Pomacea canaliculata (golden apple snail): 112564254
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Entry
112564254 CDS
T05881
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112564254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112564254
03036 Chromosome and associated proteins [BR:
pcan03036
]
112564254
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112564254
Coactivators
SAGA/TFTC/STAGA complex
112564254
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
112564254
STAGA complex
112564254
TFTC complex
112564254
SAGA complex
112564254
SLIK complex
112564254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD_LRWD1
WD40_like
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_WDR35_TULP_N
eIF2A
PEP5_VPS11_N
Beta-prop_DCAF12
Cytochrom_D1
LisH_TPL
LisH
Motif
Other DBs
NCBI-GeneID:
112564254
NCBI-ProteinID:
XP_025094736
LinkDB
All DBs
Position
LG1:607061..618736
Genome browser
AA seq
676 aa
AA seq
DB search
MAESGHMTNKMKHATVVMGDKSDHNEKQTLLAVLQFLREHNLQETEAILKKEAKLSEEDI
QTEKSQPSSVVSHALAAYKSTDDPSIYEDVYTDLKQFIESCLDVHRVELNTILYPVFVHM
YLELIYNRHEWHAGQFFEKFYQDHEDYRQADLARLGAVKRREHMENNAMLQEFKTSQFVI
HMSRDSYTHLKRHLQGRHLILLTNLIHEHLFIHVFDGIPRTQEQILATSGALQGEAEKEA
NKAKVYYGLLKEPDLNIPLEEEEEGGEGDGGDPANKSKKRKAKKDALLMKKAKNDPNAPP
QTRIPLPELRDQDKIEKINIYREAMKRVKLSADNLPSICLYTLLNSSQGVSGIDFTDDSS
MVAAGFEDGNIRVWTLTPNKLRCMKPSSELEYIDKEADDVLERMMDDRTGTDTKMLTGHS
GVVFAVSFSPDRTSLLSASEDGTIRLWNLHTWSTIVCYKGHMFPVCDVKFAPCGHYFVSG
GKDRTARLWSTDHYQPLRMFVGHLCDVECVLFHPNCNYVATGSSDRTVRLWDVLNGSCVR
IMTGHKESVHCLTFSPDGRYLASGGADQTVILWDLSNGTAVAHLRGHTSTVYSLCFSREG
SILASGGIDDSVRLWDAAKVLEEQDTDNDTNVPSTLHVNTSPDLLLGTYFTKSTPVLGLH
FTRRNLLLVSGPFLPS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagcggacatatgacaaacaaaatgaaacatgccactgttgttatgggggat
aaatcagaccacaacgaaaaacaaacacttttggctgttctgcagtttcttcgggaacat
aatctgcaggaaacagaggctattctgaagaaagaggctaagcttagcgaagaagacata
cagacagaaaaatcacagccttcttctgttgtctctcatgcactggctgcctacaaaagt
acagatgaccctagcatatacgaggatgtatatactgatttaaaacagttcattgagtcc
tgcctggatgttcaccgggtggagctgaataccatcctgtatccagtatttgtccatatg
tatctggagctgatctataataggcatgagtggcatgctggtcagttctttgagaaattt
taccaggatcatgaagattaccgacaagcagaccttgcccgacttggggcagttaaacgt
cgtgagcacatggaaaacaatgccatgcttcaagaattcaaaactagtcagtttgttatc
cacatgtcccgagactcgtatacccacttgaagcggcatctgcaggggagacatttgatc
ttgctgactaatcttattcatgaacatctgttcatccatgtgtttgatggtattccacgc
acacaggaacagattctggctacttcgggagctctgcagggagaggcagaaaaagaggca
aacaaagcaaaagtgtattacggcttgctgaaggagccggacctcaacattccactggag
gaagaggaggaggggggtgagggagatggtggagacccagccaacaagtcaaagaaaagg
aaagcaaagaaagatgctttgttgatgaagaaagccaagaatgatcccaacgctccacca
cagaccagaataccactgccagagctacgagaccaagacaagatagaaaagattaatatt
tatcgagaggccatgaagcgtgtaaaactaagtgcagacaatctcccatctatttgcctc
tataccctccttaattccagccagggtgtgtcaggcatagactttacagatgattccagt
atggtggctgcaggttttgaagatggaaacattcgagtctggactttgacaccaaacaaa
ctgcgctgtatgaagccatcatcagaactagagtacattgacaaggaggcagatgatgtt
ctggaacgcatgatggacgacaggacaggaacagacaccaagatgctgacaggtcactct
ggagttgtctttgctgtctccttcagtcctgacaggaccagcctcctgtcagcatcagaa
gatggaacaattcgtctctggaatctccacacttggagcaccattgtttgctacaaagga
cacatgtttcctgtctgtgatgttaaatttgcgccttgtggtcactattttgtttctgga
ggcaaagatcggactgctagactttggtccacagatcactaccagccactgcgaatgttt
gttggacatctttgcgatgtggagtgtgtgctgttccatcctaactgcaactatgtagca
actgggtctagcgaccgcactgtacgactgtgggatgtgctgaatggcagctgtgttcgt
atcatgactggacacaaggaatctgttcattgtttgaccttttcccctgatgggcggtat
ctggcatcaggaggtgcagatcagacagtgatactgtgggacttgtctaatggtaccgct
gttgctcatctgagaggtcacacatcaactgtctacagcctttgtttcagtcgtgaaggc
agcatacttgcttctggtggcatagatgactcagtgagactgtgggatgctgctaaagtg
ctagaggaacaagacacggacaatgacacgaatgtccccagcaccttgcatgtaaacaca
agccctgacttgctgcttggtacatacttcacaaagtctacaccagtgctgggtctacac
tttaccaggcggaatcttctgcttgtttctgggcccttcttgccatcctga
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