcgaagccgaaagcgtggaggacgggcc
atcttgatggcacagcccaggatcctaatgcaggaggcgctcaatcagagaaaggcagtc
atgatgtaccaggctattgagcgcgtggatgcaatgtcagccgaggacgttgttgaatcc
gttcagagggtgcagaggaagattctagagaaggacgaaatacaaagcatcgtgaagaag
agcatcgctcagacgctgcggagggagacgttttccctgcagtgctgccactgccatgat
ctgaccgtagccggggagaatcttcgtaccatcaatggctcccaccacattatccttgac
aaagccatcatgaagcaagtgaagatccgccccaaacagcccaagaaatttgacgacatg
gtgttcagcgggcaggtgtcgtgcaagaagtgcaagaaccacctgggccagatcctgaac
tatgaagggatcgacttcataatcgttggaatcagaagctggacattgctggacaaggac
aatacagctatgatatacaggcgctggcgggacgtgccatattatattccggagctcacc
acccaaggaaattaa
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