Pomacea canaliculata (golden apple snail): 112565994
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Entry
112565994 CDS
T05881
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112565994
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
112565994
3'-5' decay
Other 3'-5' decay factors
112565994
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ResIII
AAA_30
zf-CCCH
AAA_19
PAM2
AAA_22
zf-C2H2_jaz
zf-CCCH_4
UvrD-helicase
PhoH
AAA_16
TPR_P4H
DUF4187
zf-CCCH_2
Helicase_RecD
AAA_24
SRP54
Motif
Other DBs
NCBI-GeneID:
112565994
NCBI-ProteinID:
XP_025097698
LinkDB
All DBs
Position
LG1:complement(39385541..39411623)
Genome browser
AA seq
1677 aa
AA seq
DB search
MQKHWPNVIKHLKKTPNNEKILEKKIKVFCHLGNLQSAFALVSDWVKQNPEHPVAKREFK
RLETVMAVLQDENSDDDDKPALGATSCQKPSSTPPQTPPEVEAVKPVPKNTVRVLPPQPP
RNTTKHNNEESLLYFCSFCDVRFARQEELDTHCHSDQHKNHLASDESHGWTYRPPPRGQT
SEEYALCQRYQTSRCPFGDKCTQAHSEAELEEWQERLAFRKQQLQKARDNQLHGNTFTER
LLEKLTNPEGPKVGLVQSLEFVKIHVNSDLKVNMTTKKCTNAWTFTVTSKVCLHGVALLD
DVNRSYFHISSISVGPKKTQKYQNLETHCQEWINQDAVSKSQDNINKSQGEYVYRVKIVF
KTDIYGTFRQSVIFDFGLDAIVVRETQVESAPVTDPEKLSKDLVLSTANRWTHDDVTVVP
FTPKLVSYLDKEEQLLSKYILPHADRLSLLETLTQPLSKDNYRLWMHEMLYLEELAELAF
IQRFNVSASLQLVNRFLLMPGALSSAKYTREGELFARLKLEDVLSEDSMAGRLILQNAQI
AWVAPAVDTSDGNKEMRKVYEAMIEDKGKNFVFLRLSSTCVSDLKLTCDEDFVAQIQFQL
NRLPKCEMHAAVDGLSTLDIVFPDTTKIVNVSAPDEKVITSLEDMPLNAQQKEAILNITA
LGSGNRPPLLIIGPFGTGKTYTLAQAAKLVLQQEGTRVLICTHSNSAADLYIKDFFHPFV
EAGQTELRPLRIYYHLRWMQTVPEVILQYSLFQREGPAAGTFGMPTTEDIMKHRVIITTL
STARYINDLSLSRGFFTHIFIDEAAQALECETLIPLSLANEDTCIVLAGDHMQISPEVYS
PFTQQQGFHLSFLERLYDMYPTQCPWKVMLCENYRSHAAIVDFTSELFYDHQLIASGKQI
PHPTLYPLSFFAAMGEEVQHENNTGFYNLSEMYEVVDRVDDLVKKWPEEWGELNGNSISV
VSPYMDQVIRIRGELRKRKIYNVSVERVLNVQGKQYRVIIISVVRTRRSCRSSGGAEEEF
MDYGFLSNVKLLNTAITRAQSLVLVVADPVSLCLVGKCRKVWEYFLEVCQQNNSLFGITW
NQLRSQLDRAEVAKNYVLNPLAPEFVPNRLFHITRQSAEAAAAAAYLPQAPLWHYMGPQH
LQYSHGAPYQMYPQMMPYFSMPMYTPYVGPVLMRPPAGGGLWGHHKGGVPRANVPHLAAQ
RAESIRMVDFRPSYKPSRGRMTAYPFSRLPLSYPLPTMYPIYPNNHPSHQGYYLLPDDLR
LAALQQQYSFPYNHQPIIRPPLGGPHTHLHGPVYHGIPLHSPFGSGQHGLASPSDRGDEG
VEARGSPDTRLNTGNSSSPIPAFQVLPNVKHVPPHLRPGLNPPSQNSSRSSTPVNQVPMP
SIPGLAPGPLPEGRGTPVSERPYSPANYGVGRSSTPLSAEEASQDVKDRGLPNFAKSAAT
SNLVSDIMTGTGNRPVKALSEEGAAETYAEVSANQNNYTAATPASASLKNKRDTKQLRLQ
TTGFSRQFSDDLPTPTAITDIVRMIEENIEEGTESSENTPSPSAVPQRIHFVSLHNGRNA
ALSSLQLDLTAAQQLQHQQHNQPGSANSQPSSSDSSSPASKNEERPTYAGVVQKMPPSPG
TLVPDISQMEPQTPRTPSGFMTPGGDMDLDPFGILKSLNIEATNAEQRRIHGGNSLQ
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagcattggccgaatgtgataaagcacttgaagaagacccccaacaatgaaaag
atcctggagaaaaaaatcaaagtcttctgtcatcttggcaatcttcagtcagcatttgct
