Pomacea canaliculata (golden apple snail): 112568006
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Entry
112568006 CDS
T05881
Name
(RefSeq) uncharacterized protein LOC112568006 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112568006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112568006
Enzymes [BR:
pcan01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
112568006
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112568006
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
112568006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
112568006
NCBI-ProteinID:
XP_025100777
LinkDB
All DBs
Position
LG1:39263915..39310331
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AA seq
968 aa
AA seq
DB search
MGKSQEEDMARPVKRQVVSASANLEVVSEENFARRLQGMSACLNCQKERSGGAGGGGGGG
GGSGGSAHGPRPSHKLGGRGGKQGRRKQAKSNTPIVIHLKDTLRSVLQQRQRSFDTDSDV
SARSTDDDVTQEVFGDVSSIPEFVPQQAPRVPPSRSHPHHQLSLSRQRREKSKKNLTALI
SVIEKAHRKDPSSSGLVESNLSQNSICSKLSHLLNNAVSLHDIGLGSQPHPPQRNIGECD
NVDVICNDLYETEKKSTAETLEDSDSVLSDKSSITSSSDALSDSDSLVVEESAGVEFTPE
ELQRLAEYTTGFPLYRYDCAPSECPECLSAWYTHQIYQYEGCYLDTLVAPRATRPDSTSS
KHRSKKHSSNNNNNERDPGGVLAEGADSEGCVFAPATADDVTSEDRSSEVERGSTNITNT
TTTTTCLSLASSSSSLFSSSGKESGWPYSKGARQLWDIDVSQAGRRNSREQRGDNPFADS
VYLDLTGTDVSISVYYHHSLMQDEVARATMATSAAMLSPAFCAAAAAAAAAASSSLYSAY
YSTFAGSAIYSLPMPLTLFSEAALPKIAMVPPHELKKFTTTAPPQRQWIVASQPDTKRPS
AIFSVLCYNVLCDKYCTRQMYGYCPVWALNWEYRKKGIMDDIRSLNGDIISLQEVETDQF
FNFFLPELKRDGYDGIFSPKSRARTMTEQERKHVDGCAIFFKKAKFSLLEEKLVEFNQLA
MANAAGSDDMLNRVMTKDNIGLVALLETKPPIFENGMPPEPHTRQLLLVSTAHIHWDPEF
CDVKLVQTMMLMCELQRFVEEATRKYTLPFPGPYDCNSIPFLFCGDLNSLPDSGVIEFLT
NGRVAVNHEDFKDNEYDHCMKKMSNGDKDHIYHNFRLARAYNDIMPATNFTYDFKGIIDY
IFYSRDHLNVLGMLGPYDEEWFRQNKILGCPHPHIPSDHFSLFVEMEMPIRLPPPGRGAP
LPPLPKPR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcgcaagaggaggacatggcgcggcctgtcaaaaggcaggtggtaagcgcc
agcgcaaacctagaggtggtcagcgaggagaactttgcgcgccgcctgcagggcatgagc
gcctgcctgaactgccagaaggagcgctcggggggagcgggaggaggagggggaggcggt
ggtgggagtggagggtccgcgcacggaccccgtccaagccacaagctagggggccgcggg
ggcaagcaaggacggcgcaagcaggccaaatccaacacccccatcgtcatccatctcaaa
gacaccctgcgctcggtcctgcagcagcgccagcgcagctttgacaccgactcggacgtg
tcggcacgctccactgacgatgacgtcacgcaagaggtcttcggggacgtctccagcatc
ccagaattcgtgccgcaacaagcgccgcgtgtacccccgagtcgttcgcaccctcaccac
cagctgtcgctgtcccgtcagcggcgcgagaagtccaagaagaacctgacggcgctcatc
tccgttatcgagaaggcgcaccggaaggacccgtcttcgagtggtctggtcgagtccaac
