Pomacea canaliculata (golden apple snail): 112564537
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Entry
112564537 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8-like
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112564537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112564537
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
112564537
Spliceosome [BR:
pcan03041
]
Complex C
Other components
Step II factors
112564537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
DEAD
GIPC1_GH2
AAA_22
WHD_HA2
AAA_19
nSTAND3
AAA_16
PhoH
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
112564537
NCBI-ProteinID:
XP_025095191
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All DBs
Position
LG5:complement(5706703..5720689)
Genome browser
AA seq
1265 aa
AA seq
DB search
MDEEELNKLEYLSLVSKVCTELENHLGINDKDLAEFVIHLAEENDTFEKFKKTLEEKDAQ
FSDSLIANLLRLIKKMKPKPKDSINERLSEPSWDEREKEEEEKKSKLEINKQLFPALAMA
NDPRIRMMLDSDDEEYHLTEITSGKENKGTEEKVQLPVIKGEDAQVADQMMDELEALLSS
AKQESQKKSHGHEKKSRRSRSRDRVKEKKKRHHSRSRSRSRRRSRSRSRSRNQDRKKRRH
SRSRSRDRDHKRDRDHKRDHERTRDSDRDKESRQKLRDREVQDGERLKKQEQYNDIPLEP
LVGHIYAGKVTTIMQFGCFVQLEGLRKRWEGLVHVSQLRREGRVTNVSDVVTRGQKVMVK
VLSFTGQKTSLSMKDVDQDSGEDLNPQLTRSIVGGEVKNDESDARNPDRPSTLPLVNAPE
VDDSGEVRTFKRISSPERWELKQMMAAKAIEITELPDFDDETGLLPKQDDSDEDIEVEIV
EEEPPFLSGHGRHWVDLSPVKIVKNPDGSLAQSAMMQSALQKERRELKQXQREAEAGAVP
AGINTNWIDPMPDADSRKLAANLRGIGMTPHELPEWKRHITGGPKASYGKREKKSILEQR
QSLPIFKLKEELLKAVHDNQILIVIGETGSGKTTQITQYLAESGYTTRGKIGCXQPRRVA
AMSVAKRVSEEFGCRLGQEVGYTIRFEDCTSPETKIKYMTDGMLLRECLIDPDLLQYSVV
MLDEAHERTIHTDVLFGLLKQAVKKRKELKLIVTSATLDAIKFSQYFFEAPIFTIPGRTY
PVEILYTKEAETDYLDASMITVMQIHLTEPPGDVLLFLTGQEEIDSACEILYERMKALGP
EVPDLIILPVYSALPSEMQTRIFEPAPPGSRKVIIATNIAETSLTIDGIYYVVDPGFVKQ
NVYNSKTGMDQLIVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTNVPEIQR
TNLASTVLSLKAMGINDLLSFDFMDAPPMQTLISAMEQLHALSALDDEGLLTRLGRRVNA
EFPLEPMLSKMLIMSVHLSCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGD
HLTLLSVYNSWKNNKFSSPWCYENFVQIRTLKRAQDVRKQMLGIMDRHKLDVVSSGKNTA
RVQKAICSGFFRNAAKKDPQEGYRTIVDSQVVYIHPSSALFNRQPDWVIYHELVMTTKEY
MREVTAIDPKWLVEFAPKFFKFSDPTRLSKQKSSRRLSHCYNKYEXPNAWRISRAFRKFH
TKVTF
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaagaactcaataaacttgagtatttgtcactagtatcgaaagtatgtaca
gaactggaaaaccacttgggaattaacgataaagatctggctgagtttgtgatccattta
gcagaggaaaatgatacctttgagaaattcaagaaaacgctggaagaaaaagatgcccag
ttttctgattctctcattgccaatctgctgcgactgatcaagaaaatgaaacccaaacca
aaagactctatcaatgagaggctttctgagccatcttgggatgaaagagagaaagaagaa
gaagaaaagaaaagcaagctcgaaattaacaagcagctgttcccagctttggctatggca
aatgatcccaggattagaatgatgttagattctgatgatgaagagtatcatcttactgag
attactagtggaaaggaaaacaaaggcacagaggaaaaagttcagcttccagtaatcaaa
ggtgaagatgcgcaagtagctgaccaaatgatggatgaattggaagcacttctgtctagt
gcaaaacaagaaagtcagaaaaaaagccatgggcatgagaagaaatcccgcaggagcagg
agtcgtgatcgagtgaaagaaaagaaaaagagacatcactctcgaagtagatccagaagt
agacggcgatctcgaagtcgatcgaggtccaggaatcaagatcgcaaaaagcgtaggcac
agtcgctcccgcagcagagacagagaccacaaacgggatagagaccacaagagagatcat
gaaaggactagagacagtgatcgtgacaaggaatctcggcagaaactgagggatcgtgaa
gttcaggatggagagagactcaaaaagcaggaacaatacaatgatatccctctggagcct
