Pomacea canaliculata (golden apple snail): 112566820
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Entry
112566820 CDS
T05881
Name
(RefSeq) splicing factor, arginine/serine-rich 15-like
KO
K13191
RNA-binding protein 16
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcan03021
]
112566820
03041 Spliceosome [BR:
pcan03041
]
112566820
Transcription machinery [BR:
pcan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
112566820
Spliceosome [BR:
pcan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112566820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
NBAS_11th
Motif
Other DBs
NCBI-GeneID:
112566820
NCBI-ProteinID:
XP_025098982
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All DBs
Position
LG6:25832461..25849734
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AA seq
1336 aa
AA seq
DB search
MEAVRAFNNELSSLYETRPPVSRAKMASVTKHAIKAIKFYKHVVQSVEKFVQKCKPEYKV
PGLYVIDSIVRQSRHQFGPEKDVFAPRFTKNIVSTFQNLFKCPPEEKCRVVRVLNLWQKN
AVFPVEVIQPLLDLAAEPNNVDLVLAAQRAVEKVVSAHQRNSTMAARTSNGGGEASLIAQ
QSEIVNTVTKLLEQTGEGNLLATAQEGQLQQLQLLQQQLMMHTEMMSSKPQTTPPVLDSN
LLAQIKLLTDQLLSKTSDSPTPVSHNNLPTSGPAMESGSGGNYGGYGDSGGSHGSGISGA
NSGVLKQMAEPGFNRKLLDFDYGDSDDEEERKEEGANVPQSLPGEVQNILNDPSIMQRIQ
QMSASLQNPEQHHLGVSQDMLRKQHLEQQQQQFDKEISQNPYHNYDQHGEQSDVIVVEDD
GDERDQERDYDRDHRRSRRSRDRSRSPRRRKHSRSRSRERRRSRDRHRRSRSRDHDREQQ
RERERERKKRGLPPLKDKHVGVCTRTLWFGHLAKHTTEDELRAAIEQYGSIDAINMIPPR
GCAFVCMTRRKEAAKALDRLKGYKLNSSSLRVAWAPGIGVKESSFKDFWDVELGVAYIPW
SKLPSDLSLLVEGATVDEESLPEHLKGIHIGRDIDEDGDSRSAPHSESQTPQMATPLANF
PASMPGIPTSQQMHMLAPHMMVPLPSQPPPRTIPPSSQIPPHSIGQMSLLGQNHPGQGTG
PPQGLTANLQTAAGTPVLSATVPISLASGVSHAQAVSVAASLLGAAQNLPLNIGAMDRAG
GQLVGNPGMSGINSTSALLAQSQQQPGILARPSFPPPGHLGAAAFGLPPRQGFSLPGQAL
RPPFPSVVENEMEEPKEWPADDSILEEEALEEMEQDTDHRVGIPPGMGAAPQGDGRGPAP
LMSLPMLGMRMRLPGPGGPRMGMPIPGLGGSGAPQAGMMVEVSQPGAAAGMAGLPVGALA
AGLAGPGGMLGPRLMRPGGPQAMVGPEAAEGMIRSPMPGGLMGPQGGAAAMGLRLGMGNQ
GPRGIGPANMTLGQRMPGLPGSPGLRGMGPGGGPIRIVLGNQNPRGPGPGSLGVRPVGMG
MDGLRPGGMQGPRNALEEMQGPGAVRSGGSQGPSEGNGLLNQGPSGLLQGLMMGAALRGG
RPGLLGLRPNMPMNSGFRFGPQQPMGIAFRGVRPDFLRPPGMDKPLMDGIHGADRLGPSF
SGTLAIRSLENEEKSPEYGEGFEDDDDNRENVVPKDSDFRVADKDIMINSDLRNSKAAAA
AGSIGSDLAEIAKPRDRAGRQSRWSDIGSSDSKLCEPHAETNGPALESECQSATQVQSGS
EVMTVNPTGMEGMAEG
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgtcagggcttttaacaatgagttgtcatctctgtatgagacacggccaccc
gtgtcaagagccaaaatggccagtgtaacaaaacatgccataaaagccatcaaattctac
aagcatgtggtacagagtgtggaaaaatttgtacagaagtgcaaaccagagtacaaagta
ccaggcctttatgtaattgactctattgtgagacaatcaagacaccagtttggtccagaa
aaggatgtgtttgcaccacggtttaccaaaaacatagtatctactttccagaaccttttt
aaatgtccaccggaggagaagtgtcgggtggtacgtgtccttaacttgtggcagaaaaat
gcagtgtttcctgtggaagttatacagcctttgctagatttagcagctgaaccaaacaat
gtggatttagttcttgcagcccaacgtgcagtagagaaggtggtgtcagcacaccagagg
aattctacaatggctgcaagaacaagcaatggtggaggagaagcaagtttaattgctcag
caaagtgaaatagtcaacactgtcacaaaattactggaacagacaggagagggtaatctg
ctggcaacagctcaggaaggccaactgcagcaactacagttgctccagcagcagttgatg
atgcacactgaaatgatgtcaagcaaacctcaaacaactcccccagtcttggacagcaac
ctgttagcacaaatcaaactgcttacagaccagcttctttcgaaaacatcagactctcct
acacctgtctcacacaacaatctccccacttctggtcctgctatggaaagtggaagtgga
ggcaactatgggggatatggggacagtggtggcagccatggtagtggcatcagtggggca
aacagtggagttttgaaacagatggctgaaccaggttttaacagaaaactgttggacttt