ttgagtcagaactctatctgctccaaactgtcgcacctgctgaacaatgccgtgagcctg
cacgacataggtctaggctcgcagccgcatccgccgcagcgcaacatcggggagtgcgac
aacgtggatgtcatttgcaatgatctctatgagaccgaaaaaaagagcacagcggagacg
ttggaggactcggactccgtgttgtcagacaagtcttccatcacctccagctcggatgca
ttgtcggactccgacagtctggtggtggaagagagtgcgggggtggagttcacacccgag
gagctgcagcgccttgccgagtacaccacgggcttcccactgtaccgctacgactgcgcc
ccctccgagtgccccgagtgcctgtcagcgtggtacacacaccagatttaccagtacgaa
ggatgctatctagatacgttagttgcccctagggccacgcggccggactcgacctcatcg
aaacacagaagcaaaaaacattcttctaataacaacaacaacgaaagagacccaggcgga
gtgttagcggaaggtgcagactccgagggttgtgtttttgcccctgcgacagcggacgat
gtcacctcggaggacaggtcttccgaggttgagcgtggcagcactaacatcaccaacact
accaccacaacgacctgtctcagtctagcttcatcgtcgtcctcattattttcgtcaagc
ggcaaggaaagcggctggccatacagcaaaggcgcgcggcaactgtgggacattgacgtg
tcgcaggcggggcggcgcaacagtcgcgagcaacgaggggacaaccctttcgctgacagt
gtgtacctggacctgacgggcaccgacgtgtccatctccgtatactatcaccacagcctg
atgcaggacgaggtggcccgtgccactatggccacttcagccgccatgctgtcgcccgcc
ttctgcgccgctgccgctgccgccgccgcagccgcgtcgtcatccctgtactccgcgtac
tactccaccttcgcgggctccgccatatacagcctgcccatgccgctgacgcttttcagc
gaggctgccttgcccaagatcgccatggtgccaccccacgagctcaagaagttcacaaca
acagcgcctcctcagagacagtggattgtggcatcccaaccagacacaaaacgtccttca
gccatcttcagtgtgctgtgctacaacgtgctgtgcgacaagtactgcacgcggcagatg
tacgggtactgcccggtgtgggcgctgaactgggagtaccgcaaaaagggtatcatggac
gacatccgcagcctcaacggcgacatcatcagcttacaggaggtagagacggaccagttc
tttaacttcttcttgccggaactgaagcgggatggctacgacggcatcttctcgccgaag
tctcgtgcacgcaccatgacagagcaggaacgcaagcacgttgacggctgcgccatcttc
ttcaagaaggccaagtttagcttgctagaagaaaagctggtggagtttaaccaactggcg
atggccaacgctgcagggtcggacgacatgctgaaccgcgtcatgaccaaagacaacatc
gggctggtggcgctgctggagaccaagcctcccatatttgagaacggcatgcctcctgag
cctcatacacggcagctgctgctggtgtccacagcccacattcactgggaccccgagttt
tgtgatgtcaagcttgtccagaccatgatgctgatgtgcgagctgcagcgttttgtagaa
gaagccactcgaaagtacaccctgcctttcccaggcccatatgactgcaactcaattcct
ttccttttctgtggtgatctgaactccctgccagactcaggagtgatagaattccttaca
aacggacgagttgctgtaaatcacgaagattttaaagataatgagtatgatcactgtatg
aagaagatgagcaatggtgacaaggaccacatataccacaacttccggcttgcacgtgcc
tacaatgacatcatgccagccacaaattttacctatgacttcaaaggaatcattgactac
atcttctactcaagggaccatctgaatgtcttgggaatgcttgggccatacgatgaggag
tggttccggcagaacaagattcttggctgcccacatcctcacataccatctgaccacttc
tctctctttgtggagatggaaatgcccatccgcttgcctccaccaggtcgtggtgctcct
ctcccacctctgcccaagcccagatag
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