Pomacea canaliculata (golden apple snail): 112565607
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Entry
112565607 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SHPRH-like
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcan04121
]
112565607
Enzymes [BR:
pcan01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112565607
Ubiquitin system [BR:
pcan04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112565607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
TPR_12
ERCC3_RAD25_C
Prok-RING_1
RasGEF_N
TPR_10
TPR_1
Motif
Other DBs
NCBI-GeneID:
112565607
NCBI-ProteinID:
XP_025096942
LinkDB
All DBs
Position
LG6:30829044..30853690
Genome browser
AA seq
1674 aa
AA seq
DB search
MGKRKQTTPTQMREEKRQQLQWNMLDGNNGDASSFNSTGSLLIIPDDDPILHQEEEAAIF
SLESNSANNSCTQQSDLKQLNFAKTNFSPNNYCPVFSKEVYDFFQSPQSIILFKQLLEDC
ILCITIHSSITAKDEEWHFEIGRFSFKLQPHPCFQANTVNLPGSSLCWLYISHVQGRHMI
YFEDSYGSNNESIQMFWHLELNVDNVLELFEGLETKHFQLVRGRYDSMKREQEVIIYGRE
SIVMALSYPSEAFRLKPVHKALKKLMCHFHNIGPLYDLSSRLRTEQHDFHQLYEAVMSIQ
QSTKMKATIDVQHPDLKPLLRPYQRDAVVWMLHQECFLPKVSLDDPESLCDLHPLYVEMK
TSCGKTFYYNRHGGSIVKQRPSKTKTPPRGILADEMGLGKTVEVLCLILLHQRPPLPPPS
QLPTLAETQLEDKGPEKETTENDGQEEWCSTTVVTALEAVTQVSQTEETFPDSPVSSGKQ
AKELNAEGAGSYHTVQTSSSIPHISEMQRDMISSAPIIFEKSESNHDISLSMSSKTTKDI
NIDAMEIKQISGQDSTESEKCNTPNNGMSPLTATSSGKLQQHRKLIQQTDSLANSCIERK
QLFECVCGKSKNETNSTRKKIKKALHVVECVDCGAQQHAECLNYDLADAFRGQYKCPHCH
VASTPLPSGATLIISPSQICDQWVEEIMKHIQVKSLNVFVYQGVNRQGFVQPRMLASQDI
VVTTYETLCKELDYVDLPHTNSKNGRRFRHPKRFMAIPSPLVAVEWWRVCLDEAQMVECV
TAKTAEMALRLTAINRWCVTGTPLIHSVEDIYGLLLFLGLDPYCVMQWWRILLWEPYCHG
FQYPLHHALSKVLWRTAKKDVINQILLPEQTEQMCWLTFSPIEDHFYRRLYNKCFDQAMR
NLSGRTDLSTKLNTMDSGTLNKLLQPLLHLRQACCHPQVVRGAFIPIHDSMLTMEELLES
LIKKTRYECEEAHRGKVAAMNGLAALQIIQKQPKEAVELYREVLQSVEECKAELGTDELQ
QLHAMFNLEEVLATKPQGVAPTLRDHQLAAQCKEVQKKYMMKAETYVATSHEQFSSCENT
IQELQQELDEGTDWWLEVIDWAAEREMGGELVLWVRDNLADHTSPYFGASILSFRDTTSL
QYIIDTQLQGLESARNCLLRDLKKLNKKGGLTPDVINQTVECCLRPSNEILKSCPFCKVE
SLLTNYESKLFAFKEGSVFGFLDVDNPTHKVNTIRRGTWADGQTELALKSILSFGRTKRM
QGQSLHFGSVHIKLLDGLKKEFKQLRVLWMALREHVSAIDELKMATIRLRIRHPDEPRTN
RTEVNILEPTEVEAHKQKLMTDKIVNQGELQKKLGQLMYLKNLAKSQHTVSEGKNPEPCP
VCQHKLGHKWSVLRCGHCYCMDCIDTLLTRLPQIGFRTKAVKCPMCREMTPETQISYVSM
QPWALIDAVDSGVSVKGSHSSKVTAVVQCLLNIRKSEPDAKTLVFSTWTDVLDVIGKALE
ENSITYTTLHSVGNVQRRNLSLFKEKQELSVLLLPYHSGANGLNLIEATXAILVEPILNP
AQEAQAIGRIHRIGQTRKTKIHRFFIRRTIEERIHTLVESTLRPAAISAEKAPAVIDDTM
TIGQLISLFQDTRRDDHGDDEDMNDIEQTGNVDQRAASSDVSNMETISGHRSDV
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaagaaaacaaaccacacctacgcagatgagggaggagaagcggcagcaactt
cagtggaatatgctggatggaaataatggtgatgcaagcagttttaattctactggatct