cttgtaggacatatatatgcagggaaagtcaccaccatcatgcagtttggctgttttgta
cagcttgaaggacttcgtaaacgatgggagggactggtacatgtttcccagctccggcga
gaaggaagagtgacaaatgtcagtgatgtggtcacaagaggtcagaaagtcatggttaaa
gtgttatcatttacaggccagaagaccagcttatcaatgaaggatgtcgatcaagattca
ggtgaagatttgaaccctcagctgacacgcagtattgttggtggggaggtaaagaatgac
gagtcagatgccaggaaccctgaccgcccatcaacactaccattggtgaatgccccagaa
gtcgatgattcaggagaagtgcgaacattcaagcgcatttcttcaccagaacggtgggag
ctgaaacaaatgatggctgccaaagccatcgaaatcacagagctgccagactttgatgat
gagactggactccttcccaagcaagatgactcagatgaagatattgaggtggaaattgtg
gaggaggaaccaccttttctttctggtcatggtcgacactgggtggacctcagtcctgtg
aaaattgtaaaaaatcctgatgggtctttggctcaatcagccatgatgcagagtgccctg
caaaaggaaagacgagaactgaaacaangccagagagaggctgaggcaggtgctgtgcct
gcaggaatcaacaccaactggattgatcctatgcctgatgctgacagcagaaagttggca
gcaaacttaagaggtatcggcatgacgccacatgaactgccagaatggaagagacacatc
actggtgggcccaaggcttcttatggaaaaagggagaaaaagtccattcttgagcaaaga
caaagtcttccaatatttaaactcaaagaagagttgttgaaggctgtacatgacaaccag
atcctcattgtcattggcgagactggttcagggaagacaactcagatcacgcaatatttg
gcagagagtggctatactactcgtggaaagattggctgcnaccagccacgtcgagtagct
gccatgtctgtggcaaagagggtgtcagaagagtttggttgcagattaggtcaagaggtt
gggtacacaatccgttttgaagactgtacaagtcctgagacaaagatcaaatacatgaca
gatggtatgctgcttcgagagtgtcttattgatccagaccttcttcagtatagtgtcgtc
atgttggacgaggctcacgagcgaactatacatactgatgttctgtttggtcttcttaag
caggctgtgaaaaaacgcaaagagctgaaactgattgtcacctctgccaccctggatgcc
atcaaattctctcaatacttctttgaggcaccaatcttcaccattcctgggcggacatac
ccagtagagattctgtatactaaagaagcagagactgactaccttgatgcatcaatgatt
actgtgatgcagatccacctgacagagccaccaggtgatgtgctgctgtttctcactggt
caagaagagattgactctgcatgtgaaattttgtatgaacggatgaaggccctgggtcca
gaagtcccggaccttattattcttcctgtgtattcagccctgccttcagagatgcagaca
agaatctttgagccagcaccaccaggatcaaggaaggttataattgccacaaacatagct
gagacatcattgaccatagatggcatttactatgtggtagacccaggatttgtcaagcaa
aatgtgtacaactccaagactggcatggaccagctgatcgtcacaccaatttcacaggca
caagccaagcagagagctggtcgtgctggccgaacagggccaggaaaatgttaccggctc
tacaccgagcgtgcttatcgggatgagatgcttccaacgaatgttcccgaaatccagcgc
accaatcttgctagcactgtgttgtcgctcaaagcgatgggcatcaatgatcttctctct
tttgattttatggatgcaccaccaatgcagacgttgatttctgcaatggaacagttacat
gcactcagtgccctggatgatgaagggctgctcacacgccttggtcgacgggtaaatgca
gagttcccactggagcctatgctgtctaagatgctgatcatgtctgtacacctatcatgc
agtgatgaaatcctgaccattgtctccatgctgtcagttcaaaatgtcttctacagaccc
aaggataaacaagcattggctgatcaaaagaaggccaaatttcaccagcctgaaggggac
catttgactcttttgtcagtgtacaattcgtggaagaacaacaaattttcatcaccatgg
tgttatgaaaactttgttcaaattcgaacccttaagcgagcacaagatgtgcgcaaacaa
atgttgggcattatggacaggcacaagctagatgtggtgtcatcaggcaagaacacagca
agggttcaaaaagccatctgcagtggtttcttccgtaatgctgccaagaaggacccacag
gaaggatatcgcactatcgttgattcccaggttgtctatattcatccttcaagtgctctg
ttcaacagacagccagactgggtaatataccatgaattggtgatgaccactaaggaatac
atgcgagaagtgacagctatagaccccaagtggcttgtggaatttgcaccaaagtttttt
aaattctcagaccctacccgcctcagcaagcagaaaagcagcagaagattgagccattgt
tataacaagtatgagnagcccaatgcttggaggatctccagagctttcaggaagttccac
accaaagtaacattctga
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integrated database retrieval system
