Pomacea canaliculata (golden apple snail): 112565665
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Entry
112565665 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair and recombination protein RAD54B-like
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
112565665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112565665
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
112565665
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
ERCC3_RAD25_C
HasA
DUF2439
Motif
Other DBs
NCBI-GeneID:
112565665
NCBI-ProteinID:
XP_025097073
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All DBs
Position
LG1:33523190..33536468
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AA seq
999 aa
AA seq
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MRRSAAPSQQSTAKRTKFTVPYKHIPNSTINQQMPGRSSRIQNDCLISPSALEEKIVSVP
FSHESTSEFQVPLKPTLEIDKISTKETKPWCQDSLNLEADVNDSKPCEKNSQDSIPTNTS
PNKSTHLYAHGHCNKRSVKLKHSLVPSALKTCFNSPVLVSFKEAKSEGKSHINLKEVKSQ
HSNLDVTDPSAINDSGKKGYFSVVWCKLSKKKHKKWEGDAVLLTHGRSATLYDMDGKEIG
KGAGYKSSELESLKEDESLVIGGKEIQVMGLLSEEQFKSGKCFTGARLARSESANCHDIS
ICLKSTGASRSFTNPLVASHNKENAHSEVKQSTLLPRFDPSAPGALVMPRPDTSHQLQYN
RQRLPLVDVVVDPHLAVHLRPHQRXGVVFLYECISGMRNYSGMGAILADDMGLGKTLQCI
TLIWTLLKQGSYGGRPILKRVIIITPGSLVKNWSQEFRKWLGPERIHVFVVAGENKIQDY
TRTSLCPVMIISYEMFMRGYDIIKHIPFDLMVCDEGHRLKNTTIKTTSLIMSLEIRRRIV
LSGTPIQNDLQEFFSVADFCNPGILGSSVAFRRVYETPIVASQQPNATEEEVVLGEERAS
ELARITRMFVLRRTQEINNKYLPPKVELVLFCRPSFLQQVIYGEILGSSTVRSCLMGHGS
LFGAGAGSLHLQAIAALKQLCNHPALLANKIKTASVKEQQDSIYANLREHYEGEQESCLQ
LKPMDSGKLAILAELLKTMFTLYPGEKIVLVSNHTKTLDMLQQFCCSIGYTFVRLDGQTP
TAQRQDIVTRFNNNYGQESIFLLSSKAGGVGLNLVGASRLVLYDIDWNPANDLQAMARVW
RDGQKKKVFIYRLLTAGSIEEKIYQRQISKQGLSGTVIDFKPAEIQFSQEDLKDLFSFNT
STECDTHSLLDCLCKGEGSTLRDNMNTVQISSEHQQKHLSGTSAELYMARNLSMSQLLDW
KHLKGSSTQIQKEWCLGDTTNIPLSFLFWNETHSKSIPS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcgatcggcagcaccaagtcagcagagtactgcaaaaaggactaaatttacagtc
ccatacaagcacatcccaaacagcacaataaatcaacaaatgcctggaagaagtagtaga
attcaaaatgactgcttgatatcgccatctgctctggaagaaaaaattgtctctgtgcct
ttttctcatgaatctacttcagaatttcaagttccattaaagcctactcttgagatagac
aaaatttctactaaagaaacaaaaccttggtgtcaggacagtttaaacttggaggcagac
gttaatgacagcaaaccatgtgaaaagaattcccaagacagcatacctacaaatacttca
ccaaacaaatctacacatctttatgcacatgggcattgtaacaaaagaagtgtgaagcta
aaacatagcttggtgccatcagcattaaaaacatgcttcaattcgccagtcttggtttct
tttaaagaagcaaagtctgagggaaaaagtcacataaacttgaaagaagtaaagtctcaa
cactcaaacctagatgttacagatccaagtgctataaatgattctgggaaaaaaggatat