ctcctgattattcctgatgatgatcctattcttcatcaagaagaagaagcagccattttc
tctcttgaaagcaatagtgcaaataattcttgcactcaacaatctgacttgaaacaactt
aattttgcaaagacaaatttttcaccgaataattattgccctgtattttccaaagaagtg
tatgatttttttcaaagtccccaatcaattattttgtttaaacaactccttgaagactgt
attttgtgtattacaatccatagcagcataacagctaaagatgaggagtggcattttgag
attggcaggttcagctttaagctccagcctcacccttgttttcaagcaaacactgttaat
cttcctggcagtagtttgtgctggttgtatatttcacatgtacaaggaagacacatgatt
tattttgaagacagttatggatctaataatgagtctatacagatgttttggcatctggag
ctgaatgttgataatgtattagaactgtttgaggggctggagaccaaacactttcagttg
gtccgtggaagatatgacagtatgaaaagggagcaagaagtgattatctatggccgagag
agcatagtgatggccttgtcatatcctagtgaagcattccgtttgaaacctgtacataag
gcactaaagaaattgatgtgtcatttccataatattggtcctctttatgatctgagcagc
agactgagaacagaacagcatgattttcaccagctgtatgaagctgtcatgagcatccag
cagtctacaaaaatgaaggctactatagatgtacagcatcctgatctcaagcctttgctg
aggccataccagcgtgatgctgttgtttggatgttgcatcaagagtgttttctacccaag
gtttcattggatgacccagaatctttatgtgacttacatccgttgtacgttgaaatgaag
acatcatgtggtaaaaccttttattacaacaggcatggtggcagcattgtgaagcaaaga
ccatcaaagaccaaaacacccccaaggggtatacttgctgatgaaatgggactaggtaaa
actgtggaggtactttgccttatacttctgcaccagcgtccacctcttccaccaccctct
caactacccactcttgctgagacccagttagaggacaaaggccctgaaaaggaaacaact
gaaaatgatgggcaagaagaatggtgtagcacaactgttgtgactgcacttgaagctgtc
acacaagtgtcacagacagaagaaacatttccagattcacctgtatcttctgggaaacag
gcaaaagagttaaatgcagagggtgctggcagctatcacactgttcaaacgtcaagcagt
attccacatatttctgagatgcagagagatatgatttcttctgctccaatcatttttgaa
aaatccgaatcgaatcatgacatatctctctcaatgagcagtaagacaacaaaagatata
aacattgacgccatggagattaaacagatttctgggcaagacagcactgaaagtgaaaaa
tgcaacacaccaaataatggcatgtcaccgttgactgctacttcttcaggcaagctacag
cagcatcgtaaactcatccaacagacagacagtttggctaacagttgcattgagcgaaag
cagctgtttgaatgtgtgtgtggaaagagcaaaaatgagactaactctacacggaaaaaa
attaagaaagctcttcatgttgtagagtgtgtagactgtggtgcacagcagcatgctgaa
tgcttaaattatgatcttgctgatgccttccgtggacagtacaagtgtccacattgccat
gtggcttctacaccacttccatctggagcaacattgatcatatcgccatctcaaatttgt
gatcagtgggtggaagaaataatgaagcacattcaagtcaaaagtctgaatgtatttgta
taccaaggtgtgaacagacagggttttgttcagccacgcatgcttgcttcacaggatata
gttgtgaccacgtatgaaacgctttgcaaggagcttgattatgtggatcttccacacaca
aacagtaagaatgggcgaagattccgccatccaaagcgtttcatggctatcccaagtcca
ttggtggctgtggaatggtggagagtatgccttgatgaggctcagatggtggaatgtgtt
acagcaaagactgcagagatggccctaagactgacagctatcaataggtggtgtgtaaca
ggaacacctcttattcacagtgtagaagacatatatggtttactactttttcttggactg
gatccatactgtgtgatgcaatggtggcggattttgttgtgggaaccgtattgccatggc
ttccagtatcctttgcaccatgccctgtcaaaggtgttgtggcgcactgctaaaaaggat
