Pomacea canaliculata (golden apple snail): 112565031
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Entry
112565031 CDS
T05881
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcan03009
]
112565031
Ribosome biogenesis [BR:
pcan03009
]
Eukaryotic type
90S particles
Other 90S particles
112565031
Pre-60S particles
Other pre-60S particles
112565031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
TOR1L1_N
Katanin_con80
Motif
Other DBs
NCBI-GeneID:
112565031
NCBI-ProteinID:
XP_025096043
LinkDB
All DBs
Position
LG5:complement(28779612..28799719)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKVKTKKVVKWKRHNSCVSNPVQKKFREAAKNRFLEPFGKKSTGPSSLTVESLKKHDIGE
QDSAEFDAQTFKTWATDFTCVSNATFGSVLRMHPNSAHQREILAVLAAITEVIKEQGGKE
TDTEYFAALMTTLETTESAESVTAIAHLLSLVIKRVPVPVLKSRFSQISKKLLDIISTYA
DKDGTSILKSLLLSLASLLRVQEMGVWSQSSVQHVFNCILTFLTHKKPKVRKSAQQAVKI
VLKGSLFMTQPDPPPQHPAASLVAKFCVQVIESQGGANEALDTLHILGLLRDIMSTFPQN
SIKSTCETVLRVMTVSNVLVTAAGLAVLHGLFSAQPQKSSLPAQLNAQIITALYDYQPSE
NDSQKMPAWLAVMEQAHINLVRLDGNLCISHLPKLFSVGMTCLLSERREVAQAAAKTMEL
LLQECVGKESENLAALTKTTVDFSQTPLGKIVRALESGLSYQFHSSWDLVLHLLGVGLEM
LGKICPSLLKKCLRSMAELRETVNFAFSSQLDAAIGKAVKSIGPCLVLESIPLKFTGNED
NLDLARSWLLPIIRDNVCETELSFFTSHFLPLAARFRQKSIECTDQKKTAAAKTYESLQL
QIWSMLKGFCTRPTDLSRSFKDIAKVLGTALNERPDLRMDIMAALRTLITHSKSNEADLE
AVGKFSKNFVPILFNLYTSNPDNPKDPQRLAVLETTKVFFTVSDFQLVISYLDKCLSKIG
EENVESFRKIALLDLAIAMVPYADHAHLKQLLDVAISNVEATDRSLQKKAYRIMEEICAC
SSDACKNFLSKYLDKLQELLLSSLSSANPNTRAPRLRCLIHILRQLNEPQTSFICAVVPE
AILCTKVVGERARVAAYNLIIEISKTLLRWNSNKTEEEVLAGYVDLLLAGLAGSPQLISG
TLLALTRVMYEYKENLSGDVLSNLVQNVCLLLKSKTREVVKAALAFIKVMLGAYSTTILT
AHLSEMLSGMVSMKQDCKHHCHAKTKQIYLKLIKKFGYEAVHSMTPESVHKVLVNIRKTL
DREKRQKNKNDGDEADDATEETPRKPQSESIEELLRDIDSEEEEPSNVKERRILTAKRRK
GHQTWLKEESEDITDFMDTGAAKKVTATKPEEKTVSKTAKKDHGFKVAPDGRLIITEPKD
DKGEKLASDQEEDLDDLLTAIEGGSEKKRRKRLRNAEAADENENEPSTKYRAGGSGIHRP
LQKKATDFGKEYRAKKAGGDIKKKGKPDPYAYVPFNFTSLNKRKQAKMKGQFANLVQGAR
KGAQKAKKEKRKRK
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaaaacgaaaaaggtcgttaagtggaaaagacataacagttgtgtctctaat
ccagtccagaagaagttcagggaggctgcaaaaaacagatttttggaacctttcgggaag
aagtctactgggcccagttcactgactgttgaaagtctaaagaaacatgacattggagaa
caagactctgcagagtttgatgcacaaacatttaagacttgggctacggattttacttgt
gtgtcaaatgccacttttggaagtgttttgagaatgcatccaaattcagctcatcaaaga
gagattctggctgtactggctgcaatcacagaggtcatcaaagaacagggaggcaaagaa
acagatactgaatattttgctgctttgatgaccactttagagactacagagtctgcagaa
tcagttacagcaatagctcatctgcttagcctggttatcaaaagggtgccagtcccagta
ctaaagagccgattttcacaaatttccaaaaaactgctggatattatttccacatatgct
gacaaggatggcacctctatactgaaatcactgctgctgtccctggcaagcttactgcga
gtgcaggagatgggtgtatggtcacagtcctctgtgcagcatgtttttaactgcattctt
acttttctcactcacaaaaagccaaaggttcgcaagtctgctcaacaagcagtgaaaatt
gtactgaagggcagtctttttatgactcaaccagaccctcctcctcaacacccagctgcc
tcacttgtggccaaattttgtgttcaagtcattgagtctcaaggaggtgctaacgaagca
ctagacactctgcacattttaggtctgctgcgtgacattatgtcaacatttccacaaaac
agcatcaaatcaacatgtgaaacagtcctaagggtcatgactgttagcaacgtgctggtg