ctggtgtcagattgggtaaagcaaaatccagagcatcctgttgccaaaagggagttcaaa
agacttgaaacagtgatggccgtcttgcaagatgagaattcagatgatgatgacaaacca
gctcttggtgctaccagctgtcagaagccatcttccacccctccgcaaactcctcctgag
gtagaggcagtgaaaccagttcccaaaaacactgtcagggttcttccacctcagccacca
cgcaacaccaccaagcacaacaatgaagaaagtcttctgtacttctgctcattctgtgat
gtccgatttgcacgtcaagaggaactagacacccattgccacagtgatcagcataaaaac
catctggcatcagatgagagccatggctggacatacagacctccaccacgtggccagaca
agtgaagaatatgcactctgtcagaggtatcagacttccagatgtccatttggggacaag
tgcactcaagctcactcagaggctgagctggaggagtggcaggaacggcttgctttccgc
aagcagcagcttcagaaggctcgggacaaccagctgcatggcaacacattcactgagcga
ctgttggaaaagctaacaaacccagagggaccaaaagttggtttggtgcaaagtctagaa
tttgtcaagatccatgtgaactcagacctgaaagtcaacatgacaactaagaagtgtact
aatgcatggacttttactgtaacaagcaaggtttgccttcatggtgtagcccttctggat
gatgtgaatcgctcttattttcacatctcaagcatctctgttggacctaaaaagacacaa
aaataccagaatctagagacacactgccaggagtggatcaaccaggatgctgtcagtaaa
agtcaagataatatcaacaaaagtcaaggggaatatgtttacagggtcaagattgtcttt
aagacagacatctatggaacttttcgccagtcagtaatatttgactttgggctggatgcc
atagttgtacgagagactcaggtcgagtcagcacctgttactgatcctgaaaagctaagc
aaagatttggttctcagtactgccaatcggtggactcatgatgatgttaccgttgtacca
tttacacccaaattggtgtcttacttggacaaagaagagcagcttttgtcaaaatatatc
cttcctcatgcagaccgcctgtctttactagaaactctcacacagccactcagcaaagat
aactacagactgtggatgcatgaaatgctgtacctggaggagctagcagaactagccttt
atccaaagattcaatgtgtcagcatccttgcaactagtgaatcgcttccttctcatgccg
ggggccttgtcctcagccaagtacacccgtgagggggagttgtttgctcggctgaagctg
gaagatgtgctgtcagaggactcaatggctggccgccttatcttgcagaatgcacagata
gcatgggtagcaccagcagttgacacaagtgatggaaataaagagatgaggaaggtgtat
gaagctatgattgaagacaagggaaagaactttgtctttctgcgcctgtcgagtacctgt
gtgtctgatctcaaactgacctgtgatgaagactttgttgctcagattcagttccagctg
aatcgcttgcccaagtgtgaaatgcatgctgctgttgatggcctatctactcttgacatt
gtatttccagacactacaaaaattgtaaatgtgtcagccccagatgaaaaagtgatcaca
agcttagaagatatgccacttaatgcccaacagaaggaagccattctcaacatcactgct
ctgggaagtggaaatcggcctccgctgctcattataggaccgtttgggacaggcaaaact
tataccttggctcaagctgcaaagctggtgctgcagcaagagggaacccgtgttctcatc
tgtactcattcaaacagtgctgctgacctgtacattaaagatttcttccacccattcgtg
gaggctgggcagacagaacttcggccactgagaatctactatcaccttcgctggatgcaa
acagttccagaggttattttgcagtacagtttgtttcaaagggaaggaccagctgcagga
acatttggaatgccaacaacagaagatatcatgaagcatagggtaatcataacaacactt
tccactgcccgctacatcaacgacctttccctttctcgtggatttttcacacacatcttt
atcgatgaggcagcccaggctctagagtgtgagaccttgattcctttaagtctggcaaat
gaggacacctgcattgttttagctggggatcacatgcagataagtccagaagtgtactca
ccatttacccaacagcagggatttcatctttctttcttggaacgcctgtatgacatgtac
cctacacaatgtccatggaaggtgatgctctgcgagaactaccgttcccatgcagctatt
