Pomacea canaliculata (golden apple snail): 112565917
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Entry
112565917 CDS
T05881
Name
(RefSeq) serine/arginine repetitive matrix protein 1-like isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112565917
03015 mRNA surveillance pathway
112565917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112565917
03041 Spliceosome [BR:
pcan03041
]
112565917
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112565917
Spliceosome [BR:
pcan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
112565917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
GvpD_P-loop
Motif
Other DBs
NCBI-GeneID:
112565917
NCBI-ProteinID:
XP_025097585
LinkDB
All DBs
Position
LG6:26008187..26026725
Genome browser
AA seq
1060 aa
AA seq
DB search
MADAGFFKGTTAEQDNRFADKKKKLMKSMKFAEGIDRKVDMSKVNVDSLKPWIAQRITEL
LCIEDDVIVEFVYNQLEARYPDPRDMQINLTGFLNAKNARTFMTEMWELLCSAQDNVTGI
PTKFLEQKKEEIKKRQAEQERIQATLKKHEEQIKETLNRERKEAERQNRTPDRKRNRSRT
RSRSRTRTPEKEKEKDKEKSSAADPATKTPDSPVLPGPQSIKQNPNTASVDENIKTSEAD
IKEKNLKNEEAAQNADGEVKEEKSRSREDKDKKDNKRSRSRSRSPRHKKRDRSRSKSSDR
RRRGRSKSRSRSRRRSRSPRRSSPRRRSRSPRRRRVSPRRDRRSPRRSPRRSPPRRRRYS
SSGDESSDSTPEKKKMGSKRKNSEGDAGDARATSPEKQGIQQRRNYRGHADDDVASSSGS
SSEEEAPRSGRIHGERDRSASDTRRRRSPSPFRRRRPIVSPRRRSLSPRRRSPPPRRPRR
PSPMRQQMTRNPPPRFLAFRDTRQKGRSSYMESPMPGRHRPSSSASPAPRRPSPPPRQRA
ASPVRSRRHSTSASPPRPRKLSSASPADDASSSSGSESGSVSPERTGKVRKGSISSPEKS
IKHKKRDSSSSSSSGSESPPTFKKPGPLAARSRQRSASPDEGHRRQRNSFASTMPAPYRQ
RPSNSPVERRVKRPSTPDNIRQQRSPERRRETSPSPVADRRGNKRASSDDRPSARHASPP
DRGSGRRPSPSDRGSGRRTSPDDKESIRRDRDRRQQSPPPAVKERRMSSSSPPPQRVSHT
SMSPEEPRRADKRSRQREEQSSPPGRRTSSPEGQRKGKRKSRPSHSPDEKRFKRASSDSD
SSVESEKFDKRGKPSIVRQVSGDSRGSESPKKVPKKRSYSSSSSDEPQKPVTPSRGEEEK
SKVIKRSSYSSSPEGRLPGDGSEGHRRLFVVKREDKEKSAATAAAKVEHISPIRNGSSSR
LAKVEASKSASDSEGSDSDAASKKKKKKNKKHKKHKKHKKHKQKKSVKDEEEGSEEESLE
ELERQLREKALRSMRAKAAMSVPSGSEHAKTSTDKADSGD
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccggatttttcaagggaactaccgcagagcaagataatcgttttgctgat
aagaaaaagaaactaatgaagtctatgaaatttgctgaaggcatagacaggaaggtggac
atgtcaaaggtgaatgtggacagcctaaaaccctggattgctcaacgcatcactgaactt
ctatgcattgaggatgatgtcatcgtcgaatttgtctacaaccagttagaagccaggtat
ccagatccccgagacatgcagattaatttgactggcttcctgaacgccaagaatgctcgc
acctttatgacagaaatgtgggaactgttgtgcagtgcgcaggacaacgtgactggcatt
cctaccaagtttcttgagcagaagaaagaggagataaagaagagacaggctgaacaagaa
cgaatccaggcaacgctaaaaaaacatgaagagcagataaaagaaactttaaatcgtgaa
agaaaagaagcagaacgacagaacagaacaccagacagaaagagaaatcgttcgaggacc
aggagcagaagtaggactaggacccctgagaaagaaaaggagaaagacaaagaaaaatct
agtgctgctgatccagcaacaaaaacgcctgattcacctgtgttgccggggccacagtcc