acagctgcaggactagcagtacttcatgggctgttctcagcacagcctcaaaagtcatct
ttgcctgcacagttaaacgctcaaatcatcacggcattgtatgactaccagccttcagag
aatgacagtcagaaaatgcctgcatggctggcagtcatggaacaggctcacatcaactta
gttcggcttgatgggaatctgtgcatcagtcatctgccaaagttgttttctgtgggtatg
acatgcttgttgtcagaacggcgtgaagttgcacaagctgctgcaaaaacaatggagctt
cttctgcaagagtgtgttggaaaagaatcagagaatctggcagcacttaccaaaacaaca
gtcgactttagtcagactccactgggcaaaattgtgcgagcattagaatcaggcctcagc
tatcagttccattcctcttgggatctagtactgcacttgcttggtgtgggtctagagatg
cttggcaagatttgtccctccctgttgaaaaagtgcctgagatcaatggcagaattgcga
gagaccgtgaattttgccttctcatcccagcttgatgcagctataggaaaggctgttaag
tccataggcccttgtcttgttctggagtccattcctctcaaatttactggaaatgaggat
aaccttgatctggcaagaagctggcttctgcccataattcgtgacaatgtttgtgaaaca
gagctgtctttcttcacatctcacttccttccccttgctgctcgcttcaggcaaaagtct
atagaatgtactgatcaaaagaagactgctgcggcaaaaacatatgaatctctgcagttg
caaatatggtcaatgctgaaaggattctgcacaaggccaacggatctttcacggtctttt
aaagacatagccaaagttttggggacagctcttaatgagcgaccagacctcagaatggac
ataatggcagctttgagaaccctcatcactcatagcaaaagtaatgaagcagaccttgag
gccgttggtaaattctcaaaaaactttgtgcccattctgtttaacctctacacatccaat
ccagacaaccctaaggaccctcagcgtctagcagttttggaaacaaccaaggttttcttc
acagtctctgattttcagctggtgatttcctatctagacaagtgcttatcaaaaataggt
gaagagaatgtagagtcctttagaaagattgccttgctagaccttgccatagctatggtg
ccatatgcggaccatgcacacttgaaacagctcttggatgttgcaatttcaaacgtggag
gcaacagaccgctctcttcagaaaaaagcttatcgcataatggaagagatatgcgcctgt
tcttctgatgcctgcaagaactttttgtcaaaatacttagataaacttcaggaattgctg
ctgtcttctctctcaagtgccaaccctaatactagagctccacgcctacggtgtctgatt
cacattcttcggcagctaaatgaaccacagacatctttcatatgtgcagtagttccagag
gccattctctgcacaaaagttgtaggagagagagctagagttgctgcctacaacctcatt
atcgagatttcaaagactcttttacgctggaactcaaacaaaactgaagaagaagtttta
gcaggatatgtcgacctgctgttggctggtttggctgggtctccacagctgatcagtggc
accttattggcccttacacgagtcatgtatgagtacaaagagaatttgtcaggggatgtg
ttgtccaacctggtgcaaaatgtatgcttacttctaaaatcaaagacccgagaagtggtt
aaagcagcccttgccttcataaaggttatgttaggtgcctactcgacaaccattcttaca
gcacacctgtctgaaatgctcagtggaatggtttccatgaaacaagactgtaaacaccac
tgccatgcaaagacaaaacagatatatttaaaactcatcaagaagtttgggtacgaagcg
gtacacagtatgacacctgaaagcgttcacaaggtgctagtcaacatacgcaagacgctg
gaccgagagaaacggcagaagaacaaaaatgatggggatgaggcagatgacgccacggag
gagacgcccagaaaaccacaatctgaatcaattgaggagcttttgcgggacattgactca
gaggaagaagaacccagcaatgtcaaagagcgtaggatattgacagccaaaagacggaaa
ggacatcagacatggctaaaagaagaaagtgaagatattacagacttcatggacacaggg
gctgccaagaaggtgacagcaacaaagcctgaagaaaaaactgtgtccaaaacagcaaag
aaagatcatggctttaaggtagcaccagatggacgtctcatcatcacagagcccaaagat
gacaaaggagaaaaattggcctctgatcaggaagaggacttagatgacttactgacagcc
atagaaggtggatcagagaaaaagcgaagaaagaggctgcggaatgcagaagctgctgat
gaaaatgaaaatgagccatctacaaaatacagagctggaggaagtggcatccatcgacct
ttgcagaaaaaagcaacagactttggaaaagaatacagagctaagaaggctggtggagat
attaagaagaaaggcaaaccagatccatatgcctatgttcctttcaactttacaagcttg
aacaaaagaaaacaggccaaaatgaagggtcagtttgcgaacctcgtacaaggagccagg
aagggcgcacagaaagccaaaaaagaaaaaagaaaaaggaagtga
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