Pomacea canaliculata (golden apple snail): 112569763
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Entry
112569763 CDS
T05881
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03030
DNA replication
pcan03410
Base excision repair
pcan03420
Nucleotide excision repair
pcan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
112569763
03410 Base excision repair
112569763
03420 Nucleotide excision repair
112569763
03430 Mismatch repair
112569763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcan03032
]
112569763
03036 Chromosome and associated proteins [BR:
pcan03036
]
112569763
03400 DNA repair and recombination proteins [BR:
pcan03400
]
112569763
DNA replication proteins [BR:
pcan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
112569763
DNA Replication Termination Factors
ELG1-RFC complex
112569763
Chromosome and associated proteins [BR:
pcan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
112569763
DNA repair and recombination proteins [BR:
pcan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
112569763
Check point factors
HRAD17(Rad24)-RFC complex
112569763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_24
AAA_14
DUF815
ResIII
DEAD
AAA_16
AAA_5
DNAX_ATPase_lid
Mg_chelatase
Gp44_lid
AAA_28
AAA_30
AAA_7
AAA_19
TIP49
PhoH
DUF6019
ATPase_2
RNA_helicase
AAA_3
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
112569763
NCBI-ProteinID:
XP_025103446
LinkDB
All DBs
Position
LG1:34341253..34345073
Genome browser
AA seq
328 aa
AA seq
DB search
MDKTTNLPWVEKYRPAHLDDLISHKDIISTISRFVKEERLPHLLFYGPPGTGKTSTILAI
AKQIYTPKELSSMVLELNASDDRGIGIVRGQILNFASTRTIFKSGFKLVILDEADAMTKD
AQNALRRIIEKFTENTRFCIICNYLSKIIPALQSRCTRFRFGPLKTDQMIPRLRHVISQE
GISVTEDGMKALVTLATGDMRRALNILQSTSMAFDEVNEENVYTCVGHPLRRDIENIVKW
VLNDGFKEAYSNIVQVKMAKGLALQDILTEIHAYIHRIELPVSVRLQLLTKMADIEYRLA
SGASERIQLGALVAVFQNARDLIVQETL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggataaaactactaatttgccgtgggtcgagaaatatcgtccagcacatcttgatgac
ctgatctctcacaaagacatcatcagtacaataagccgatttgtcaaagaagaacgactc
cctcatctgctgttctatggacccccaggcacagggaaaacaagtaccatccttgcaata
gctaaacaaatatacacgcccaaggaacttagttctatggttctggagctcaatgcttct
gatgaccgtggtattggcattgtaagaggacaaattcttaactttgctagtacaagaaca
atcttcaaatctggattcaaattggtcattctagatgaggcagatgctatgacaaaagat
gctcaaaatgctttgaggaggatcattgagaaatttacagaaaatacaagattttgcatc
atctgcaactatttgtccaagattattccagcacttcagtcaagatgtacacgatttcgc
tttggtcccctgaagacagatcagatgatacctcgtctgagacatgttatttcccaagag
ggcatttcagtcacagaggatggaatgaaagcattagtgacactggccactggggatatg
agaagagcattaaacatcttgcagagcacatctatggcctttgatgaggttaacgaagag
aatgtgtacacttgtgtgggtcatcctctccgccgtgacatagagaacattgtgaaatgg
gttctcaatgatggtttcaaagaggcttacagcaacattgtgcaggtgaagatggccaaa
ggtcttgccttacaagacattcttacggagattcacgcctacatccacaggatcgagctc
ccggtcagtgttcgacttcagcttctgacaaagatggccgacattgaatatcgccttgca
agtggtgcaagtgaacggatccagcttggagcattggttgcagtttttcagaatgctaga
gatcttattgtgcaagaaacattgtga
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integrated database retrieval system
