Pomacea canaliculata (golden apple snail): 112571832
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Entry
112571832 CDS
T05881
Name
(RefSeq) uncharacterized protein LOC112571832
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
pcan
Pomacea canaliculata (golden apple snail)
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcan03041
]
112571832
Enzymes [BR:
pcan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112571832
Spliceosome [BR:
pcan03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
112571832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
PLA2_inh
Motif
Other DBs
NCBI-GeneID:
112571832
NCBI-ProteinID:
XP_025106937
LinkDB
All DBs
Position
LG9:11690435..11699785
Genome browser
AA seq
1767 aa
AA seq
DB search
MSVAHKIGESPRTDDVVITESVDFAGLLLSKNVLSGLQNSGFERPSPIQLKAIPLGRCGL
DLIVQAKSGTGKTCVFAVIALESLQVQAQSTQVLVLAPTREIAIQIWEVIRSLGSAIPGM
QCHTFIGGMPLHEDKKKLQLCHIAVGTPGRIQNLIETGNLKTESIRLFVLDEADKLLEDS
FQEQINWIYSALPDSKQILALSATYPESLAQHMTMYMRNPTFIRLNVTDPTLLGIKQYFT
SVPNHPLPNKVFEAKTASVIHLLSSVSFHQCLIFSNMQTRAQNLESELTSCGWPTTCIAG
SLEQKDRIMAMAKLKSYQCRILISTDLSSRGIDADKVNLVINMDIPKDHETYLHRIGRAG
RFGSYGAAVTIISDGQELLDLQALEQKISTHIPPLPEPIPCDLVKHQLQVKLDDVVSTEQ
FITQPQSKGYGILGLCMSMESQSNMQNQSGRHSYNEHTNKLLPEAPLGTMEEEEKVETVK
YEAGENSHASSVESTTSELSYIQNGFPEKIVSVVPSKDGHFEVGVNGLIASTESTDFKNH
SSDETHVDEDDKIVLLEPSIENTDLDLSIVKELVGAEENYPKVSSESKDAANQTNTTVKE
DRDTVVMSDPSGESLAASCSLQINNLDDVVDSEVTSANCLSLCDAHGGQVRTMTDELNIN
MVTLNITKQSILPADSSASDKNQVSSCIDLAQNDIHLNSLSFAVETVAKDSSSCSKLSLD
KAQDGQKLDESCLSKSKGKETLEDVCLNETKRRQALEEKFFSKTEMRKTSAEIQLDKGKL
DQRENTSAEVSMWHSSEDVDSAGVGTDGHKARCNNAPQGHQEHPSASPAEVTGHPQTQDL
NRETLEGCTLGNGTNASLSKVKNKTSRINAAATLWGDMLGKDFQEQEKRGSSNTLKALNG
QSKKSTLDKENQPLMTHSNNIGKQKTKISSGACAVAKLWGDMLGSDYGDVNDSVADETVS
KSSKQHRERKPQANSADRVSRDSENMEQNLVQDTQDQKGESRRVKDGERKQIKMEQLSWE
SELALYVAARAKMNASKSNDKGETKETADVFIRPQKQARRRLAGVKKSSASENNEKANSA
ESTRIYCEAAQNKEELEEKIQMTETISAKISPTRIAKNCLDKDSVRLDHLPDTTENESAA
ETIAKNILNSQAKEKTQTAPEEKQQTINNTMTGLDGQQSSVVSEESDAATLGRLQGVGFN
DDDFSADNSTSPHKLMSMKSVSQKNNLQDFENRSSHHLETPGIRSILARLSASHSTNLTH
NVHTYSAALQDYSLFLEQASSIDPPSVLNIVNDTFQSSSAVPSADDLKKISEFLHNFHGD
IQHRVLSENVVAAGSDLQISSVKEKGFDKATQTDCSFSHVSGVELGHSGMLTPKCESCSA
VVKPILVSPVEPIPSECCDDKGKVKNDVQISQGEIQTKITFQRERELPVLPSFSPPKGTN
KPKHVDRKNKIATFPAEASTKHEELPQTIAMNKMNAVKGQGSKLLLMKHRGDQKESAPNK
QEQPVQEGACGTSKIGKNFLHNMHTSLQLPAKQTTGFLETEAEESFVSSLDSSSPISSDN
EETEATAAEKPKERNTGFYKNRYTDEPAVPRVPPSQMRGSENDELARKRHGAGRKSKNLV
TGCRHNDTKRSHQTCGFFTNEVNQYLDALNFWHAWYYQKPGGYSNIPAQVGDWRSPYASG
ASFPHLHFPHNDSRADWFHSRSVPCSPAAYSPEGKNCRHSHKPQDPATLYVQSMWSRAKT
QQEYIRQMVGFYKEMSKSQPSFFKNSN
NT seq
5304 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttgcccacaagattggagagagcccaagaacagacgacgtcgttataacagaa
