Pomacea canaliculata (golden apple snail): 112570799
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Entry
112570799 CDS
T05881
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX28
KO
K20096
ATP-dependent RNA helicase DDX28 [EC:
5.6.2.7
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcan03009
]
112570799
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112570799
Ribosome biogenesis [BR:
pcan03009
]
Eukaryotic type
Other ribosome biogenesis factors
112570799
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_22
LpxB
Motif
Other DBs
NCBI-GeneID:
112570799
NCBI-ProteinID:
XP_025105207
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All DBs
Position
LG8:complement(5144734..5151725)
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AA seq
556 aa
AA seq
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MFRAFASQRICQWCCSFHQHLIRMHFTNGVATELPRITIPVKMQKQLIKLRERKQHKQHQ
SKKPSFKSPLVISCKRSNYNHHRGQTYSDFGPSTLASYGWKNRKAAGDYMTIMCHDKNPA
LLSEESEITFTDLKLDDDIKKAVLALGYQKPTAIQQAALSSILSGTHTLCAAETGSGKTL
AYLLPALDMLLRRKRCDIMTQTENSPSVIILAPSRELADQITGVARSLQEHLDFVPYSVC
GGRGTKGRLAWPVRKPMDILISTPGVLRKFLIAGHIKRSALQQIILDEADTLLDDSFIGT
LDSILQRLRVQAQTGIDPVTTDNKEKSSPFVSGVQFVLVSATMPRDLQNSIGTYLPVDSI
KKVTTAGLNRLMPHVPQKFLRVLPSRKPEIILKLAKQQIERSMPSMIFCNDSPTSFFLKH
LLEENGITSAIINGKMQEKYRRGVFDKFKDGHFNIMVATDVASRGXDTLHVQHVINYDFP
LFVSDYIHRAGRVGRVGAKHNGQVTSLVSHSWEVDVLWQIEIAARKVSEIHNVNANIKRK
VEADFSRRHGKPSDII
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgagcgttcgccagtcagcgaatctgtcagtggtgctgtagttttcatcagcat
ctaatccgaatgcacttcacgaatggtgtggctactgaacttccaagaatcaccattcca
gttaaaatgcagaaacagctgataaaactgcgtgaacggaagcagcacaaacagcaccag
tcaaagaaaccatcattcaagtcacctcttgttatatcttgcaagcgcagtaattacaac
caccacagaggacagacttacagtgattttgggccatcaacattggcatcatatggctgg
aaaaatcgcaaagcagctggggattatatgacaatcatgtgtcatgacaagaatccagca
ctgctgtcagaagagtcagaaataacatttactgatttaaaacttgatgatgacataaag
aaggcagtacttgcacttggctaccaaaaacctaccgctatacagcaagctgctttgtca
tctattctgagtggaacacacacactgtgtgctgctgaaactggctcaggaaagactctg
gcatacttgctgccagcccttgacatgctgctgagacgaaagagatgcgacataatgaca
cagacagagaactctccttcagtcataattttagccccatccagagaactagcagatcag
attacaggagtagcaaggagtctacaagagcatcttgattttgttccttactcagtttgt
ggaggaagagggacaaagggtcgattggcatggccagtgaggaagcctatggacattctt
atttctacacctggtgtattacgaaaatttcttattgcaggacacattaaacggtcagcc
ctgcagcagattattctggatgaagcagacactctgcttgatgacagcttcattggcact
ttggacagtattctgcaaagactgagggtccaggcacagacaggaatcgaccctgttaca
actgacaacaaagagaaatcttctccattcgtgtctggtgttcagtttgtgttggtcagt
gccacaatgccacgagatttgcaaaacagcattggcacctacctaccagtggactctatt
aagaaagtgaccactgctggtttaaatcgactgatgcctcacgttccccagaaattttta
agagtgctgccatcacggaaaccagaaataattctaaagctagcaaagcagcaaattgaa
agaagtatgccatccatgatattctgtaatgacagccccacaagtttcttcttaaagcat
cttttggaggaaaatggtatcacttctgcaattataaatgggaagatgcaggaaaagtac
cgccgtggtgtgtttgacaagttcaaagatgggcatttcaacatcatggtagccacagat
gtggcatctcgcggcntagacacccttcatgtacaacatgtcataaactacgattttccc
ttgtttgtgtctgattacattcatcgagcaggccgtgttggtcgtgtaggggccaagcac
aatggtcaagtgaccagccttgtatcacacagttgggaggtggatgttttatggcagata
gagattgctgccagaaaagtatccgaaatacacaatgtcaatgccaacatcaaacgaaag
gtggaggccgatttttccaggagacatggcaaaccctccgacattatttga
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