ataaagcagaaccccaacacagcatctgtggatgagaacataaaaaccagcgaggcagat
atcaaggaaaaaaatttgaagaatgaagaagctgcacagaatgcagatggtgaagtgaag
gaagaaaaatccagatccagagaagacaaagacaagaaagataataagcgaagccgatca
aggtcaagatccccacgtcacaaaaaacgtgacaggtctaggtcaaagagctctgacaga
aggcggcgtggtcgcagtaagtcgagatctcgctctcgaagaagatctcgatcacccagg
cgcagttctcctcgtcgcaggtctcgcagccctcgtcgtaggcgtgtttcacctcgacga
gatagacgatcaccacgcaggtcaccaagaagatctccaccaagaagacgtagatattct
agtagtggagatgaatccagtgactctacacctgagaaaaagaagatgggcagcaaaaga
aagaattcagagggagatgctggtgatgcaagagcaacttctccagagaaacaaggaatc
cagcaacgccgcaactatcgaggtcatgctgatgatgatgttgcctcatcttcagggtca
tcttctgaagaagaagcccctcgttctggaagaatacatggtgaacgagacagatcagca
tcagatactcgccgccgccgaagcccctcacccttcagaagacgcagacccattgtttct
cctcgcagacgctctctgtctccacgacgacgatcaccaccaccacgcagacccaggcgg
cccagcccaatgcgtcagcaaatgactcgaaatccaccacccagatttcttgctttcaga
gatacaagacagaaagggaggtcttcatatatggaatctcccatgcctggtcgacaccga
ccatcatcttcagcttctccagcgccacgccgccccagtcctcccccccgccaaagagct
gcttcacctgtgcggtctcgtcgtcactccacttctgcctcaccacccagacctcgtaag
ctgtcatcagcatcgcctgctgatgatgcctcctcttcttctggatcagaatcaggatcc
gtatcacctgaacggacaggcaaagtacggaaggggtccatctcatcacctgagaaatca
atcaagcataaaaagcgtgactcttcatcttcatcttcctcaggttcagagtcgccacct
acattcaaaaagccaggaccactggctgctcgatctcgacagcgttctgcatcaccagat
gaaggtcatcgcaggcagagaaattcttttgcttctaccatgccagctccttaccgacag
cgcccctctaattctccagtagaaagacgtgtcaagagaccatccacgcctgataacatt
aggcagcagagaagccctgagcgacggcgagaaacttctcccagccctgtggcagacagg
agaggcaataaacgtgctagttctgacgacagacccagtgctaggcatgcaagtcctcct
gatagaggttcaggaaggcgaccaagcccaagtgatagaggcagtggaagacgcactagt
cctgatgataaagaaagcataagacgagacagagatcgcagacagcagtcgcctcctcct
gcagtgaaagaaaggcgcatgtcatcatcttcccctccaccacagcgtgtttcacatacc
tccatgtcaccagaagaacctcgtcgtgctgacaagagaagtcggcagagagaggagcag
agttctccaccagggaggagaacatcttcccctgagggtcagcgcaagggaaagagaaag
tcacggccatcacactcacctgatgagaaaagatttaagcgggcatcatccgattccgat
tctagtgtggagagtgagaaatttgataaaagaggaaaacccagcattgtcagacaggtg
tctggggattcaagagggagtgagtcgccaaaaaaggtgcccaagaaacgatcatattcc
tccagcagttcagatgagccacaaaagccagttactcctagcaggggagaagaggagaaa
agtaaggtgataaaacgttccagttactcctccagtccagaaggtaggctgccaggagat
gggagtgaaggtcaccggcgcttgtttgtggtgaagcgggaagataaggaaaagagtgct
gcaacagctgcagcgaaagttgaacacatcagccctatcagaaatgggagctcttcaaga
ctggcaaaggtggaagcttctaagtctgccagtgattctgagggctcggactctgatgca
gcttcaaaaaaaaagaagaaaaagaacaagaagcacaaaaaacacaagaagcacaagaaa
cacaagcaaaagaaatctgtaaaagatgaggaagagggttctgaagaagagagtctagag
gagcttgagcgacagttgcgggaaaaggcactgaggtccatgagagccaaggcagccatg
tccgtcccctccggcagcgaacatgcgaaaacgtcgacagacaaggcagattctggcgac
taa
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