Pomacea canaliculata (golden apple snail): 112565995
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Entry
112565995 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIE subunit 1-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112565995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112565995
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
112565995
Prokaryotic type
Archaeal type
TFE
112565995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
WHD_POLR3C
Zf-C2H2_ZNF451_C
zf-H2C2_2
Zn_ribbon_8
DUF5635
SgrR_N
Motif
Other DBs
NCBI-GeneID:
112565995
NCBI-ProteinID:
XP_025097696
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All DBs
Position
LG6:complement(11723137..11728854)
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AA seq
397 aa
AA seq
DB search
MDTEVLTEVPVVLKKLVRMIARGFYTMEHAIVVDLLVKHPCIKEDDLADLLKYEKKHLRS
LLNTLKNEKFLKSRMRVETDEEGRTTRHSYYFISYNVFVNVVKYKLDHIRKKIELEERTT
SSRANFKCQACGKTFTDFEIGQLLDYTTKQLVCTFCEEEVLEDESSLPRADARTSLARFN
SQVKPIFDLLQECEEIRLAPDLLEPEPTDFKKMQKNPTGPQQRTKGENGIWSGDASRNIE
FGYSDXQFTITVDDDVDKMAVEKKEVPIWMQKSTVDGVPMLDGLDSPSRLISSTMVPSED
IMQTLLVHEPKAGSSRLPDNESSDESERDGFGAGTAPAGDDEEMESNEEDEAVPIVTIGD
KRVPYHDVTEDMVALMTPLEKEEYIRIGQEIYENMYE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaagtcctaaccgaagtgcctgtggtcttaaaaaagttggtgcggatgata
gctagaggattttacactatggagcatgccatagttgttgacttgcttgtgaagcatcca
tgtatcaaggaggatgatttggctgacctgctcaaatatgagaaaaaacatctacgttct
ttactaaacacattgaaaaatgaaaaatttcttaagagtcggatgcgagtggaaacagat
gaagaaggtcgaacaacacgacatagctattatttcattagttacaatgtttttgtcaat
gtagtaaagtacaagcttgaccacatacgcaaaaaaattgaactggaggagcgcaccacc
agcagtagagcaaatttcaaatgtcaagcatgtggaaaaacctttacagactttgaaata
gggcagctccttgactacacgacaaagcaacttgtatgtacattttgtgaagaggaagta
ttggaggatgaaagttctctcccaagagcggacgcacgcacttctctggctcgattcaac
agtcaagtcaaacccatctttgatttgctgcaagaatgtgaagaaatcagacttgctcca
gatttgttggagcctgagccaacagattttaagaaaatgcaaaaaaatccaactggacca
caacaaagaacaaaaggtgaaaatggcatatggagtggagatgcatcgcggaatattgaa
tttggttatagtgacnaccagtttactatcacagtagatgatgacgtagataaaatggca
gtagaaaagaaggaagttccaatctggatgcaaaagagtactgtagatggtgtcccaatg
ctggatgggcttgacagccctagtcgtttgatttcaagcacgatggtgcctagtgaggac
atcatgcagacattgctagtgcacgagcccaaagcagggtcatcgcgattgcctgataat
gagtccagtgatgaatcagagagagatggatttggtgcagggactgctccagcaggtgat
gatgaagaaatggagagcaatgaggaagatgaggctgttcccatagttaccattggtgac
aagcgagtaccataccatgatgtcacagaagatatggtggctcttatgactccactagaa
aaagaggagtacatcagaataggacaagaaatctatgagaacatgtatgagtga
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