KEGG   Pomacea canaliculata (golden apple snail): 112565270
Entry
112565270         CDS       T05881                                 
Name
(RefSeq) splicing factor 3B subunit 1-like isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
pcan  Pomacea canaliculata (golden apple snail)
Pathway
pcan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    112565270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcan03041]
    112565270
   03036 Chromosome and associated proteins [BR:pcan03036]
    112565270
Spliceosome [BR:pcan03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    112565270
 Complex B
    112565270
 Complex C
   U2 SnRNP specific factors
    112565270
Chromosome and associated proteins [BR:pcan03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    112565270
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT Htt_N-HEAT_1 HEAT_2 Vac14_Fab1_bd XMAP215_CLASP_TOG CEP104-like_TOG DUF2298 UNC45-central
Other DBs
NCBI-GeneID: 112565270
NCBI-ProteinID: XP_025096418
LinkDB
Position
LG5:complement(33079310..33102502)
AA seq 1333 aa
MAAATHEEIEEQVRNIQAKRQGLSLHEDEHVGLGSAGHFDQEIYGHGSYDNSRFVGYDTS
IAVTDEPDDEEEPTTVTKSTYTAPLNLLHETANDKDYDPLAEHRIPKISDREDEYRARKR
QMIISPERYDPFAEGGKTPDPKLGARTYVDIMHERALNQEQIGLRQQMQEKARAGELHVV
NGSSASEAQKQAGKRRRWDQAAGESSAQPAKKKASSWDAAETSVPTPSHSRWDETPGRPK
GSDTPGATPSTRAWDATPGHATPGAATPGRETPGHQASSARKNRWDETPKTERDTPAHGA
GWAETPRTDRGGDLIQETPTPSASKRRSRWDETPGGATPSGMTPSFTPGGMTPTGMTPGG
MTPTGAMTPSGGMTPSGATPSGVTPTGPKAMAMATPTPGHLMSMTPEQLQAYTWQREIDE
RNRPLSDDELDTMFPPGYKVLQPPAGYVPIRTPARKLIATPTPMMGTGTPTGFRMQTPDS
KTHVVDMQPKGNLPMMKPDDMQYFDKLLVEVDEETLSPEEQKERKIMKLLLKIKNGTPPM
RKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYV
HKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARA
FAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLKNLVEIIE
HGLVDEQQKVRTITALALAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIG
YLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCATDGVEPQYIKDEIL
PPFFKHFWNQRMALDRRNYRQLVDTTVEIANKVGAAEIVSRVVDDLKDEAEQYRKMVMET
IEKIMSNLGAADIDSRLEEQLIDGILYAFQEQTTEDVVMLNGFGTVVNALGKRVKPYLPQ
ICGTILWRLNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLG
SILGALKSIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVS
AREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVC
TTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFMFEYIGEMGKDYIYPITP
LLEDALMDRDLVHRQTAMAAIQHMALGVAGFGCEDALTHLLNYVWPNIFETSPHVVQAFM
GAVEGLRVAVGSSKILQYTLQGLFHPARKVRDVYWKVYNTVYIGAQDAMIPAYPRVPNDA
KNQYIRYELDYVL
NT seq 4002 nt   +upstreamnt  +downstreamnt
atggcggctgcaacacacgaagagattgaagagcaggtgcgaaatatccaggccaaaagg
caagggctttctctgcatgaagatgaacatgttggtcttggatccgcaggacattttgat
caggaaatttatggacatggttcctatgacaacagtcgatttgttggctatgacacatct
attgcagttacagatgaaccagacgatgaagaagagccaacaacagttacaaaatcgact
tacactgctcctttgaaccttcttcatgaaacagccaatgacaaggactatgatcctctg
gctgagcatcgaattccgaaaatttctgatagggaggatgagtacagagccaggaagaga
cagatgattatctctcctgaaagatacgacccctttgccgaaggtggaaaaacaccagat
ccgaaacttggagcccgtacatatgttgacatcatgcatgaaagagctttaaaccaagaa
cagattggattacggcagcagatgcaggaaaaggcaagagctggagaactgcatgttgtg
aatggaagttcagcatcagaggcacagaaacaggctggaaaacgacgtcgttgggaccaa
gcagcaggggagagttctgctcagccagccaagaaaaaagcttcgtcatgggacgctgca
gaaacgtctgttccaacaccttcacacagtcgatgggatgagactcctggtcgccctaaa
ggtagtgatacacctggggccacgccatcaactagagcttgggatgctacaccaggtcat