gtgattaaccagattttgctacctgagcagactgaacaaatgtgctggttgaccttctca
ccaatagaggatcatttctaccggcgattgtataacaaatgctttgatcaggccatgagg
aatttgtcaggaagaacagatctgtcaacaaagcttaacaccatggattcaggaactttg
aacaagttgctgcaaccactgcttcatctgcgtcaggcctgctgtcatccacaggttgtg
cgaggagctttcatcccaatacatgacagtatgctgaccatggaagagttgttagaatct
ttgatcaagaaaacaaggtacgaatgtgaggaagcccacagggggaaagttgctgccatg
aatgggcttgctgctttgcagatcatccagaaacagccaaaggaggctgtggagctgtat
cgcgaggtactgcagtctgtggaagagtgtaaagcagagctaggcactgacgagctccaa
cagttgcatgcaatgttcaaccttgaagaagttctagccaccaaaccacaaggtgttgct
cccacacttcgtgaccaccagctggctgcccagtgcaaagaggtacagaagaaatatatg
atgaaagcagagacatatgtagccacaagccatgagcagttttcttcttgtgaaaacaca
attcaggaactacaacaagagttggatgaaggcactgactggtggctggaggtgatagac
tgggctgcagagagagagatgggaggagagctagttctgtgggtacgcgataaccttgca
gatcacacttcaccatactttggagcctcaatcctcagctttcgagacacaacaagttta
cagtatataatagatacccagctgcaagggctggagtcagcacgaaattgtctacttcga
gatctcaaaaagctcaacaaaaaagggggcttaactccagacgtcatcaaccagacggtg
gagtgttgccttcgtccttccaatgagattttgaaaagctgccctttttgcaaggttgaa
agtctgctgacaaattacgagtccaaattgttcgcatttaaggaagggtctgtgtttggg
tttcttgatgtggacaatcctacacataaggtcaacactattcgtaggggaacatgggct
gatggtcagactgaactggctttgaagtccatcctatcatttggacgaacaaaaagaatg
caaggtcagagccttcattttggatcagttcatatcaaacttttagatggactgaaaaag
gaatttaagcaattgcgtgtgctatggatggctctgcgtgagcatgtctctgccattgat
gagctcaagatggccactattcgtctgcgcatccgacatccagatgagccacgaactaat
aggacagaagtcaatattctagagccaacagaggttgaggcccataaacaaaagctgatg
acagacaaaattgtcaatcaaggagagttgcagaagaagctggggcagctcatgtatctg
aaaaacctggctaagtcccaacacacagtgtcggaaggcaaaaacccagaaccctgtcct
gtatgccaacataaactaggacataagtggagtgtcttgcggtgtggtcattgctactgt
atggactgcattgacaccttgctgacgcgcttaccccagataggttttcgcaccaaagct
gtcaagtgccctatgtgtcgtgagatgactccagagacacagatctcttatgtcagcatg
cagccatgggccctcattgatgctgttgattctggtgtatctgtgaaaggcagccattcc
agcaaagttactgcagtagtccaatgtcttttgaacatcaggaaatcagagccagatgct
aaaactttggtcttttccacatggacagatgtgttggatgtgattggaaaagctctggaa
gagaacagcattacatatacaactttacatagtgttggaaatgttcagagaaggaacctg
tctttatttaaggagaaacaggagctgtctgtgttgctgttgccctaccactcaggtgct
aatggcttgaatctgattgaagcaacanntgctatattggtggaaccaatcttgaaccca
gcacaggaggcacaggctattggccgcattcataggattggacagaccagaaaaaccaag
attcatcggtttttcattcgtcgaaccattgaagagcgcatccatactttagtagagtca
actttgcgccctgctgcaatatcagccgagaaagccccggctgtgatcgacgacacgatg
acgatcggccagctgatctctctatttcaggatacccgtagggacgatcatggtgatgat
gaagacatgaatgatatcgagcagacgggcaatgttgaccagagagcagcaagcagcgat
gtcagcaacatggagactataagcggtcataggagtgatgtttag
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integrated database retrieval system
