Pomacea canaliculata (golden apple snail): 112564381
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Entry
112564381 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112564381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112564381
03036 Chromosome and associated proteins [BR:
pcan03036
]
112564381
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
112564381
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
112564381
PBAF complex
112564381
GBAF(ncBAF) complex
112564381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
112564381
NCBI-ProteinID:
XP_025094934
LinkDB
All DBs
Position
LG5:20047959..20071572
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AA seq
542 aa
AA seq
DB search
MQPSPQRYPSPGPPIRPPYSQPGYGAGPRPSYPPPPGSMGMPPRMGMHTGMPPHHGFSSS
ATTPPPSTVSTGSNTGSGSKGSSSTKNKETSTMPRAGMSQGMPPPPSIQGGMDRKRPPPP
DLRVQAAQQMKAKKKKKIADKILTQRVRDLVPESQAYMDLLAFERKLDATIMRKRLDIQE
ALKRPMKQKRKLRIFISNTFFPPKEGEDGEESVPSWELRVEGRLLEDAATAKLSDANKVK
RKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDQNVKCTVLLMLDY
QPMQFKLDPRLARLLGIHTQTRPVIINALWQYIKTHKLQDPYEREFINCDRYLEQIFDCK
RMKFAEIPSKLHPLLMPPDPIVINHVITWRDKGIPWNKSLTSSVRLEGPDAKKTACYDID
VEVDDTLKQQMNSFLLSAQSQQEISSLDNKIHETVETINQLKTNREFFLSFARDPQEFMN
NWLISQTRDLKTMTDVVGNPEEERRADFFYQPWSQEAVCRYFYGKVQQRRMELEQALGLR
NT
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcagccttcacctcaacgatatccttcaccggggcccccaatccgtccaccttattca
caacctggatatggagcaggcccaagaccaagttacccaccaccaccaggttccatggga
atgccacctagaatgggtatgcacactggtatgccaccccatcatggcttcagctcttct
gccacaacccctcctccctcaactgtctcaactggcagcaacactggcagtggctcaaag
ggctcaagctccaccaagaacaaagaaacctccacaatgccacgtgcaggcatgtctcag
ggtatgccccctcctcccagcattcaaggaggtatggaccgcaaacggccaccaccacca
gatcttcgtgtgcaagctgctcagcagatgaaagcgaagaaaaagaagaaaattgcagac
aaaatcctaacccagagagtacgcgatctggtaccagagtcacaggcatacatggatctc
ctggcattcgaaagaaagttggatgctaccataatgcgcaaacgtcttgacattcaagag
gcactgaaacggccaatgaagcaaaagcgaaagttgaggatattcatctccaacacattc
tttcctccaaaagaaggagaggatggagaagaatctgttccttcatgggaactaagagta
gaagggcgtcttcttgaggatgcagcaacagccaagctgagtgatgccaataaagtcaag
cggaaattttcttccttctttaagagtcttgtgattgaactggacaaagatctttatgga
cctgataatcatttggtagagtggcacagaactccaaccactcaggagaccgatggattc
caggtgaagcgacctggggaccagaatgtcaaatgcactgtactcctaatgctggactat
cagccgatgcagttcaagctggacccacgtttggcacgtttgttgggtatacacactcag
acccgcccagttatcatcaatgccctttggcagtacattaagacacacaaattacaagat
ccttatgagagggagtttatcaactgtgaccgataccttgaacagatttttgactgcaag
cgaatgaagtttgctgaaatcccttctaaactgcaccctcttctgatgccaccagatccc
attgttatcaaccatgtgattacctggcgcgacaagggtattccatggaacaaaagtttg
acatcatctgtaaggctcgagggtcctgatgcaaagaagacagcttgctatgatatcgat
gttgaagtggatgatacactaaaacagcagatgaactccttcctgttgtcagctcaaagc
caacaggaaatcagttctttggacaacaagattcacgagactgtagaaaccatcaaccag
ctaaaaactaaccgtgagttcttcttaagctttgctcgtgatcctcaagaattcatgaac
aactggctcatctctcagactagagatctgaagaccatgaccgatgtggtgggtaaccct
gaagaagaacgcagggctgatttcttttaccaaccatggtcacaagaggctgtgtgtcgg
tatttctatggcaaggttcagcaacgcagaatggagctggaacaggctcttggattgcgc
aacacataa
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