gctacaccaggtgcagcgactccaggcagagagactccgggtcatcaagcttcaagtgca
cgcaagaacagatgggatgagactcccaagacagagcgtgacacaccggctcatggagca
gggtgggcagaaacaccacgtacagaccgaggtggtgatctgattcaagagactcctact
ccaagtgccagtaagcgtcgctcaaggtgggatgaaactccgggaggggctactccaagc
ggaatgacccctagttttactccaggtggcatgacaccaacaggcatgactccaggaggc
atgacacctacaggagcaatgacaccaagtggcggcatgactccatcgggagcaacacca
agtggagtaacaccaactggtccaaaagctatggctatggctactccaacacctggtcat
ttgatgtccatgacaccagaacagttgcaggcatacacttggcagcgtgaaattgatgaa
aggaacagacctctgagcgatgatgaacttgacaccatgtttcctccaggttataaggtt
cttcaaccaccggctgggtatgtaccaatccggacaccagcacgaaagctgattgcaacc
ccaactccaatgatggggacaggtacaccaacaggttttcgcatgcaaacacctgacagt
aaaactcatgttgttgacatgcagcctaaaggtaatttaccaatgatgaaaccagatgac
atgcagtacttcgacaaattgctggttgaggttgatgaagaaactttgtctccagaagaa
caaaaggaaagaaagatcatgaagttgttgttgaagataaaaaacggcacacctcctatg
agaaaggctgcccttcgtcaaattaccgacaaagccagagagtttggggcagggccacta
tttaaccagattctcccattacttatgtcaccaaccctggaagaccaagagcgacacctg
cttgtgaaagttattgaccgcatcttatacaagttggatgacctggttcgtccatatgtg
cacaagattttggtggtcattgagcccctactgattgatgaagactattatgcacgcgtg
gaaggccgtgaaatcatatccaatttagcaaaggctgccggtctggccacaatgatctct
actatgcgcccagatattgataacatggatgagtacgtgcgtaacaccacagctcgcgcc
tttgctgtggtagcctctgcattaggcatcccttctcttctgcctttcttgaaggctgtg
tgcaaaagcaagaagtcatggcaggctcgacatacaggaatcaaaattgtgcagcagata
gccatccttatgggttgtgccatactcccccatctcaagaaccttgtggagatcattgaa
catggtcttgttgatgaacagcagaaagtgcgcacaattactgccctcgcattggctgct
ctggcagaagcagccaccccatatggtattgagtcttttgacagtgttctgaagcctctc
tggaaaggtatccgtcaacacagaggaaagggtcttgctgctttcctgaaagccattgga
tacctgatacccttgatggatgcagagtatgctaactactacacaagagaagtcatgttg
atccttattcgagagtttcagtctcctgatgaggaaatgaagaaaattgttctgaaggtg
gtaaaacagtgttgtgccactgatggtgtagaaccccaatatatcaaggatgaaattcta
cctccattttttaaacacttctggaatcagcgcatggcactggataggcgaaactatcga
cagctggtggacacaacagtggagattgcaaataaagtgggggcagctgaaattgtctcc
agagtggttgatgacctgaaggatgaagctgaacaatatcgcaagatggtgatggaaact
attgagaagattatgtccaatctgggtgcagcagacattgactcacgcttagaggagcaa
cttattgatggaatcttatacgccttccaagaacagacaactgaggatgttgtaatgctc
aatgggtttggaactgtcgtaaatgccctcgggaagagagtgaagccttacttacctcag
atctgtggtacaatcctttggcgtctcaataataaatctgcaaaagtgaggcagcaggca
gctgatcttatctcacgcattgctgttgtcatgaagacatgccaggaggagaaactgatg
ggccaccttggagttgttctttacgagtacctaggcgaggaatacccagaggtgttaggt
tctattctgggtgctcttaagtctattgtcaacgttattggcatgactaaaatgacgcca
ccaatcaaagatctgcttcccaggcttacacctattcttaaaaacaggcatgagaaggtg
caggaaaattgcattgatcttgttggacgcattgctgatcgtggtgctgagtttgtttct
gcaagagagtggatgagaatctgttttgagctgctggaattgttgaaggctcacaaaaaa
gcaatccggcgagccacagttaacacatttggatacattgccaaggcgattgggcctcat
gatgtgctggctacacttctcaacaatctgaaagtacaggagcggcaaaatcgtgtgtgt
acaacagttgctattgccattgtggcagaaacatgctcaccattcacagttttgccagcc
ctgatgaatgaatatcgtgtaccagagcttaatgtgcagaatggtgtactcaagtctctc
tccttcatgttcgagtacattggggagatgggcaaagactacatctatcccatcacaccc
ctactagaagacgctctcatggacagagacctggtgcatcgacaaacagccatggcagcc
attcagcacatggcacttggtgtagcgggctttggatgtgaggatgccctgacacacctt
ctgaactatgtttggccaaatatctttgagacttcaccacatgttgtgcaggccttcatg
ggagcagtagaagggttaagggtggcagttggttcctccaaaatcctgcagtacacatta
cagggtcttttccatccagcaaggaaagtgcgtgatgtgtactggaaggtgtataacaca
gtttacattggtgctcaggacgccatgattcctgcctatcccagagtacccaatgatgcc
aagaaccaatacatcagatatgaactggattatgttttgtag

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