Pomacea canaliculata (golden apple snail): 112569771
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Entry
112569771 CDS
T05881
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112569771
03015 mRNA surveillance pathway
112569771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112569771
03041 Spliceosome [BR:
pcan03041
]
112569771
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
112569771
Spliceosome [BR:
pcan03041
]
Complex C
Other components
EJC/TREX
112569771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
GAPES1
Motif
Other DBs
NCBI-GeneID:
112569771
NCBI-ProteinID:
XP_025103452
LinkDB
All DBs
Position
LG8:7987040..7993597
Genome browser
AA seq
503 aa
AA seq
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MAEMSGVSILQHEIEKAKDKLKDVNENIKKLTGRDPEDLRSVKSRQQEARGRGRLFTLAR
RGIMPAESPGGPPAKKRMMAGAFARLGPMIGRRREREDSGDEDEPPNKLTVHSSVVATPK
EVRSRKECLQEQSNDKEGLQRNRRMFGLLLGTLQKFKTEARAQDEKVQQRRMIEKKLEED
AEREKEHYRQETKLLIEESQLEQAKISRLQQKMELVNEHEALAAETRKLQNFLCTRAKPR
IFWLPKALNSAAESKLKESKKVVEKMLKDKQEALEREINEVMEREQQREERIRMRLRQDA
NLLDKENNSKSGRTGTDGGSRQSRDKKGSSGAHKEAKKKSVEMQYDDEEEEMEEEDEVTR
IELGDREVAGGDKGKRGEEGKAKELTVNEKPEEGKKVESDKGGYDDGNNTDVDYNDDEMA
SEGEMPQHKSSLGEGEMLVVGESSVMTSKEQRKEEGGEDRWKEVALIQSTDQASVADANA
ELFSSGALQRTVEEGVVEEAANE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatgagtggcgtaagcattttgcaacacgaaattgaaaaagctaaagacaaa
ttgaaagatgtgaatgaaaatattaagaaattaacaggaagggatcctgaagatctcagg
tcagtaaaaagtcggcagcaggaagccaggggtagaggacgacttttcacccttgcaagg
cgtggaatcatgccagctgaaagtccaggtggtccacctgcaaaaaaacgtatgatggcg
ggagcatttgcgaggcttggaccaatgattggacgtcggcgagagcgagaggacagcgga
gatgaggatgagcctcctaacaagctgactgtccattcgtctgtagtggctacccctaaa
gaagtgcgtagtcgcaaggagtgtcttcaggaacagagtaacgacaaggaaggactgcag
aggaacagacgaatgtttggtttgttgcttggaacactgcagaagttcaaaacagaggct
cgtgcccaggatgaaaaggttcagcagcgccgcatgattgaaaaaaaactggaagaagat
gcagaacgtgagaaagaacattaccgccaagaaacaaaacttttaattgaggagtcacag
ctggagcaggccaaaatttctcgtctccagcaaaagatggagcttgtcaatgagcacgaa
gctctagctgcagagacaagaaagttacaaaacttcctttgcacacgtgcaaaacctcgc
attttctggctgcccaaggcattgaactctgctgctgagagtaaactaaaggaatctaag
aaggttgttgaaaaaatgctcaaggataagcaagaagcccttgaacgtgaaatcaatgag
gtcatggaacgtgaacagcagcgcgaggagcgcatccgcatgagattgcgtcaagatgcc
aacctgctggacaaagaaaacaatagcaagtcgggtcgcactggaaccgatgggggctct
aggcagtcacgtgataaaaaaggcagcagtggtgctcacaaagaggccaagaagaagtct
gtagagatgcaatatgatgacgaagaagaagaaatggaagaggaagatgaggtgacgcgc
atcgagctgggtgatcgcgaggtagcaggtggtgataaagggaagagaggggaggaagga
aaggccaaagagctaacggtgaatgagaagccggaggaaggcaagaaggttgagagcgat
aagggtgggtacgatgatggaaataatacagatgtggattacaacgacgatgaaatggcc
agcgagggagaaatgcctcagcataagtctagtttaggggaaggggagatgctggtagtt
ggggagtcatctgtgatgacaagtaaggagcagagaaaagaggagggaggtgaggacagg
tggaaagaggtcgccttaatacaaagcacagaccaggcttcagtggctgatgcaaatgca
gagttattcagtagtggggctttgcagaggacggttgaggaaggtgtggtagaggaggca
gccaatgaatag
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