ttttctgttgtctggtgtaaattatcaaaaaagaagcacaagaaatgggaaggagatgca
gttttacttacccatggtcgatctgcaactttgtatgacatggatgggaaagaaattggt
aaaggtgctggatataaatcatcagaactggaatctctcaaagaagatgagtctcttgtg
attggtggtaaagaaatccaggtgatgggcctactaagtgaggaacaattcaagtctggg
aaatgctttacaggggcaagactagcaagatcggagtcagcaaattgtcatgacatatca
atatgtttaaagtcaacaggagcatcaagatcttttacaaatccacttgtggcttctcat
aataaagaaaatgcacattcagaagtgaaacagtctacattgctgcctcgatttgatcca
tcagctcctggtgctttggtaatgccacgccctgacacatcacatcaactacagtacaac
aggcaacggctgcctttggttgatgtagtagtggatccacacttagctgttcatcttcgt
ccacaccagcganaaggtgttgtctttctgtatgagtgtatctcaggcatgcgcaattat
tctggcatgggagctattttggcggatgatatggggcttggaaagactcttcagtgcata
actctgatatggacccttttgaagcaaggatcttatgggggcaggcctattttaaaaaga
gtaattatcatcacgcctggaagtctagtgaagaactggtctcaagagtttcgcaagtgg
cttggtccagagagaatacatgtttttgtagtagcaggagaaaataagattcaggattac
accagaacaagcctatgtccagtgatgatcatatcatatgagatgttcatgagaggttat
gatatcatcaaacatataccttttgacctcatggtgtgtgatgaaggtcatcgcttgaag
aataccaccatcaaaactacatctctgatcatgagcctggaaatacgacgcaggatagtc
ttgtccggaacccctattcagaatgacttgcaggagtttttctctgtggctgacttctgc
aatccaggaatcttgggatcaagtgtagctttccggcgtgtgtacgaaaccccaatcgtg
gcctcccaacagcctaatgccactgaagaagaggtggtgcttggtgaagaaagagctagt
gaactggctagaataacacgaatgtttgttctccgacgcacacaagagatcaataacaag
taccttcctccaaaagtggagttagtgctgttttgccgtcctagctttctgcagcaggtg
atatatggcgagatcctaggcagtagcaccgtaaggtcatgccttatgggtcatgggtca
ttgtttggagcaggagcaggatccttacatctccaggctattgctgctctcaaacaactt
tgcaaccacccagctctgctagctaataagatcaagacagcaagtgtaaaggaacagcag
gacagcatttatgcaaatctaagagaacattatgagggggaacaagagagctgcttacag
ttaaagccaatggattcagggaaacttgccattttagcagagctgcttaagaccatgttc
actttgtaccctggagagaaaattgtgctggtctccaaccatacgaagactttagatatg
ctacagcagttctgctgtagcattggttatacctttgtccgacttgatggtcagactcct
acagcacagcgtcaggatatagtcacccgcttcaacaataactatggacaggaaagcatt
ttcctgttgagttcgaaggcaggaggtgtaggcctgaatcttgtgggcgcatctcgcctt
gtactatatgacattgactggaatccagccaatgacctgcaggcgatggctcgtgtttgg
cgagatggacaaaagaagaaggtctttatttacagacttttgaccgcaggtagcatagag
gaaaagatttatcagcgacaaatcagcaaacaaggcctgagtggcactgttatagacttc
aaacctgcagaaattcagttctcacaagaagatcttaaagatctcttttctttcaacact
agtacagaatgcgacactcactcacttttggactgcctgtgtaaaggagagggttccacc
ttaagggataatatgaacactgttcagatttcttcagagcatcagcaaaaacatttgtct
ggaacttcagctgaactgtatatggcaaggaatttgtctatgtctcaactattagattgg
aagcatttaaaaggctcaagcacccaaatccagaaggaatggtgtttgggggacacaaca
aacatccctctttcatttctgttctggaatgaaactcattcaaagagtattccttcttga
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