Pomacea canaliculata (golden apple snail): 112572181
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Entry
112572181 CDS
T05881
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03018
RNA degradation
pcan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112572181
09123 Folding, sorting and degradation
03018 RNA degradation
112572181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112572181
03041 Spliceosome [BR:
pcan03041
]
112572181
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
112572181
mRNA degradation factors
5'-3' decay
Lsm complex
112572181
Spliceosome [BR:
pcan03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
112572181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
112572181
NCBI-ProteinID:
XP_025107537
LinkDB
All DBs
Position
LG9:complement(25546343..25549116)
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AA seq
96 aa
AA seq
DB search
MASALESYVNKMVSIVTADGRIIVGTLKGFDQTINLILDESHERVFSTTQGMEQVILGLY
IVRGDNVAVIGEVDEETDNNVDFDNIRAEPLNPVSH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagctttggaaagctatgtaaacaaaatggtgtctatagtcactgcagacgga
cggataattgtgggaacattgaaaggttttgaccagacaattaaccttattcttgatgag
agccatgaacgtgttttcagcaccacacaaggcatggagcaggtcatcttgggactatac
atagtgagaggagacaatgttgctgttattggtgaggtggacgaagagacagataacaat
gtagattttgataacattcgggcagaacctctcaaccctgtttcccactga
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integrated database retrieval system
