Pomacea canaliculata (golden apple snail): 112566662
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Entry
112566662 CDS
T05881
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112566662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112566662
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
112566662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
OB_NTP_bind
Motif
Other DBs
NCBI-GeneID:
112566662
NCBI-ProteinID:
XP_025098744
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All DBs
Position
LG6:complement(6029273..6046191)
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AA seq
932 aa
AA seq
DB search
MALQPKQDLSLDNLGQDQGFFSFYKGLQEKPSTTLRVFDRGDYYTVHGQDAAFVAKEVFK
TTGVIKYLGSGSSKLESVALSKMNFESLVRDLLLVRQYRVEVFKNKGSAKAPDWFLAFKA
SPGNLTQFEDILFGNADMSQSVGVIGVKIASGDGQRIVGVGYADAILRKFTVSEFAENDQ
FSNLEALIVQLGPKEAIIATGDANPDVVKLKQVLERSGLLITERKKGDFTNKDVVQDLNR
LLRFKNGGQPNSATLSELDKTHGVSALSAVIKYLELLSDEGNFGQFSLSSFDLAQYMKLD
AAAVRALNLLPSPNESGNKNQSILGLLNKCRTAQGQRLLAQWVKQPLMDINKIEERLNIV
SVMLDDAGLRQTLQEEHLRRLPDFQRIAKKFQRHRATLQDCYRVYQAIDKMPYLLEALNG
HSGKHASLLMEMFGNPVKELLLDFSKFQEMVEATLDMSMVEQHEFVVKPDFDENLAVLRE
KITELEDSIKSQLNRVARDLGLEPNKTVKLENNSQLGFYFRVTRKEEKVLRNNKNYHTID
TNKNGVRFHNSSVRQYNEEYLQAKEEYNEQQKTVVTEIINIASGYAEPMLMLNDLIAQLD
VLVSFGHVSASAPIPYVRPTILPQGSGILTLTEARHPCLEMQDDVSFIPNNASFHKDKHM
FHIITGPNMGGKSTYIRSVGAIVLMAQLGCYVPCSEAGVSVVDCILARVGAGDSQLKGVS
TFMAEMLETASILRSASKDSLIIIDELGRGTSTYDGFGLAWAISEYIVKKIGCFCMFATH
FHELTALADSLSSVNNLHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVIEF
ARQKARELEDYQSLSLTGTGLEGEDEPAVKKRKIAKQEGEVIIKGFLSRAKELAASNLSA
EELMAELQKMKAEVKSKKNPYVEDVLSRKAVV
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcattgcaacctaagcaggacttgtcgttagacaatctgggtcaagaccagggattt
ttcagcttctacaaagggcttcaagagaaaccgagtactacattgcgagtttttgaccga
ggtgactactacactgttcatgggcaagatgctgcctttgttgctaaggaagtctttaag
acaactggtgttatcaagtatcttgggtcaggaagcagcaagcttgaatcagttgcctta
agcaaaatgaactttgagtctctggttcgagatttgctcttggtgcgtcagtacagagta
gaagtcttcaaaaacaaaggatccgccaaagcaccagactggtttttggcctttaaggca
tccccaggtaatctgacccagtttgaagatattctttttggcaatgcagacatgtcacag
tcagtgggtgttataggagtgaagattgcttcaggagatggccagaggattgtgggagtt
gggtatgcagatgccatactaagaaaatttacagtcagtgaatttgcagagaacgaccag
ttttccaatctagaggctttgatagttcagttaggaccaaaggaagcaatcattgcaaca
ggagatgcaaatcctgatgtagtgaaactaaagcaagttctggaaaggagtggcctgctt
atcacagaacgcaagaaaggggacttcactaataaggatgttgttcaagatctcaatcga
ctgcttcgatttaaaaatggaggccagccaaacagcgctactctttcggaattggataaa
actcatggagtatcagcactgtctgctgtgatcaagtatttggagctgctttcagatgaa
gggaactttggacagttttcattatcatcgttcgaccttgctcagtacatgaagctggat
gccgcagctgtgcgtgcacttaatcttttgcccagtcccaatgaaagtggaaacaaaaac
caaagtattctaggactactaaataaatgtcggactgctcaaggacaacgactcttggct
cagtgggttaagcaaccattaatggatatcaacaaaatagaggagcgtctcaatatagtt
tcagtcatgttggatgatgctggactgaggcagacgcttcaggaggaacatttgcgtcgt
ttgcctgattttcagagaattgctaagaagttccagcgacaccgagctacactgcaggat
tgctatcgtgtataccaagccattgacaagatgccttacctgcttgaggctctgaatggt
cactctggcaaacatgcttcacttttgatggagatgtttggcaatccagtcaaagagctt
ttgctggacttcagcaagttccaggagatggtggaggccacacttgacatgagcatggtg
gagcagcatgagtttgttgtgaaacctgattttgatgagaatctggcagttttgagggag
aaaatcacagagttggaagacagtataaaatctcagctgaacagagtagcacgagacctt
ggactggagccaaacaagactgtcaaactagaaaacaacagtcagctaggcttctacttc
cgagtcacaagaaaggaagagaaagtcttgaggaacaacaagaactatcacacaattgat
acaaacaaaaatggagtgcgattccacaactcatctgtcagacagtacaatgaagaatat
ctgcaggccaaagaagaatataatgaacagcagaaaactgtcgtgacagaaatcattaac
attgcatctggctatgcagaaccgatgttaatgctgaatgatctgatagctcagttagat
gtgctggtcagttttggccatgtttctgcatctgctcctatcccttatgtacgaccaacc
atcctgcctcagggttctgggattttgactttgactgaggcaagacatccatgcctggag
atgcaggatgatgtctcattcatccccaacaatgcttcctttcacaaagataaacatatg
tttcacataatcacgggtcccaacatgggtggaaagtcaacatacatcagatcagtagga
gctattgtgctgatggctcagctgggctgctatgttccatgctccgaggcgggggtaagt
gtggtggactgcattttggcacgagttggggcaggtgacagtcagctaaagggagtgtca
actttcatggctgagatgttggaaacggcctccattctgagatcagcatctaaggattct
ctcatcattattgatgagcttgggcgaggaacatcaacttatgatggatttggacttgcc
tgggcaatatctgagtatatagtgaagaaaattggctgcttctgcatgtttgcaacacac
tttcatgaattgactgcgttggccgattcattgtcttcagtgaacaaccttcatgtgaca
gccctcaccacgaatgacacccttacccttctgtacagagtgaagcctggtgtttgtgac
cagagctttggaattcatgttgctgagttagctcacttccccaagcatgtgattgagttt
gcacgacagaaggccagggagttggaggactaccagagtctgagtctgacgggcacagga
ttggagggtgaggatgaacctgctgtgaaaaaacgcaaaatagcaaagcaggaaggtgag
gtgattatcaagggatttttgtcccgggcgaaagagctggcagcttcaaacctttctgca
gaggagctcatggcagaactgcaaaagatgaaggcggaagtgaaatccaagaaaaatccc
tatgttgaagatgttttgtccagaaaggctgttgtataa
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