Pomacea canaliculata (golden apple snail): 112572263
Help
Entry
112572263 CDS
T05881
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
pcan
Pomacea canaliculata (golden apple snail)
Pathway
pcan03013
Nucleocytoplasmic transport
pcan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112572263
03015 mRNA surveillance pathway
112572263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcan03019
]
112572263
Messenger RNA biogenesis [BR:
pcan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
112572263
mRNA cycle factors
P-body specific factors
112572263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
112572263
NCBI-ProteinID:
XP_025107630
LinkDB
All DBs
Position
LG9:26633771..26659088
Genome browser
AA seq
1297 aa
AA seq
DB search
MDDRQTKSGEVIGGGRHRDRQVSNGKIEMKPPNRGAGDGPASVKENRESATARNVGPKEM
KNNAKNEENFRKQQHLGGEEEQQRKKEGEMNIQQEKETQEQQKMKAEEEQKRLADEEAAK
VKAEELKILEEYVAECGDKAKFKKELREANLTAAENRPDETFFSKLDSSLKKNTAFVKKL
RLLTESQKDSLAKDFSGLNLSKYVEEAASAIAEAKLKMSDVHCAVYLCSLIHQRYASFAT
FLLENFQKYHLTKKDEGKMSNPSKYRVDLRFFGELVSVGVFREKEGLPVLASQLQLLVGN
DREEHNHLSILISFCRHCGDDYMGLVPRKIRLLAEKNNIELPRSQLLPPERQKACRALLR
EYFVSLVRHVTNDQQTLKTLERQNRKIMQTKGELSQERREAYEAAHSAFHKLHSNAIVLA
DLLDEDMPEFPSEDAAEEGGNNFDIFNPLKDAEFQYEGDSNLFEDDDTRCFYENLPDLRA
VIPGILYKDSEHSSTKDGVKESDTALEDDLGQLEVEEVEKEMETARIEESMKEAEAQNGG
HVEEALDETPIIPPEAEEEDSETGSLMKQQFDAFLLSLPNCVNRDLIDKAAVEFCMNFNT
KINRKKLVRALFTVHRTRYDLLPFYARLVATLYPCMPDVANELVQYVKSDLRWHIRKKDQ
INIESKLKTVRFLGELVKFKMCPKSEALHCLKMLMFDFSHHNIEMACALLETCGRFLYRS
PDSHYRTKVYLDVMMRKKVALHLDSRYETMVENAYFYSNPPDTAQTGRPERPPMHNYIRR
LLYKDLSKITTEKVLRQMRKLNWDDPEIAFYATKCLTAVWNIRFNSIHCAANLLAGIAPY
HEHVAIQVVDGVLEDIRLGMEINHPKFNQRRVSCIKYLGELYNYRMVESAVIFKVLYSLI
TFGVSLDASASHPLDPPEHLLRLRLVCVLLDTCGQYFDKGSSKKKLDCFLTFFQRYYWFK
KSLSVWKEDHPFPVDLENMQHDTFEAIRPKTRLFSSLDEAQEAVQVIQDEYKAKIAGLLP
IVEEDLEAEDECEEASSIAENEEDEELSQNLSQVRLTDGSGTQDSDPSQEEESGLSTGSQ
EREIEDGQESEDFDENDTLDSAGEDGHEDKVTVLSGRPKLVPCPEDEDFLAAFDKMMAEN
IQMRTQESLKVPQLDIAVPMHLRGKNKKSVGVTCPLSLGGPAPAPAPAPAKEEENTVSFV
LMTRRGNKQQLTNLEVPVTACFATKFREREEAERMEKERMKQMVLNIHERQEEEDYQEML
ASLNRSPPSNLNRERRVRYQHPKGAPDADLIFGSGPK
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagacagacaaaaagtggagaggttattggaggaggaaggcacagagaccgg
caagtcagcaatggaaaaatagagatgaaaccgccaaacagaggagcaggagatggacca
gccagcgtcaaggaaaatcgagaaagtgccacagccagaaatgtgggaccgaaagaaatg
aaaaataatgccaagaatgaagaaaactttagaaaacaacagcatcttggtggggaggag
gagcagcagagaaagaaggaaggagaaatgaacattcaacaagagaaagaaacacaggag
cagcaaaagatgaaagcagaggaagaacaaaaaagattagcagatgaagaggcagctaaa
gtgaaggcagaagaacttaaaattctggaagaatatgttgctgaatgtggagataaagca
aaattcaaaaaggagttaagagaggcaaacctaacagctgcagagaatcgtcctgatgaa
actttcttctcaaagctggattctagcctgaagaaaaacactgcatttgtcaaaaaactg
cgtttgctgacagagagccagaaagacagtctggctaaggatttcagtggtcttaatctt
agcaaatatgtggaagaagctgcttccgccattgcagaagcaaagctaaaaatgtcagat
gtgcattgtgcagtctacttatgcagtttaatacatcaacgctatgcttcttttgccaca
tttctgctggagaacttccagaaataccacttaacaaaaaaagatgagggcaagatgagt
aaccctagcaagtatcgtgtggacctacgcttctttggggagttggtgtcagtgggagtc
tttcgtgagaaggagggtttgccagtcctggccagtcagctacagttactggtgggtaat