gactatggtgacagtgatgatgaggaggaaaggaaagaagagggagcaaatgtaccacag
tcattaccaggagaggtgcagaatatcctaaatgaccctagcatcatgcagagaatccag
cagatgtctgcaagtctacagaacccagaacagcatcaccttggagtttctcaggatatg
ttgcgtaaacagcatcttgaacaacagcaacaacagtttgacaaggagataagtcagaac
ccttatcacaactacgatcagcatggggagcagtcagatgtaattgttgttgaggatgat
ggtgatgaacgtgaccaagaaagagattatgaccgagaccatcgtaggtcacggcggtct
cgtgacagatccagatcaccaagacgaagaaagcattcaagatcgcgctctagagagagg
cgtcgatctcgagacaggcacaggaggtcaaggtcaagagatcatgaccgagagcagcaa
agagaaagagaacgggaaaggaagaagagagggcttccccctctgaaagacaagcatgtt
ggagtttgcacgagaactttatggtttggacatcttgctaaacatactactgaagacgaa
ctaagagcagcaattgaacagtatggaagtatcgatgccatcaatatgatcccaccaagg
ggatgtgcttttgtctgcatgactcggagaaaagaggctgcgaaggctttagataggttg
aaaggttataaactgaactcaagttctctccgggtggcctgggcacctggcataggagta
aaagaatcttcattcaaagacttttgggatgtagaactaggtgttgcatacatcccatgg
agtaaattgccatcagacttaagtctccttgttgaaggtgccactgttgatgaggagtct
cttccagagcatctcaaaggcattcacattggacgagacatagatgaagatggagatagt
cgctcagcacctcattcagagagccagactcctcagatggcaacaccgttagctaatttc
cctgcatcaatgccaggcattccaacatcccagcagatgcacatgctggcaccgcacatg
atggtgcctttgccaagccagcctcctccaagaaccatccctccctccagtcagatccca
ccacattccattgggcagatgtctcttctagggcaaaatcatcctggccagggtacagga
cctccccagggattgactgcaaatcttcagacagcagcaggaactcctgttctttctgct
acagtgcccatatcattagctagtggtgtttcacatgcacaggcggtctccgttgcagca
tctcttcttggagcagctcagaatcttcccctgaacattggagcaatggatcgggctggt
ggacagcttgtgggcaatccagggatgtcaggcatcaacagcacaagtgctcttctggct
cagagtcagcagcaaccaggcattcttgctcgtcccagctttcctcctcctggacatctt
ggtgcagcagcttttggccttccaccacgtcaaggattttccttgccgggtcaggctttg
cgcccacctttcccatctgttgtagagaatgagatggaagagccaaaggaatggcctgca
gatgacagcatcctagaagaagaggctttggaagaaatggagcaggacaccgatcatcga
gtgggcatcccacctgggatgggtgcggcacctcagggtgatggcaggggacctgcaccg
ttgatgtctttgcccatgctgggcatgcgcatgcgtttgccaggaccaggaggacctcgc
atggggatgccaatacctggattaggtggcagtggtgccccccaggctggcatgatggtg
gaggtcagccagcctggtgcagctgcaggtatggctggactccctgtgggtgctcttgca
gcaggactggcaggaccaggtggcatgctgggtcccaggctaatgcggcctggagggccc
caagccatggtaggaccagaagcagctgaaggcatgattcgaagtccaatgccaggtggt
ttgatggggccacagggaggggcggcagctatgggcttacgactaggaatggggaaccaa
ggtccacgtggaattggccctgccaatatgacactggggcaaaggatgcctggtcttcca
ggcagcccagggcttagaggaatgggtccaggtggtggaccaatcagaattgtgctagga
aatcagaatccaagagggccaggacctggaagtttaggggttcgacctgtggggatggga
atggatggcttgaggcctggaggcatgcagggtccaaggaatgccctggaagagatgcag
gggcctggtgctgttcgtagtggtggtagtcaagggcccagtgaaggaaatggtctgttg
aatcagggacctagtgggctgttacagggactgatgatgggagctgctctaaggggtggt
cgacctggacttttgggtcttcgtcccaacatgcccatgaatagtggctttcgttttggc
cctcagcagccaatggggatcgctttccgcggtgtgcggccagactttctgagacctcct
ggcatggacaaaccattgatggatggaattcatggtgcggacagattggggccatcattc
agtggtactttggcaatcaggtctttggaaaatgaagaaaaaagtccagaatatggggag
gggtttgaagatgacgatgataacagagaaaatgtagtccccaaagactctgattttaga
gttgcagacaaagatattatgataaactcagacttacgaaacagcaaggcagcagcagca
gcaggaagtataggttcagatctggcagaaatagccaagcctagagacagagcaggtaga
cagagtcgatggagtgacattggttctagtgacagcaagctgtgtgaacctcatgcagag
accaatgggcctgccttagagagcgagtgtcaaagtgccactcaggttcagtctggatcg
gaggttatgactgtaaatcccacagggatggagggcatggcagagggatga
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