gtagactttacctctgagctcttctatgaccaccagctgattgccagtggcaagcaaata
cctcatcccaccctgtatccactgtccttctttgctgcaatgggagaagaagtgcagcat
gaaaacaatactggcttctacaatttgtcagagatgtatgaagtagtggaccgagtggat
gatcttgtcaagaaatggcctgaggagtggggggagcttaatggcaacagtatcagtgtt
gtttccccctacatggatcaggttatccgcattcgtggggagttacgcaagcgcaagatt
tacaatgtctcagtagagcgtgtccttaatgtgcaaggcaagcagtatcgagtgatcatc
ataagtgtagtgcgtaccaggcgttcatgccgctccagtggtggtgcagaggaagagttc
atggactatggattcctctcaaatgtgaaactactgaatactgcaatcacccgagctcag
tcacttgttcttgttgtagcagatcctgtctcactttgtcttgtcggcaaatgcagaaaa
gtatgggagtatttcttggaggtgtgccagcaaaacaacagtctctttgggattacctgg
aatcagttgcgatctcagcttgaccgtgctgaggtggccaaaaactatgtccttaaccca
ctggccccagagtttgtgcctaatcgcctcttccacatcactcgtcagagcgccgaggca
gcagctgcagcagcgtacttgcctcaagccccactctggcactacatggggccacagcat
ctccagtactctcatggggctccttaccagatgtacccacagatgatgccatatttttcc
atgcctatgtacactccctatgtgggtccagttctgatgaggcctccggcaggtggggga
ttatggggccaccacaagggaggtgttcctcgtgctaatgtacctcacctggcagcccaa
cgagcagaaagtatccgcatggtagattttcgaccatcctacaagccatcacgtggtcgg
atgactgcgtatcctttctctcgcttacccttgagctacccacttcccacgatgtatcct
atatatcctaacaaccatccttcacaccaaggctattatctactgcctgatgatcttcga
ttagctgccctccagcaacagtacagttttccttataatcatcagccgatcatccgtcct
cccctgggaggaccacacacgcatttgcatggccctgtctaccatggcattccacttcat
tctccatttggcagtggacagcatggtctggccagtcctagtgaccgaggtgatgaaggt
gtggaggcccgcggctccccagacaccagacttaacactggcaactccagtagtcccatt
ccggcttttcaagtgctaccgaatgtcaagcatgttccacctcatctgcgaccaggtttg
aatccacctagccagaactcttctcgttccagcacacctgtgaaccaggtccccatgcct
tccattccaggcctggcaccagggcccctaccagaaggtcgaggcactcctgtgtcagag
cgaccatacagccctgccaattacggtgttggccgcagttccacacccctcagcgctgaa
gaagcatcacaagatgtcaaagacaggggcctaccaaactttgccaaaagtgctgctacc
agcaacttggtatcagatattatgacaggcacaggtaacaggcctgttaaggcattgtct
gaggaaggtgcagctgaaacatatgctgaggtatctgcaaatcaaaacaactacactgct
gccacacctgcttctgcttctctcaaaaacaagagggatacaaagcagctgcgcctgcag
acaactggctttagccgccagttcagcgacgacttgccgacaccaacagccataacagac
attgttcgcatgatcgaagaaaacattgaggagggcacggaaagctctgagaatacacct
tccccatccgctgtcccccagagaatccattttgtttcactccacaatggacgtaatgca
gctctgagttctctgcaacttgacttgacggctgcacagcaactgcagcaccagcagcat
aatcaaccaggcagcgccaactcacagccttcctcttctgactcatcgtcacctgccagc
aagaatgaggagcgcccaacttacgctggggttgtccaaaagatgccaccatcaccaggc
accctggtgcctgacatcagccagatggagccacagacaccacgcacaccatctggcttc
atgacaccaggtggtgacatggatttggatccatttgggatccttaagagtcttaatatt
gaagctacaaatgctgagcagcgccgcattcatgggggaaattctttgcagtga
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integrated database retrieval system