tctgtggattttgcaggcttgcttttgtccaaaaatgtactcagtggtctgcaaaattca
ggatttgaacgaccatctcctatacagctgaaggctatcccattgggaaggtgtggacta
gatttgattgttcaagcaaaatcaggaacaggaaagacatgtgtctttgcagtaattgct
ttggaaagtttacaagtccaggcacagtcaacacaggtgctggtactggcaccaactcga
gaaattgccatccagatctgggaagtcattagaagtctggggagtgcaatacctggcatg
caatgccatacctttattggaggaatgcctcttcatgaggacaagaaaaagctgcagttg
tgtcacattgctgttggaacaccaggtcgcatccagaatctaatagaaacagggaacttg
aagacagagagcattcgactgtttgttttggacgaagcagacaagctcctggaggatagt
tttcaagagcaaatcaactggatctattctgcattgcctgacagcaagcagatcttggca
ttatctgccacatacccagagagcttggcacagcatatgacaatgtacatgagaaacccg
accttcattcgtctcaatgttaccgatccaactttgctgggaattaaacaatattttacc
agtgtacctaaccatccacttcccaacaaagtttttgaggccaagaccgcaagtgtgatt
catttgttatctagtgtgagcttccaccaatgtctcattttttccaacatgcagacaaga
gcccagaacctggagagtgaactgactagttgcggctggccgactacttgcattgctggc
agtctagagcagaaggatcgtatcatggccatggctaaactgaagtcctatcaatgccgc
attctcatctctacagatttgtcctcaagaggcatcgatgctgataaagttaatttggtg
atcaacatggatattcccaaagaccatgaaacatacttgcacagaattggacgtgcaggg
cgctttgggagctatggggcagctgttaccattatcagtgacggtcaggaactgcttgat
cttcaagccttggaacagaaaatttcaacccatattccaccacttccagaaccaatacca
tgtgatttagtgaaacaccagctgcaggtgaagctggatgatgttgtcagcacagagcag
ttcatcacccagccacaaagtaagggttatggaatactggggttatgcatgtcaatggaa
agccagtccaacatgcagaaccagtcaggaaggcactcctacaatgagcataccaataaa
ctgctccctgaagcaccactggggaccatggaggaggaagagaaggttgagactgtgaag
tatgaagcaggagagaacagtcatgcatcctctgtggaaagcaccacctctgagctcagc
tacatacaaaatggtttcccagaaaagattgtatctgttgtgccgtcaaaagatggacat
tttgaggttggtgtgaatggtctgatcgcatcaacagaatcaactgacttcaagaaccac
agctctgatgagactcatgttgatgaagacgacaaaattgtattgttggaacccagtatt
gagaacacagacttagatttgtctattgtaaaggaacttgtaggtgctgaagaaaactat
ccaaaggtttcaagtgaaagtaaagatgctgcaaaccagacaaatacgactgttaaagag
gacagagatacagttgtgatgagcgacccttctggggagagcttagctgcttcttgcagc
ttacagatcaacaatctggatgatgtggttgactcagaagtgacaagtgccaattgtcta
tccctttgtgatgctcatggggggcaggtcagaactatgacagatgaactgaacatcaac
atggttacattaaacatcaccaaacaaagtattttgccagctgattcaagtgccagtgat
aagaatcaagtgtcatcatgtatagatcttgctcagaatgacattcatttgaacagtctg
agttttgctgttgagacagtagcaaaagactcgtcctcgtgtagcaagttgtctcttgac
aaagcacaggacggtcagaagttagatgagagttgtctttctaaatcaaagggcaaggag
acactggaagatgtgtgtttaaacgagacaaagagaaggcaggcattagaagaaaagttc
ttcagtaagactgagatgaggaagacatcagctgagattcaacttgataagggaaagcta
gatcagagagagaacacatctgcagaggttagtatgtggcattcatcagaagatgtggat
tctgcaggcgtaggtactgatggtcacaaggcaaggtgcaacaatgcaccgcaaggacat
caagaacatccaagtgcttcaccagcagaagtgacaggacatccacaaactcaagacttg
aacagagaaactttggaaggctgtacattaggcaatggaacaaatgcatcattgagcaag
gtcaaaaataaaacatcaagaataaatgctgcagccactttgtggggggacatgctgggg
aaagatttccaggaacaagagaaaagaggaagcagtaacacactcaaagcattgaacgga