gaccgagaagaacacaaccacctgagcattctcatctccttctgccggcattgtggggat
gactatatgggtcttgttcccagaaaaattaggttacttgctgaaaagaataacattgaa
ctgccaagaagtcagcttttgccaccagaaagacaaaaagcatgtcgagcgctgttaagg
gaatactttgtgtcgcttgtgcgtcatgtcaccaatgatcagcagactctcaaaaccctg
gagcgccagaatcgcaaaattatgcagactaaaggtgagctcagtcaagaacgacgagag
gcatatgaagcagctcatagtgcatttcacaagcttcattcaaacgctattgttttagct
gatctgctggatgaagacatgccagagtttccaagtgaagatgcagcagaagaaggagga
aataactttgacatttttaaccctctcaaagatgctgagttccagtatgagggcgattca
aacttgtttgaagatgatgacacgaggtgtttttatgaaaatttgccagatctgagagcc
gtcatacctgggatcctgtacaaagatagtgaacattcatcaaccaaagatggagtgaag
gagtctgacactgcactggaagatgacttggggcaactagaggtagaggaagtggagaaa
gagatggagacagcacgcattgaagagagcatgaaggaggcagaggcccagaatggagga
cacgtagaagaggcactagatgagactcccattattcctcctgaggctgaagaggaagac
tcagagactggcagcctgatgaagcagcagtttgatgcattcctcctttctcttcctaat
tgtgtcaatcgtgacctaattgacaaggcagccgtggagttttgtatgaacttcaacaca
aaaatcaacagaaagaagctggtgcgagctctgttcacagtccatcgaacaaggtatgat
ctgctaccattttatgctcggctggtggcaactttgtacccttgcatgcctgatgttgca
aatgagttggtgcagtatgtcaagagtgaccttcgctggcacataaggaaaaaagatcag
atcaatattgagtccaaattgaagacagttcgctttcttggtgagctagtcaagttcaag
atgtgtccaaagagtgaagccctgcactgtttaaagatgctgatgtttgatttttcacac
cacaacatagagatggcgtgtgctcttttggaaacttgtggccgttttctgtatcgttca
cccgactctcactacagaaccaaagtctacctggatgttatgatgaggaaaaaggtagca
cttcatctagattctcgttatgagacaatggtggagaatgcttacttctacagtaatcct
ccagatactgctcagacaggtcgaccagaacggcccccaatgcacaactacatccgacgc
ctgttgtacaaagacctctcaaagattaccacagagaaggttttaaggcaaatgagaaag
ctaaattgggatgacccagagattgctttttatgcaacaaaatgtttgacagcagtttgg
aatatccgtttcaactccatacactgtgccgcaaatctcttagctggcattgcaccctac
catgagcatgtggctattcaagtggtggatggagtccttgaagacatcagactgggtatg
gagatcaatcatccaaagtttaatcaacgaagagtcagttgcatcaagtatttgggtgaa
ctgtataattaccgtatggtggaatcagctgttattttcaaagtcctttactctctcatt
accttcggtgtttctcttgacgcctcggcttcccacccactggaccctccagagcaccta
ctgcgcctgcgtctagtctgtgttctgctggacacgtgtggccagtactttgacaagggg
tcaagtaagaagaagctggactgttttctaaccttttttcagcgatactactggttcaag
aaatcactgtcagtctggaaagaagatcatccctttccagtagatttggagaacatgcag
catgatacatttgaagctataagacccaaaacacgtctcttctctagtctggacgaggct
caggaagctgtgcaggttatccaagatgagtataaagccaaaatagctggcctgctgcca
attgtagaggaggaccttgaggcagaagatgaatgtgaagaggcatcaagcatagctgag
aatgaggaagatgaagaactgtcacaaaatttgtctcaggttcgacttacagatggttca
ggtacacaggatagtgaccccagccaggaagaagagtcagggctgagtactggaagtcaa
gagagagagattgaagatggtcaagagtcagaagactttgatgagaatgacaccttggac
tctgcaggtgaagatggccatgaggacaaggtaacagttttatctggtcggccaaaacta
gttccatgtcctgaagatgaggatttcttggcagcgtttgacaagatgatggcagaaaac
atccagatgagaacacaagagtcgctgaaggtacctcagctggacattgctgtacctatg
cacctccgcggtaaaaataaaaaatcagttggagttacctgtcctttatcacttggtggc
ccagctccagcaccagcaccagcaccagccaaagaagaagaaaataccgtcagctttgtg
ctgatgacaagacgcggcaataaacagcagctgaccaacttagaggtaccagtcacagcc
tgttttgccacaaagtttagagagcgagaagaggctgaacgtatggagaaagagaggatg
aagcagatggtcctaaatattcatgaacgccaggaagaggaagactatcaagaaatgttg
gcatcactaaatcgatcacctccatccaacctgaaccgtgagcgcagagttcgctaccag
catccaaaaggagcacccgatgcagatctgatctttggctcaggcccaaaataa
DBGET
integrated database retrieval system
