Pomacea canaliculata (golden apple snail): 112565082
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Entry
112565082 CDS
T05881
Name
(RefSeq) protein CASC3-like
KO
K14323
protein CASC3
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112565082
03015 mRNA surveillance pathway
112565082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112565082
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112565082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
112565082
NCBI-ProteinID:
XP_025096125
LinkDB
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Position
LG1:35611451..35622627
Genome browser
AA seq
918 aa
AA seq
DB search
MADRRRRRTLEDEGEETVSPSQVAEVKRRPSECESEGEAADGDIASEYESATEESREAGG
DEEEEEESEEGSEEEDTEEETEEGSENEYSDEDVIIEEEEEQIVEERQSGDGEEQPDKEH
VDDDEDKKNPAYVPRKGAFYEHDLRTGEEAPQEPELKPKKKLWQDEGKWAHDRYHDDMQA
PKSREELIALYGYDIRASDKPPDAPPPRKSSNRGRRQPQRRAKLEEYIEPPQHQRFAVID
TTDQHRKPRGKPKQQSYEDYEDDIDVPYMATIDTTESSANQYRSKNQQRRGGPRLRRDYP
SFSERSSGNPGNRLQDAEFKEERFFHPRESRPSRFQDAHHKDVPSQETRSRDAQILRDQP
QDTKLQEKRNQDAYRIKNSYRKEEHADSNVPYNSQNNNFGGKRGGARGGVANRMQVREHK
IRGFVHGEVERDQQPSNSEHSNSEVVPNLREFTNSTYKNTTVQEGGKSMQVDVTGPTGVR
GTQTSQDVVISNKENVQTISVTITNTTTERKSYAKERRGKGGSRTGLGQVAVEEVDSTGD
SKAVSVAENSEAVQSVSTQGSGDQKPAGNTYASGSNGSKQEAREPSRPKRYSSQRQRSMP
EPVYPSTTPQQGPVDTGTKYYNQAVYPPTPPAYFHPEGPPPIPQRPPPSQDPATFSPAML
QPPIPFHLPVSGPGMPSPPRLFGPSAGGTPPVSISNASPTLLPAPYLAAPGVIYSAPPPP
PVATAPYQVPLAYTSPPTAPPPAALTQPPLASPQNQSEVYRGGTTYYPPHLQQPSARSPA
RRPKVAIPIVDPQELKKKNVTNGKVEERRVDSGMQETMSSDQDSVQHQELSTSDETEQLD
LSKTVKTVPAGEKEDCTVNPPVPEKPMTAASPVSTVTADPKMLESLSTDSSMPIRFGDIG
ATENVENASSAVTVEQTC
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgacgaagaagacgtacgctcgaagacgaaggggaagaaacagtctctcca
tctcaggttgcagaggttaaacgaagaccctcagaatgtgaaagtgagggagaagcagca
gatggagacattgcatcagagtatgagagtgctacagaggagagtcgtgaagcgggggga
gatgaggaggaagaagaagagagtgaggagggcagtgaagaagaagatacagaagaagaa
acagaagagggttcagagaatgaatactctgatgaagatgtgatcatagaggaggaagaa
gagcagattgttgaagagaggcagagtggtgatggggaggagcagccagataaggaacat
gtagatgatgatgaagacaaaaagaatccggcctatgttcctcgcaaaggggctttttat
gagcatgatctacgcacaggtgaagaagcaccacaagagccagaactaaagcccaagaag
aaactatggcaggatgaaggaaagtgggcacatgaccgataccatgatgatatgcaagcc
cccaaatcccgcgaagaactaattgcattgtatggttacgatattcgtgctagtgataag
ccaccagatgcaccccctcctcgcaagagtagcaaccggggacgaaggcagccacaaagg
agagcgaaactagaagaatatattgagcctccacagcatcagcgatttgcagttattgat
accacagatcagcataggaaacctcgtggaaaaccaaaacaacagtcatatgaagactat
gaggacgatattgatgttccatatatggcaaccattgacacaacagagagctcagctaac
cagtatcgctccaagaatcagcaacgtcgaggaggaccacgtctaagaagagattatcca
tcattcagtgaaaggtctagtggcaacccagggaatcgcttacaggatgcagaattcaaa
gaagagcgctttttccacccacgagaatcacgtccttccagatttcaggatgctcaccac
aaggatgtgccatcacaagaaactcgctccagggatgcccaaatcctcagagatcaacct
caagatacaaagctgcaagagaaacgaaatcaggatgcctatagaatcaaaaacagttat
cgaaaagaagagcatgctgacagtaatgttccatataacagccaaaacaacaactttgga
ggaaaacgaggaggtgctagagggggtgtggctaatcgtatgcaagtgcgagagcataaa
atccgaggttttgttcatggtgaggtggagagagatcagcaaccatcaaacagtgagcat
tccaacagtgaagttgtgcccaacctgcgagagtttactaattcaacgtacaagaataca
accgtgcaagaaggtgggaagagcatgcaggtggatgtgacaggtcccacaggggttagg
ggaacccagaccagccaggatgttgtcatttccaacaaagagaatgtacagaccatcagt
gttactatcacaaataccacaacagaaaggaagtcttatgcaaaagagagacgcggaaaa
ggtgggagtcgcactggacttggccaggtggccgtagaggaagttgatagtaccggagat
agcaaagccgtcagcgtggccgagaattcagaagctgtgcagtcggtcagcacccaaggt
tcgggtgatcagaaacctgctggaaacacttatgcttctgggtctaatgggtctaagcaa
gaagcaagggaaccaagtcgtccaaaacgctattcatcacaacgccagcgtagcatgcct
gaaccagtctacccaagcacaactccacagcagggccctgtagacactggaactaaatat
tacaaccaggctgtgtatccacctacgccacctgcttatttccaccctgaagggccacct
ccaatccctcaacgacctccaccatcccaagatcctgctaccttcagtcctgctatgcta
cagccgccaataccttttcaccttccagtgtctggtcctggaatgccaagtccaccacga
ctctttggcccctctgcaggtggtactcctcctgtgtccatcagcaatgcttctccaact
cttttacctgccccatacttggctgcaccaggtgtcatctacagtgcccctcctccaccc
ccagtagcaactgcaccataccaggtgccactagcatacacgtcaccacccactgcacca
cctccagcagcgctcacccagccaccattggcctcaccacagaatcagtcagaggtgtac
cgaggaggcacaacctattacccacctcaccttcagcagccctctgcacggtcacctgca
cggcgaccaaaagtggctattcccattgtagatccacaagagctgaaaaagaagaacgta
acaaatggcaaagtggaagaaagaagagttgatagtggcatgcaggagaccatgtcaagt
gatcaggattctgtgcaacatcaggaactgtcaacatctgatgagaccgagcagttggac
ctttcaaagactgtcaaaactgtgcctgcaggagagaaagaagactgtacagtcaatcct
ccagtcccagaaaagcccatgactgcagcctctccagtttctacagtgactgctgaccca
aagatgttggaatcattatctactgacagttctatgccaatcaggtttggtgatataggt
gcaacagagaatgtagaaaatgccagctctgctgtcacagttgagcagacttgctga
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