caaagtaagaaaagtacattagataaagagaaccaacccttgatgactcattcgaataac
attggcaagcaaaagaccaaaatatcttcaggagcttgtgctgttgccaaactttggggc
gacatgctgggctcagattatggcgatgttaatgatagtgtggcagatgagacggtatca
aagtccagtaaacaacatagggagaggaaaccccaagcaaatagtgctgatagggtgtca
agagattctgaaaacatggagcagaacctggttcaggacacccaagaccagaaaggggag
tcaagaagagttaaagatggagaaaggaagcagatcaaaatggaacagttgtcttgggaa
agtgaactcgctttgtatgtggcagcacgtgcgaagatgaatgccagtaagtccaatgac
aaaggagaaaccaaggaaacagcagatgttttcataaggccacagaaacaagccaggaga
cgacttgcaggggtgaagaagagttctgcatcagaaaataatgagaaagcaaatagtgca
gagagcacaagaatatattgtgaagcagcacaaaataaagaggaattggaagaaaagatc
caaatgacagaaacgatatcagcaaaaatatctcccaccaggattgctaagaattgtctt
gataaagattcagtcagactggatcatttgccagacacaactgaaaatgaatctgctgct
gaaaccattgcaaaaaatatcctgaacagtcaagcaaaggagaaaacccaaacagcacct
gaagaaaaacagcagaccataaataacactatgacaggattggatggccagcagagttct
gtggtatccgaagaatcagatgcagccactttgggtagattgcagggtgttggctttaat
gatgatgattttagtgcagataattctaccagtcctcacaagcttatgtccatgaagagt
gtttcacaaaagaacaatctgcaggattttgaaaacagatcttcccatcatttggagacc
cctgggataagaagtatcttggccaggctgtcagcatcacactctacaaacttgactcat
aacgtgcacacctacagtgcagctctgcaggactattccctctttctggagcaggcttct
tcaattgacccaccttctgttctcaacattgtgaatgataccttccagtcttctagtgct
gtaccgtcagctgatgatttgaaaaagatttctgagtttcttcacaattttcatggagac
atacagcacagagtgttgtcagaaaatgtggttgcagcaggatctgaccttcagatttca
tcagttaaagaaaagggatttgataaggcaacacagactgactgtagtttctcacatgta
agcggtgttgaactaggacatagtggaatgttgacaccaaaatgtgaatcttgctcagct
gttgtcaagccgatcttggtcagtccagtggaacctattccttcagaatgctgtgatgat
aaaggcaaggtgaagaatgatgttcaaatcagccaaggtgaaatccaaacaaagatcact
tttcaaagggagagagagttgccagtcttgccttcattcagtccacctaaaggaacaaac
aaaccaaagcacgtggatagaaaaaacaaaattgccacatttcctgcagaagcaagtact
aaacatgaagaattgcctcagactattgctatgaacaaaatgaatgctgtaaagggacaa
ggcagcaaacttctgttaatgaaacacagaggtgatcagaaagaaagtgcaccaaacaaa
caagaacagccagttcaggaaggagcttgcggtacttcaaaaataggaaagaatttcttg
cataacatgcatacttctctgcagcttccagcaaagcagacgacaggttttctggagaca
gaagcagaggaatcttttgtctcaagcttggattcctcttcacccatctcttctgacaat
gaagaaacagaagcaacagctgcagaaaagccaaaagagagaaacacaggtttttacaaa
aaccgatatacagatgaacccgcagtgcctagggtaccaccatctcagatgagaggctca
gaaaacgatgagctggctcggaaacgccatggggcaggccgcaaaagtaaaaatttggtt
actgggtgccgacacaatgataccaaaagatctcatcagacttgtggtttctttacaaat
gaagtaaaccaataccttgatgccctgaacttttggcatgcctggtattaccaaaaacca
ggaggatactctaacattccggcacaagtaggtgactggaggagcccctatgcatcaggt
gcatcctttccacacttacattttccacacaatgacagcagagcagattggtttcattcc
aggtctgttccttgctctccagctgcctatagtccagagggtaagaattgtagacattct
cataaacctcaggatcctgccacattatatgtgcagtctatgtggtccagagccaagacc
cagcaggaatacataagacagatggttggcttttacaaggaaatgtctaaatcacaacct
tctttctttaaaaattcaaactag
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