Pomacea canaliculata (golden apple snail): 112564927
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Entry
112564927 CDS
T05881
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112564927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112564927
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112564927
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112564927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
112564927
NCBI-ProteinID:
XP_025095863
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Position
LG1:3959001..3987360
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AA seq
726 aa
AA seq
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MADKRRLQGEIDRCLKKVDEGVEIFEDIWQKVQTATNSNQKEKYETDLKKEIKKLQRLRD
QIKTWLASNDIKDKQSLTDHRKLIETQMERFKILERETKTKAYSKDGLGAAAKLDPQTKE
KGEMTTWLAMQIESLQIQVDQFECELESMECSSKKKKMEKDAGPRADELKTLRDRHKYHM
KQLELVMRAVDNDAVPLEQIKNIKEDIEYYVQSNQDPQFRENEFLYDDLDLEEICEPGTQ
APGTSPFDADDHDKLDSNTASTNSSSPSPSPSVSTNHSTEKIDEKERKRHKSQSEEVCGK
QILYMVLKKLHTSAPLISKIQTTPSKQSSQSNSAPSQNTEANSINSNHHPLLTATPPLAA
YAAAASSQQNNIVDSKPQVNSVNDHMAASNMNSSNVPASGSANPNTVSLTSSGNPSVPSA
PSPHVGAVGVAASISSSSSTSGINSIQISSSRSDVPVVMNGPHSAGSHFILKNQESLSSL
QSIAQEAVSNAELDARVTSPLQRTDSAGVFINPSQAPSQPTAPSPKDQSSAVSSTLTSQA
LTVSQVASSLQTNLQNSGSQTTSIHLIPLLGVAPLGPVPLGKDNVYQLTMIEAAFHHLPH
PSDSERLRHYLPRNPCPTPSYYQQVPPPHADSVDFFQKLSTETLFFIFYYMEGTKAQYLA
AKALKKQSWRFHTKYMMWFQRHEEPKSITEDYEQGTYIYFDYEKWGQRKKEGFTFEYRYL
EDRDLN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaggaggcttcaaggtgagatagatcgatgcctgaaaaaagtggatgaa
ggtgttgagatctttgaagatatctggcaaaaggtccagacggcaacaaacagcaaccaa
aaagaaaaatatgaaacggacttaaaaaaggagatcaagaaattgcagaggttacgtgac
cagataaagacatggcttgccagcaacgatatcaaagacaagcagtctttaacagatcat
cgaaaattgatagaaactcaaatggagaggttcaaaattttggagcgtgagacaaagacc
aaagcatattcaaaagatggtcttggtgctgcagcgaagctggatccacagacaaaagag
aaaggagaaatgacaacttggcttgcaatgcagatagagagtttacagatccaggttgac
caatttgagtgtgagctggaaagtatggagtgttcttccaagaaaaagaaaatggaaaaa
gatgctggacctagagctgatgaattgaaaactttgcgtgataggcataaatatcacatg
aagcagcttgagctggtcatgagggctgttgataatgatgcggtgcccttagagcagatc
aagaacattaaagaagacattgagtattacgtgcagtccaaccaagatccacagtttaga
gagaatgagtttctttatgatgatttggatttggaagagatttgtgagccaggtacacag
gcgccagggacatctccatttgacgcagatgatcacgacaagttggatagcaatacagcg
tcaaccaattccagttcaccatcacctagtccaagtgttagtaccaaccattccacagaa
aaaattgatgagaaagagagaaaaaggcacaaatctcagtcagaggaggtatgtgggaaa
caaattctttatatggtattgaaaaaacttcatacatcagcaccacttatatcaaaaatt
cagaccacacctagcaagcagtcttctcaaagcaattcagcaccatctcaaaacacggaa
gccaacagtataaatagtaatcatcatccacttttgacagcaacaccacccttagcagca
tatgcagctgcagcatcaagtcaacaaaacaacatagttgactcaaagcctcaggtgaac
tcggttaatgaccacatggcagcaagcaatatgaacagtagcaatgtgccagcttcaggc
tctgccaacccaaatactgtttctctcacctcctctggaaatccctctgtgccatctgca
ccatcaccccatgttggtgctgtgggtgtggcagcctctattagctctagctcctccacc
tctgggatcaattccattcagatcagcagcagtcggtcagatgtacctgtggtcatgaat
ggacctcatagtgcaggcagccatttcattctgaagaatcaggaatccttgtcatctctg
caatcaatagcacaagaagctgtatcaaatgcagaactggatgctcgagttacaagtcct
ttacagaggactgactcagcaggtgtcttcataaatccttcacaagcaccttcacaaccc
accgctccttcacctaaagaccagtcatcagctgtctccagcaccttgacgtctcaagcc
ctaactgtttcgcaggttgcaagcagcctacaaacaaacctacagaactctgggtcacag
accactagcatccatttgattcctcttttgggagttgctcctttgggtcctgttcccctt
ggcaaagacaatgtttatcagctgacgatgattgaagctgcctttcatcacttgcctcac
ccttctgattcagaaaggttaaggcactacttaccacggaacccgtgtcccacaccatcg
tactaccagcaagtcccacctcctcatgctgattctgtggattttttccaaaaattgtct
acagaaacacttttcttcatcttttactacatggagggaaccaaagctcaatacttggca
gcaaaggcattgaagaaacaatcatggaggtttcatacaaaatacatgatgtggttccag
cgacatgaagaacctaaatctataacagaagactatgaacagggcacatacatctatttt
gactatgaaaagtggggccaaagaaagaaagaaggttttactttcgagtaccggtatttg
gaagatcgggacttgaactga
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