Pomacea canaliculata (golden apple snail): 112571414
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Entry
112571414 CDS
T05881
Name
(RefSeq) mRNA-decapping enzyme 1B-like isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112571414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112571414
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112571414
mRNA degradation factors
5'-3' decay
Decapping complex
112571414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
112571414
NCBI-ProteinID:
XP_025106135
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All DBs
Position
LG9:complement(22310321..22373294)
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AA seq
500 aa
AA seq
DB search
MADQNRINLATLQQRDPYITEILGTAKQVALYIYKDEWEKTSISGSLFVYKRSACPLHGV
MILNKQGLNNQVEPITELMEFQITPPFLLYRNGKAIYGIWFYKAKECEELGGLMDRLRRE
AVREKQGGLAGVIASTASLAVSAGDQRQVDILKLLSGAQQRYDNKAKSGGTTEPQHMTGK
AAVTSGDVVRPTPLKAPSEVGAGESSKGTSGHGEGPSQLQEIFKKAKRIQHSTSLLDEWT
GDPPPDVTITPISMLSRSLSVSEVESGTQTIGGPPLKLPIRGRTVEEIEREIKSGKAHSQ
ADLPKVQGQEGVVGMGQSPSTQELLSMIVAAVGDGQGPALPAMPQPTPSGDCRSHIIYAG
DADLMKTLPSDLLKPEDFERQTAVSPLHLSSKQTESQAAAGIGASCPDVLLTPLAFTSHP
PPLGTTSPVPNHQAILERLNALTIPPNTALSEQIRVGELTPLTRQQLQQALLHMIRHDDN
FLNRVHEAYLASFRQVTGKR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaaaaccgcatcaacttggctactttgcagcaaagagatccgtacattaca
gaaatacttggcacggcaaaacaagtcgctctctacatttacaaggatgagtgggagaaa
acatccatcagtgggtcattgtttgtctacaaacggtcagcatgtccactgcacggagtg
atgatcctgaacaaacagggtctgaacaatcaggtagagcctatcaccgagcttatggag
ttccagatcaccccgcctttcttgctctataggaacggaaaagccatctacggtatctgg
ttctacaaagccaaggaatgcgaggagctgggaggtctcatggacaggctgcgacgggaa
gctgtcagggagaagcaagggggactggccggcgtcatagcaagtacagcaagcctggct
gtgtctgctggggatcagaggcaggtcgacatcctaaagctgctgtcgggggcccagcaa
cgctatgacaacaaggccaaatctggtggcaccactgagccccagcatatgactggcaag
gcagcagtaacaagtggagatgtggtgcgccctacgccccttaaagcccccagtgaagta
ggtgcaggggagagcagcaagggaacaagtgggcatggtgaggggccaagccagcttcaa
gagatcttcaagaaggccaagagaattcaacacagcaccagcttgctggacgaatggaca
ggagaccccccgcccgacgtgaccatcacaccaatctccatgctaagcaggtcgttatct
gtatcagaagtggagagtggcacacagaccataggaggtccaccattgaaactacccatc
cgaggccgaacagtggaggagattgagcgagagatcaaaagtgggaaggcccattctcag
gccgacttgcccaaggtgcagggtcaggaaggggtggtaggaatgggccagtcccccagc
actcaagaactgctgagcatgattgtagcagcggtgggtgatggccaggggcctgccctg
cctgccatgcctcagcccacaccatctggtgattgtagatctcatatcatttatgctgga
gatgctgacttaatgaagacattaccatcagacctactgaagcctgaagattttgagaga
cagacagcagtctcgcctttacacttgagcagcaagcagacagagagccaggcagcagca
gggattggcgccagctgtcctgatgttcttctcacccccctggctttcacttctcatcct
ccaccactgggaaccacctctcctgtgccaaaccaccaagctattttagagcgactcaat
gccctcacaattcccccaaatactgcattgtcagagcagatacgggttggagagctaact
cccttaacacgccagcagcttcagcaggctctgttacatatgatacggcacgatgacaac
ttcttaaaccgtgtacacgaagcatacctggctagcttccgtcaggtcaccggtaaaagg
tag
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