Pomacea canaliculata (golden apple snail): 112565141
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Entry
112565141 CDS
T05881
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112565141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112565141
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112565141
mRNA degradation factors
5'-3' decay
Lsm complex
112565141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF7666
Motif
Other DBs
NCBI-GeneID:
112565141
NCBI-ProteinID:
XP_025096238
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All DBs
Position
LG5:complement(4400202..4403425)
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AA seq
136 aa
AA seq
DB search
MVVMNMSYLPGTASLVEEIDKKLLVVLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKK
YGDIPRGIFIVRGENVVLLGEVDLENEDKLPLEEVSIDEILDMQREMQIAKEREDERKRK
ALQERGMHFTEHPEDI
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgatgaacatgagttacctaccaggtacagccagtttagtggaagaaatcgac
aaaaagctgctggtagttctgagagatggaagaaccttaattggctacttgcgaagcata
gaccaatttgcaaatctagtccttcacagaactatcgaaaggatacatgtagggaagaaa
tatggagacattcccagaggaatatttattgtgcgtggagaaaatgtggttcttcttgga
gaagtggatctggaaaatgaggacaaactaccattggaagaggtttcaattgacgaaatt
ctagacatgcaacgagaaatgcagattgcaaaagagcgggaagatgaacgcaaacgaaag
gctctccaggaaagaggaatgcattttacagaacaccctgaagacatttga
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